Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F17 I0 R1 115 121.7 2441348 96.4% 2353459 231.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,201,252 A→C 10.0% T230P (ACG→CCG)  yjaH → DUF1481 family putative lipoprotein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,201,2520AC10.0% 433.2 / 2.2 149T230P (ACG→CCG) yjaHDUF1481 family putative lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (79/49);  new base C (2/19);  total (81/68)
Fisher's exact test for biased strand distribution p-value = 6.68e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 153 total aligned reads displayed.

CGTCAGGGGAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACC  >  NC_000913/4201015‑4201490
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                
cGTCAGGGGAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGaaaaa                                                                                                                                                                                                                                                 >  2:15939/1‑238 (MQ=255)
   cAGGGGAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGtt                                                                                                                                                                                                                                              <  2:871449/239‑1 (MQ=255)
   cAGGGGAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGt                                                                                                                                                                                                                                               <  1:1093410/238‑1 (MQ=255)
    gggggAGAGCCGAGCGGGCGCAGGGGCGAAGGCATACGATGGAGGAGACCGTGACCCCCTGCGAAGCGCAACCAAATAAAGCAGAGTTGGAGTCGAAGCCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTTATCTCAGCGTTTCATCGCTGGAAG‑CGCCCGAAGGTACGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAATCCAACGAGAAAACGtt                                                                                                                                                                                                                                              <  2:344416/237‑1 (MQ=255)
     ggggAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGt                                                                                                                                                                                                                                               >  2:689643/1‑236 (MQ=255)
     ggggAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGt                                                                                                                                                                                                                                               >  1:231218/1‑236 (MQ=255)
     ggggAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGt                                                                                                                                                                                                                                               >  1:20991/1‑236 (MQ=255)
       ggAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑c                                                                                                                                                                                                                                            <  1:472719/236‑1 (MQ=255)
       ggAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑c                                                                                                                                                                                                                                            <  2:907186/236‑1 (MQ=255)
       ggAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑c                                                                                                                                                                                                                                            <  1:964159/236‑1 (MQ=255)
          gagTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGGTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGAtt                                                                                                                                                                                                                                       <  1:235859/238‑1 (MQ=255)
           agTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGAttt                                                                                                                                                                                                                                      >  1:1036514/1‑238 (MQ=255)
           agTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCAGGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAACCGTT‑CTGAttt                                                                                                                                                                                                                                      >  1:663760/1‑238 (MQ=255)
             tCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTAcc                                                                                                                                                                                                                                   >  2:826571/1‑239 (MQ=255)
               gTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCa                                                                                                                                                                                                                                  <  2:396193/238‑1 (MQ=255)
               gTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAg                                                                                                                                                                                                                                 <  1:570140/239‑1 (MQ=255)
               gTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAg                                                                                                                                                                                                                                 <  1:650962/239‑1 (MQ=255)
                tgctgcGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGCAG‑CGCCCGACGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGt                                                                                                                                                                                                                                >  2:1067249/1‑239 (MQ=255)
                ctgtgcGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTTCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAg                                                                                                                                                                                                                                 <  2:1177935/235‑1 (MQ=255)
                 gctgcGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCATGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGt                                                                                                                                                                                                                                <  1:263227/238‑1 (MQ=255)
