Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F17 I0 R1 115 121.7 2441348 96.4% 2353459 231.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,201,277 A→C 18.8% G137G (GGT→GGG)  zraP ← Zn‑dependent periplasmic chaperone

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,201,2770AC18.8% 260.3 / 8.5 122G137G (GGT→GGG) zraPZn‑dependent periplasmic chaperone
Reads supporting (aligned to +/- strand):  ref base A (67/26);  new base C (2/25);  total (70/52)
Fisher's exact test for biased strand distribution p-value = 1.13e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 129 total aligned reads displayed.

CAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCTTT  >  NC_000913/4201039‑4201515
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                              
cAGGTGCTCTGGCATGCGATGGAACCGGCCGTGACCACCGTCGAAGGGCAAACCATTAACCCTGATTTAGATTCGCAGGCGATAGCT‑CATAGCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATGTACCAGT‑GGcccata                                                                                                                                                                                                                                                <  2:645401/239‑1 (MQ=255)
cAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGcccata                                                                                                                                                                                                                                                <  1:826571/239‑1 (MQ=255)
  ggggCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGcccatac                                                                                                                                                                                                                                               >  1:363489/1‑238 (MQ=255)
        cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATCCCCATATg                                                                                                                                                                                                                                        >  2:566721/1‑239 (MQ=255)
        cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATg                                                                                                                                                                                                                                        >  2:399183/1‑239 (MQ=255)
        cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGCAAG‑CGCCCGAATGTTCGCACTTACTGTTCGTGGCAAACTCTGATTTCCGTCGCCGGCAACCCAACGAGAAACCGTC‑CTGTTTTACCAGT‑GGCGCATCCCCatat                                                                                                                                                                                                                                         >  2:1125963/1‑238 (MQ=255)
              tGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGcc                                                                                                                                                                                                                                  <  1:251592/239‑1 (MQ=255)
                     gAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCaccacc                                                                                                                                                                                                                            >  1:1070726/1‑238 (MQ=255)
                     gAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCaccacc                                                                                                                                                                                                                            >  1:149742/1‑238 (MQ=255)
                           aCCGTGACCACCTGCGCAGGTCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCGCTTCTGTTGATGTCAGCGTTGCATGGCTGGAAG‑AGCCCGACGGTTCTCAAGTACTGTTAGTGGGAAGTTCTGATTTCTGTCGCTGGCACCCCAACGAGAAAACGTC‑CTGACTTATCAGT‑TGCCCATACCCATCTCACCGCACACACCGCAccc                                                                                                                                                                                                                      >  2:625658/1‑238 (MQ=255)
                             cGTGACCACCTGGGAAGGGCAAACCATAAACCCTGATTTAGATGCGCGGGCGATAGCG‑CATATCGGGCGCCGCCAGGGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAGG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAgccgcc                                                                                                                                                                                                                   <  2:1092436/239‑1 (MQ=255)
                             cGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAgccgc                                                                                                                                                                                                                    >  2:300790/1‑238 (MQ=255)
                               tGACCACCTGCGAAGGGCCAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGt                                                                                                                                                                                                                 >  1:509741/1‑239 (MQ=255)
                                gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTa                                                                                                                                                                                                                >  1:73200/1‑239 (MQ=255)
                                gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGAGATAGCG‑CATATCGCGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAA‑CGCCCGACGGTTCGCACTTACTGTTAGTGGCAAGCTCTGATTTCTGTCGCTGGCAACCCAACCAGAAAACGTT‑CCGAGTTACCAGT‑GGCACCTTCCCAACTAACCCCAACCACCGCAgccgactta                                                                                                                                                                                                                >  2:605638/1‑234 (MQ=255)
                                   acctggCGAAGGGCAATACATTAATCCGGATATAGATTCGTAGGGGAGAGCG‑CATATAGAGCGCCGCTAGGGCCGCTATTCTGTGGGTGTCGGCGGGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGGGGGAAACTCTGATTTCGGTCGCTGGAACCCCAACGAAAAAACTTT‑CTGATTTCACAGT‑GGCCAATACCCATATGACCGCCACCACCGCAGCCGCCGTAgcc                                                                                                                                                                                                             <  2:1130210/234‑1 (MQ=255)
                                    accTGCGAGGGGCAACCTATAAACCCTGAGTTCGATCACGGGGCAATGGCG‑CTTTTCGGACGCCGCCAGGCCCGCTTTTCTGTAGATCTAAGCGTGGCTTGGCTGGAGC‑CGCCCGAAGGTTCGCAATTCGTGTTAGTGGAAAACTCTGATTTCTGTCCCTGGCAACCCAACGAAAAAACCTT‑CTGATTTACCAGT‑GCCCCATACCCAAGTGACCGCCACCACCGCAGCCGCCGTAgccc                                                                                                                                                                                                            <  2:1105550/239‑1 (MQ=255)
                                     ccTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGCAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGACgccca                                                                                                                                                                                                           >  1:624265/1‑239 (MQ=255)
                                     ccTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCCGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAgtcc                                                                                                                                                                                                            >  2:1057363/1‑238 (MQ=255)
                                     ccTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAgccca                                                                                                                                                                                                           >  1:124718/1‑239 (MQ=255)
                                          gAAGGGCAAACCATGAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTTTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCAAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAgcccatgcc                                                                                                                                                                                                       <  1:441400/238‑1 (MQ=255)
                                                        tAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATTCCCATTCCGGcgccgc                                                                                                                                                                                         >  2:1191713/1‑238 (MQ=255)
                                                          acccTGTTTAAGATCCGCGGGCGA‑AGCGCCATACCGAGCCCCCCCAGGCCCGCCTTTTTGTGGATGTCAGCGGGGCATGGCTGGAAG‑CGCCCGAATGTTCGCAATTACTTTAAGTGGCAACCTCTGATTTCTTCCGCGGGCAACCCACCGAAAAACCGTT‑CTGATTTCCCAGT‑GCCCCATCCCCAAATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCcgcgcg                                                                                                                                                                                      <  2:845465/237‑1 (MQ=255)
                                                               gATTTAGATTCGCTGGCGATAGCG‑CATATCGCGCGCCTCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCCAAATCTGATTTCTGTCGCTGGCACCCCAAAGAGACAACGTT‑CTGATTCACCATT‑GGCCTATACCCATATCACCGCCACCACCGCAGCCGCCGTCACCCAAGCCCATTCCCGCTCCGCCCGGaac                                                                                                                                                                                  >  2:149372/1‑237 (MQ=255)
                                                               gATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGTTGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGGTTTCTGTCGCTGGCACCCCAACGAGACAACGGG‑CTGATTTACCAGT‑GGCCCATACCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGACCATTCCGGTTCCGCGCGGAAt                                                                                                                                                                                  >  2:945392/1‑238 (MQ=255)
                                                               gATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAAt                                                                                                                                                                                  >  2:822393/1‑238 (MQ=255)
                                                               gATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCAAGCCCATTCCGGCTCCGCCCGGAAt                                                                                                                                                                                  >  1:416368/1‑238 (MQ=255)
                                                                 tttAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTTTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATCCCGGCCCCGCGCGGAATAc                                                                                                                                                                                >  1:909100/1‑238 (MQ=255)
                                                                       attcgcgggggagagcgctgtctgAGCGCCGCAGGGGCCACTCTGCTGTTTATGTCAGCGTGGCATGGC‑GGAAGTCCCCCGAAGGTTCACAATTACTGTTAGTGGCAAACTCTGATTCCGGCCCCTGCCAACCAAACGAAAAACCGTC‑CGTATTTCCCAGT‑GGCCCATCCCCCTATGGCCGCCCCCACCGCCGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCtt                                                                                                                                                                          <  2:1220306/216‑1 (MQ=255)
                                                                          gCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGCTTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAg                                                                                                                                                                       >  1:480053/1‑238 (MQ=255)
                                                                          gCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGGATACACGCttacg                                                                                                                                                                       >  1:611844/1‑235 (MQ=255)
                                                                                         atatCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATAtctc                                                                                                                                                        >  1:1142213/1‑239 (MQ=255)
                                                                                           atCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGt                                                                                                                                                      >  1:379822/1‑239 (MQ=255)
                                                                                            tCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCGGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGtt                                                                                                                                                     <  1:883173/239‑1 (MQ=255)
                                                                                             ggcgcgcggccaggtcgtctctTCTGTTGATGTCGGGGGGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTCCTGTTAGTGGCAAACTTGGATTTCTGCCGCTGGCAACCCACCGAGAAACCGTC‑CTGATTTACCAGT‑GGCCCACCCCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGttt                                                                                                                                                    <  2:1137550/221‑1 (MQ=255)
                                                                                               aGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCCTTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTc                                                                                                                                                   >  1:578703/1‑238 (MQ=255)
                                                                                               aGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTc                                                                                                                                                   >  1:702583/1‑238 (MQ=255)
                                                                                                 cgccgcCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAg                                                                                                                                                                       >  1:894982/1‑216 (MQ=255)