                 gctgcGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGt                                                                                                                                                                                                                                <  1:758005/238‑1 (MQ=255)
                 gctgcGCATGGGGCGGTTGCATGCGATGGAACAGACCGTGAACGCCTGCGAAGGGCAAGCCATTAGTCCTGATGTACATTCGTAGGCGATTGCGCATATCGGGCGCCGCCAGAGCCGCGCTTCTGTGGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGATAAAACGTT‑CTGATTTACCAGt                                                                                                                                                                                                                                <  2:1123045/238‑1 (MQ=255)
                     cgcCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGcc                                                                                                                                                                                                                           <  2:541719/238‑1 (MQ=255)
                      gcCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGccca                                                                                                                                                                                                                         <  1:97649/239‑1 (MQ=255)
                      gcCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGccc                                                                                                                                                                                                                          <  1:689643/238‑1 (MQ=255)
                        cAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGcccata                                                                                                                                                                                                                       <  1:826571/239‑1 (MQ=255)
                          ggggCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGcccatac                                                                                                                                                                                                                      >  1:363489/1‑238 (MQ=255)
                          ggggCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGcccatac                                                                                                                                                                                                                      >  1:908996/1‑238 (MQ=255)
                                cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATCCCCATATg                                                                                                                                                                                                               >  2:566721/1‑239 (MQ=255)
                                cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGCAAG‑CGCCCGAATGTTCGCACTTACTGTTCGTGGCAAACTCTGATTTCCGTCGCCGGCAACCCAACGAGAAACCGTC‑CTGTTTTACCAGT‑GGCGCATCCCCatat                                                                                                                                                                                                                >  2:1125963/1‑238 (MQ=255)
                                      tGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGcc                                                                                                                                                                                                         <  1:251592/239‑1 (MQ=255)
                                             gAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCaccacc                                                                                                                                                                                                   >  1:1070726/1‑238 (MQ=255)
                                             gAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCaccacc                                                                                                                                                                                                   >  1:149742/1‑238 (MQ=255)
                                                cAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCa                                                                                                                                                                                                >  1:36048/1‑238 (MQ=255)
                                                   aCCGTGACCACCTGCGCAGGTCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCGCTTCTGTTGATGTCAGCGTTGCATGGCTGGAAG‑AGCCCGACGGTTCTCAAGTACTGTTAGTGGGAAGTTCTGATTTCTGTCGCTGGCACCCCAACGAGAAAACGTC‑CTGACTTATCAGT‑TGCCCATACCCATCTCACCGCACACACCGCAccc                                                                                                                                                                                             >  2:625658/1‑238 (MQ=255)
                                                     cGTGACCACCTGGGAAGGGCAAACCATAAACCCTGATTTAGATGCGCGGGCGATAGCGCATATCGGGCGCCGCCAGGGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAGG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAgccgcc                                                                                                                                                                                          <  2:1092436/239‑1 (MQ=255)
                                                     cGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAgccgc                                                                                                                                                                                           >  2:300790/1‑238 (MQ=255)
                                                      gTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTCCCAGT‑GGCCCATCCCCATATGACCGCCACCACCGCAGccgccg                                                                                                                                                                                         <  1:15939/239‑1 (MQ=255)
                                                        gACCACCTGCGGAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCATCCGCCGt                                                                                                                                                                                        >  2:372789/1‑238 (MQ=255)
                                                        gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAg                                                                                                                                                                                                                                 <  1:730286/198‑1 (MQ=255)
                                                        gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAg                                                                                                                                                                                                                                 >  2:730286/1‑198 (MQ=255)
                                                        gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTa                                                                                                                                                                                       >  1:73200/1‑239 (MQ=255)
                                                            accTGCGAGGGGCAACCTATAAACCCTGAGTTCGATCACGGGGCAATGGCGCTTTTCGGACGCCGCCAGGCCCGCTTTTCTGTAGATCTAAGCGTGGCTTGGCTGGAGC‑CGCCCGAAGGTTCGCAATTCGTGTTAGTGGAAAACTCTGATTTCTGTCCCTGGCAACCCAACGAAAAAACCTT‑CTGATTTACCAGT‑GCCCCATACCCAAGTGACCGCCACCACCGCAGCCGCCGTAgccc                                                                                                                                                                                   <  2:1105550/239‑1 (MQ=255)
                                                             ccTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGCAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGACgccca                                                                                                                                                                                  >  1:624265/1‑239 (MQ=255)
                                                             ccTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAgccca                                                                                                                                                                                  >  1:124718/1‑239 (MQ=255)
                                                                  gAAGGGCAAACCATGAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTTTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCAAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAgcccatgcc                                                                                                                                                                              <  1:441400/238‑1 (MQ=255)
                                                                           aCCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGc                                                                                                                                                                     >  1:964088/1‑238 (MQ=255)
                                                                                tAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCGGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑ATGATTTACCAGT‑GGCCCATACCCCTATGACCGCCACCACCGCAGCCGCCGAAGCCCATGCTCATTCCGGCACcgc                                                                                                                                                                >  2:898094/1‑238 (MQ=255)
                                                                                       gATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGTTGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGGTTTCTGTCGCTGGCACCCCAACGAGACAACGGG‑CTGATTTACCAGT‑GGCCCATACCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGACCATTCCGGTTCCGCGCGGAAt                                                                                                                                                         >  2:945392/1‑238 (MQ=255)
                                                                                       gATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAAt                                                                                                                                                         >  2:822393/1‑238 (MQ=255)
                                                                                              attcgcgggggagagcgctgtctgAGCGCCGCAGGGGCCACTCTGCTGTTTATGTCAGCGTGGCATGGC‑GGAAGTCCCCCGAAGGTTCACAATTACTGTTAGTGGCAAACTCTGATTCCGGCCCCTGCCAACCAAACGAAAAACCGTC‑CGTATTTCCCAGT‑GGCCCATCCCCCTATGGCCGCCCCCACCGCCGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCtt                                                                                                                                                 <  2:1220306/216‑1 (MQ=255)
                                                                                                  gCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGCTTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAg                                                                                                                                              >  1:480053/1‑238 (MQ=255)
                                                                                                  gCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGGATACACGCttacg                                                                                                                                              >  1:611844/1‑235 (MQ=255)
                                                                                                  gCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGAGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCACACTCTGATTTCTGTCGCGGGCAACCCAACGTGAAAACGTT‑CTGATTTCCCAGT‑GGCACATACCCATATGACCGCCACCACCGCATCCGCCGTATCCCACGCCCATTCCTGCTCCTCGCGGAATACCCGCTTctg                                                                                                                                              >  2:934195/1‑236 (MQ=255)
                                                                                                                  atCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACACAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGAAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGACTCAGCCATCGACATATCTCGt                                                                                                                             >  2:436835/1‑239 (MQ=255)
                                                                                                                   tCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCGGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGtt                                                                                                                            <  1:883173/239‑1 (MQ=255)
                                                                                                                    ggcgcgcggccaggtcgtctctTCTGTTGATGTCGGGGGGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTCCTGTTAGTGGCAAACTTGGATTTCTGCCGCTGGCAACCCACCGAGAAACCGTC‑CTGATTTACCAGT‑GGCCCACCCCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGttt                                                                                                                           <  2:1137550/221‑1 (MQ=255)
                                                                                                                      aGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCCTTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTc                                                                                                                          >  1:578703/1‑238 (MQ=255)
                                                                                                                        cgccgcCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAg                                                                                                                                              >  1:894982/1‑216 (MQ=255)
                                                                                                                        cgccgcCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCAc                                                                                                                        >  1:1137550/1‑238 (MQ=255)