                                                                                                 cgccgcCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCAc                                                                                                                                                 >  1:1137550/1‑238 (MQ=255)
                                                                                                  ccggccggggcgcgtttttggTTGATGTCGGCGGGGGCTGGCTGAAGG‑CGCGCAAGGGTCCGCAATTACGTTTGGTGGCAACCTCTGTTTTTTGTCGCTGGCACCCCACCGAGAAACCTTT‑CGGATTTCCCAGT‑GCCCCTGCCCCATATACCCGCCCCCACCGCAGCCGCCGTCGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCAcc                                                                                                                                                <  2:962652/218‑1 (MQ=255)
                                                                                                           gCCGCTCTTTGGTTTATGTCAGCGTGGCATGGCTGGAAG‑CCCCCGAAGGTTCGCAATTACTGTTAGGGGCAAACTCTGATTTCTGCCGCTGCCACCCAACCGAAAAAACGTC‑CTGTTTTACCAGT‑GCCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACt                                                                                                                                         <  2:1036514/236‑1 (MQ=255)
                                                                                                              gCTCTTCTGTTGGTGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCCCAGCAACCGCCCTAACCCATGCCCATTCCGGCTCCGCACGCAATACCCGCTTCCGCCCACCCGCTATCTCGTTTACCCCTTAACTCATcg                                                                                                                                    >  2:154977/1‑237 (MQ=255)
                                                                                                                         gATGTCAGCGTGGCATGGCTGGAGG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCCACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCCTGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCCGCCATCGCGATATCTCGTTTCACCCGTACCTCATCTAACGCCTGCCg                                                                                                                         >  2:357827/1‑238 (MQ=255)
                                                                                                                           ggTCAGCGTGGCATGGCTGGAAG‑CGCCGGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGCCGCGGGCACCCCAACGAGAAACCGTT‑CTGATTTCCCAGT‑GGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCa                                                                                                                       <  1:566721/237‑1 (MQ=255)
                                                                                                                           ctcatgctgggaggcgCTGAACG‑CGCCCGAAGTTCCACATATACTGTTAGTGGCAAACTCTGATTTCTCGCGCAGGCAACCCACCAACAAACCGTC‑CGGATTTACAAGT‑GCCCAACCCCCATAGGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCa                                                                                                                       <  2:578703/223‑1 (MQ=255)
                                                                                                                            ttgaGCTTGACAAGGCCGGAAG‑CCCCCCACGGGTCGAAATTACTGTGAACGGCACAATCTGATTTCTGTCGCTGGCAAACCATCGAGAAAACGTT‑TTAATTTAGCAGT‑GGCCAATATCCATATGACCACCACCACCGCAGCCGCCGTAGCCCATGCCCGTTCCGGCTCCCCCTGACATACCCGCTTACGCCACCGCGCTCTATCGTTTCCCCCGAAACTCATCGACCGACtaccgccaa                                                                                                                     >  2:747629/4‑231 (MQ=255)
                                                                                                                            gccaggggggCATGGTGGGAGG‑CCCCCGAGGGTTCGCAATTCCTGTTGTTGCAAAATTTTGATTTCTGCCGCCGGAAACCCAACGAGAAACCGTT‑CTGATTTACCAGT‑GCCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                                                     <  2:908996/231‑1 (MQ=255)
                                                                                                                            gaccgCGGGGAATGGCGGGAAC‑CGCCCAAAGGTTCAAAATTACGTTTAGTGGCAAACTTTTATTTCTGCCCCTGCAAACCCAACGACAAACCGTT‑CTATTTTCCCAGT‑GCCCCATCCCCATAGGCCCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                                                     <  2:36048/235‑1 (MQ=255)
                                                                                                                            gTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGCGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                                                     >  1:768182/1‑239 (MQ=255)
                                                                                                                            gTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                                                     <  1:822393/239‑1 (MQ=255)
                                                                                                                               aGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAAtt                                                                                                                   >  2:444303/1‑238 (MQ=255)
                                                                                                                               aGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAAt                                                                                                                    >  2:14587/1‑237 (MQ=255)
                                                                                                                                 cGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGCGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGCCGCAAATtct                                                                                                                 >  1:54487/1‑238 (MQ=255)
                                                                                                                                 cGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATtct                                                                                                                 >  1:660611/1‑238 (MQ=255)
                                                                                                                                 cGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATtct                                                                                                                 >  2:903083/1‑238 (MQ=255)
                                                                                                                                     gCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTACCTCATCTAACGACTGACGCAAATTCTCCa                                                                                                              >  1:685744/1‑237 (MQ=255)
                                                                                                                                              gAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCCGCCATCGCGATCTCTCGTTTCACCCGTAACTCATCTCACGCCTGCCGCACATTCTCCATCTCTTTAGc                                                                                                    >  2:591309/1‑238 (MQ=255)
                                                                                                                                               gaG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAACTTCTCCATCTCTTTGGCg                                                                                                   >  2:742672/2‑238 (MQ=255)