                                                                                                                         ccggccggggcgcgtttttggTTGATGTCGGCGGGGGCTGGCTGAAGG‑CGCGCAAGGGTCCGCAATTACGTTTGGTGGCAACCTCTGTTTTTTGTCGCTGGCACCCCACCGAGAAACCTTT‑CGGATTTCCCAGT‑GCCCCTGCCCCATATACCCGCCCCCACCGCAGCCGCCGTCGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCAcc                                                                                                                       <  2:962652/218‑1 (MQ=255)
                                                                                                                                  gCCGCTCTTTGGTTTATGTCAGCGTGGCATGGCTGGAAG‑CCCCCGAAGGTTCGCAATTACTGTTAGGGGCAAACTCTGATTTCTGCCGCTGCCACCCAACCGAAAAAACGTC‑CTGTTTTACCAGT‑GCCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACt                                                                                                                <  2:1036514/236‑1 (MQ=255)
                                                                                                                                  gCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCACCCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACt                                                                                                                <  1:533027/236‑1 (MQ=255)
                                                                                                                                     gCTCTTCTGTTGGTGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCCCAGCAACCGCCCTAACCCATGCCCATTCCGGCTCCGCACGCAATACCCGCTTCCGCCCACCCGCTATCTCGTTTACCCCTTAACTCATcg                                                                                                           >  2:154977/1‑237 (MQ=255)
                                                                                                                                                  ctcatgctgggaggcgCTGAACG‑CGCCCGAAGTTCCACATATACTGTTAGTGGCAAACTCTGATTTCTCGCGCAGGCAACCCACCAACAAACCGTC‑CGGATTTACAAGT‑GCCCAACCCCCATAGGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCa                                                                                              <  2:578703/223‑1 (MQ=255)
                                                                                                                                                   ttgaGCTTGACAAGGCCGGAAG‑CCCCCCACGGGTCGAAATTACTGTGAACGGCACAATCTGATTTCTGTCGCTGGCAAACCATCGAGAAAACGTT‑TTAATTTAGCAGT‑GGCCAATATCCATATGACCACCACCACCGCAGCCGCCGTAGCCCATGCCCGTTCCGGCTCCCCCTGACATACCCGCTTACGCCACCGCGCTCTATCGTTTCCCCCGAAACTCATCGACCGACtaccgccaa                                                                                            >  2:747629/4‑231 (MQ=255)
                                                                                                                                                   gccaggggggCATGGTGGGAGG‑CCCCCGAGGGTTCGCAATTCCTGTTGTTGCAAAATTTTGATTTCTGCCGCCGGAAACCCAACGAGAAACCGTT‑CTGATTTACCAGT‑GCCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                            <  2:908996/231‑1 (MQ=255)
                                                                                                                                                   gaccgCGGGGAATGGCGGGAAC‑CGCCCAAAGGTTCAAAATTACGTTTAGTGGCAAACTTTTATTTCTGCCCCTGCAAACCCAACGACAAACCGTT‑CTATTTTCCCAGT‑GCCCCATCCCCATAGGCCCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                            <  2:36048/235‑1 (MQ=255)
                                                                                                                                                   gTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGCGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                            >  1:768182/1‑239 (MQ=255)
                                                                                                                                                   gTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                            <  1:822393/239‑1 (MQ=255)
                                                                                                                                                      aGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAAtt                                                                                          >  2:444303/1‑238 (MQ=255)
                                                                                                                                                      aGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAAt                                                                                           >  2:14587/1‑237 (MQ=255)
                                                                                                                                                        cGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGCGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGCCGCAAATtct                                                                                        >  1:54487/1‑238 (MQ=255)
                                                                                                                                                        cGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATtct                                                                                        >  1:660611/1‑238 (MQ=255)
                                                                                                                                                                     gAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCCGCCATCGCGATCTCTCGTTTCACCCGTAACTCATCTCACGCCTGCCGCACATTCTCCATCTCTTTAGc                                                                           >  2:591309/1‑238 (MQ=255)
                                                                                                                                                                      gaG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAACTTCTCCATCTCTTTGGCg                                                                          >  2:742672/2‑238 (MQ=255)
                                                                                                                                                                       aG‑CGCCCGAGGGTCCCCAATTACTGTAAGTGGAAAACTCGAATTTCTGTCCCTGCCAACCCACCGAGAAACCGTT‑CTGATTCCCCGGT‑GGCCCATACCCAGATCACCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGAc                                                                        <  2:611844/239‑1 (MQ=255)
                                                                                                                                                                            cccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACcgcg                                                                    >  2:1133220/1‑239 (MQ=255)
                                                                                                                                                                                aaGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTaa                                                                >  1:160886/1‑239 (MQ=255)
                                                                                                                                                                                      cGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAAtttt                                                            >  1:743242/1‑237 (MQ=255)