                                                                                                                                                     cccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACcgcg                                                                                             >  2:1133220/1‑239 (MQ=255)
                                                                                                                                                     cccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGATTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACcgcg                                                                                             >  1:160919/1‑239 (MQ=255)
                                                                                                                                                      ccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGt                                                                                            >  2:948664/1‑239 (MQ=255)
                                                                                                                                                      ccGAAGGTTCGAAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGt                                                                                            <  1:898094/239‑1 (MQ=255)
                                                                                                                                                         aaGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTaa                                                                                         >  1:160886/1‑239 (MQ=255)
                                                                                                                                                             ttCGCAATTCCTGTTAGTGGAAAACTCTGATTTCTGTCGCGGGCAACCCAACGAAAAAACGTT‑CTGATTTCCCAGT‑GGCCCATCCCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAAttt                                                                                      <  1:970053/238‑1 (MQ=255)
                                                                                                                                                               cGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAAtttt                                                                                     >  1:743242/1‑237 (MQ=255)
                                                                                                                                                                gCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCACCCCAACGAGAAACCGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTtgct                                                                                  <  1:188703/239‑1 (MQ=255)
                                                                                                                                                                  aaTTCCTGTTAGTGGCAAACTCTTATTTCTGCCGCTGGCAACCCAACGAGAAACCGTT‑CTGATTTCCCAGT‑GCCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTtgctgc                                                                                <  1:436835/239‑1 (MQ=255)
                                                                                                                                                                      aCTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCCAt                                                                             >  1:600512/1‑238 (MQ=255)
                                                                                                                                                                            aGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCCGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTgg                                                                      >  2:122081/1‑239 (MQ=255)
                                                                                                                                                                               ggCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCCCGATATCTCGTTTCACCCGTCACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGt                                                                    >  2:932104/1‑238 (MQ=255)
                                                                                                                                                                                 cAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTc                                                                  >  2:701516/1‑238 (MQ=255)
                                                                                                                                                                                  accgcggcttccccgccccgtgCAACCCAAC‑CGAAAACCCT‑CTGTATTTCCAGTCGCCCCAGACCCAACTGACCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTcgc                                                                <  2:6703/218‑1 (MQ=255)
                                                                                                                                                                                  aaaCTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTCACGACTGACGCAAATTCTCCCTCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGTGTTcgc                                                                >  1:698829/1‑239 (MQ=255)
                                                                                                                                                                                   acctctGATTTTTGCCGCTGGAACCCCAACGAGAAACCTTC‑CTGATTTCCCAGT‑GGCCCATACCAATACGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTcgcg                                                               <  1:1057363/237‑1 (MQ=255)
                                                                                                                                                                                     cccggATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTCCCAGT‑GGCCCATCCCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGc                                                             <  1:1191713/235‑1 (MQ=255)
                                                                                                                                                                                       ctGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTa                                                           <  1:300790/239‑1 (MQ=255)
                                                                                                                                                                                       ctGATTTCTGCCGTGGGCACCCCAACGAGAAACCGTT‑CTGATTTCCCAGT‑GGCCCCTGCCCATGTGACCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTa                                                           <  1:357827/239‑1 (MQ=255)
                                                                                                                                                                                               tGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTACTTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAggg                                                     >  2:1090053/1‑237 (MQ=255)
                                                                                                                                                                                               ggTCGCTGCCACCCCAACGAGAAACCGTT‑CTAATTTCCCAGT‑GCCCCATCCCCATATCACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCa                                                   <  2:660611/238‑1 (MQ=255)
                                                                                                                                                                                                gTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAt                                                  >  1:26304/1‑239 (MQ=255)