                                                                                                                                                                                       gCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCACCCCAACGAGAAACCGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTtgct                                                         <  1:188703/239‑1 (MQ=255)
                                                                                                                                                                                         aaTTCCTGTTAGTGGCAAACTCTTATTTCTGCCGCTGGCAACCCAACGAGAAACCGTT‑CTGATTTCCCAGT‑GCCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTtgctgc                                                       <  1:436835/239‑1 (MQ=255)
                                                                                                                                                                                                   aGTGGCAAACTCTGATTTCTGTCGCTGGCCACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGACTCCGCGCGGAATACCCGCTTCAGCCATCGCGATCTCTCGTTTCACCCGTAACTCATCTAAGGACTGACGCCAATTTCCCATCTCTTTGGCGACCCCGTTAATTTTCCCTCCATCAGGTgg                                             >  2:1184385/1‑239 (MQ=255)
                                                                                                                                                                                                   aGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCCGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTgg                                             >  2:122081/1‑239 (MQ=255)
                                                                                                                                                                                                     tGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAACTTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGt                                           >  1:385946/1‑239 (MQ=255)
                                                                                                                                                                                                        cAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTc                                         >  2:701516/1‑238 (MQ=255)
                                                                                                                                                                                                         accgcggcttccccgccccgtgCAACCCAAC‑CGAAAACCCT‑CTGTATTTCCAGTCGCCCCAGACCCAACTGACCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTcgc                                       <  2:6703/218‑1 (MQ=255)
                                                                                                                                                                                                         aaaCTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTCACGACTGACGCAAATTCTCCCTCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGTGTTcgc                                       >  1:698829/1‑239 (MQ=255)
                                                                                                                                                                                                          aaCTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTcgcg                                      <  1:1125963/239‑1 (MQ=255)
                                                                                                                                                                                                            cccggATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTCCCAGT‑GGCCCATCCCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGc                                    <  1:1191713/235‑1 (MQ=255)
                                                                                                                                                                                                              ctGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTa                                  <  1:300790/239‑1 (MQ=255)
                                                                                                                                                                                                                  gttCTGTCGTTGGCACCCCACGGAGAAACCGTC‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACa                               <  1:1172703/237‑1 (MQ=255)
                                                                                                                                                                                                                      ggTCGCTGCCACCCCAACGAGAAACCGTT‑CTAATTTCCCAGT‑GCCCCATCCCCATATCACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCa                          <  2:660611/238‑1 (MQ=255)
                                                                                                                                                                                                                       gTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGCTTCGCGGCTAACAGGGCAt                         >  1:101410/1‑239 (MQ=255)
                                                                                                                                                                                                                        gccccggccaagccaaagaaaaaCGTTGCTGATTCACCGGG‑CCCCCATACCCCAATGCCCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAGCTCATCTAACGACTGACGCAAATGCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAt                         <  2:385946/220‑1 (MQ=255)
                                                                                                                                                                                                                         cgatGGCAACCCAACGAGAAAACGTA‑CTGATTTACCAGT‑GCCCCATACCAATAGGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAtt                        <  1:934808/235‑1 (MQ=255)
                                                                                                                                                                                                                          gCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGt                      <  1:399183/239‑1 (MQ=255)
                                                                                                                                                                                                                          ccTGACACCCCAACGAGAAAACGTT‑CTGTTGTCCCAGT‑GGCCCATCCCCTAATGCCCGCCACCACCTCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGt                      <  2:1070726/238‑1 (MQ=255)
                                                                                                                                                                                                                              gCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAAGGCATTGTAtt                   <  1:903083/238‑1 (MQ=255)
                                                                                                                                                                                                                                              aCGTT‑TTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCAcc  <  1:749655/239‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                
CGTCAGGGGAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACC  >  NC_000913/4201015‑4201490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A