                                                                                                                                                                                                gTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGCTTCGCGGCTAACAGGGCAt                                                  >  1:101410/1‑239 (MQ=255)
                                                                                                                                                                                                 gccccggccaagccaaagaaaaaCGTTGCTGATTCACCGGG‑CCCCCATACCCCAATGCCCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAGCTCATCTAACGACTGACGCAAATGCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAt                                                  <  2:385946/220‑1 (MQ=255)
                                                                                                                                                                                                  cgatGGCAACCCAACGAGAAAACGTA‑CTGATTTACCAGT‑GCCCCATACCAATAGGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAtt                                                 <  1:934808/235‑1 (MQ=255)
                                                                                                                                                                                                   gCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGt                                               <  1:399183/239‑1 (MQ=255)
                                                                                                                                                                                                   gCTGCCACCCCAGCGAGAAACGGTG‑CGCATTACCCAGC‑GGCCAATACCGAGATGCCCGCCACCACCCCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGt                                               <  2:379822/239‑1 (MQ=255)
                                                                                                                                                                                                    cTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTa                                              >  1:953898/1‑239 (MQ=255)
                                                                                                                                                                                                       gCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAAGGCATTGTAtt                                            <  1:903083/238‑1 (MQ=255)
                                                                                                                                                                                                           cccAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATa                                        >  1:628115/1‑238 (MQ=255)
                                                                                                                                                                                                                     tgtctaaaagaaccagccAGT‑GCCCCACCCCCACAGGGCGGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGt                               <  2:498878/222‑1 (MQ=255)
                                                                                                                                                                                                                      agcGTT‑CTAATTTACCAGT‑GGCCTATACGCATATGACCGCCACCACCGCATCCCTCGTATCCCATGCCCATTACATCTCCGCCCGGACTACCCCCATCAGGCATCGCGAAAACTCGTTTCACCCGTAACTCATCTAACGAACGACCCAATTTCTCCATCTCCTTGCCCACCGCGTGAATTATGCTGCGATCCGGTCGGTTAACGGCTACGCGGGGATAGTATTCATAACGATTCCTCa                             >  2:680639/3‑238 (MQ=255)
                                                                                                                                                                                                                      aaccgttcgaagtgaCCAGT‑GGCCCACCCCAAGAGGCCCCCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCCCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCa                             <  2:624265/225‑1 (MQ=255)
                                                                                                                                                                                                                       aCGTT‑TTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCAcc                           <  1:749655/239‑1 (MQ=255)
                                                                                                                                                                                                                         gTT‑CTGATTTCCCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAg                         <  1:1067249/239‑1 (MQ=255)
                                                                                                                                                                                                                          tt‑CTGATTCACCAGC‑GACCCAGCCCCCTATGCCCGCCACCACCGCCGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGt                        <  2:441026/239‑1 (MQ=255)
                                                                                                                                                                                                                             cTGATTTACCAGT‑GGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCGTTGTATTCATAACGCTTCGTCACCAGTTg                      <  1:980933/239‑1 (MQ=255)
                                                                                                                                                                                                                                 tttACCAGG‑GGCCCATACCCATATGACCGCCACCACCGCCGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTg                   <  1:154977/238‑1 (MQ=255)
                                                                                                                                                                                                                                           ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCACGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTCTTCATAACGATTCGTCACCAGTTGCTGTTCCAGTgc          >  2:362262/1‑238 (MQ=255)
                                                                                                                                                                                                                                           gccccgtacccataTGACCGCCACTACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTgcg         <  1:362262/237‑1 (MQ=255)
                                                                                                                                                                                                                                                 tacccataTGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGc                     >  1:498878/1‑221 (MQ=255)
                                                                                                                                                                                                                                                  acccataTGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCttt  <  1:1133220/239‑1 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                              
CAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAG‑CGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTT‑CTGATTTACCAGT‑GGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCTTT  >  NC_000913/4201039‑4201515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A