Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F9 I0 R1 105 139.1 2894862 97.5% 2822490 224.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 825,233 C→A 12.9% M292I (ATG→ATT)  ybhR ← putative ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913825,2330CA12.9% 288.1 / 4.7 124M292I (ATG→ATT) ybhRputative ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base C (66/39);  new base A (4/14);  total (71/53)
Fisher's exact test for biased strand distribution p-value = 1.72e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 127 total aligned reads displayed.

AGAAGTTACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGCCAGGT  >  NC_000913/824997‑825466
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                         
agaggTTACAACCCCTTAGAGCTAACAATCGCGAACGCCGTTGACCCTGTCGTGGCCGGTATCACCAGTAACGGTGACAAACTATTCCACACAATAGACAGACGCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAAGCCACGTCAGGTTTGGCAGCCA‑TACCGGCATGTTTTTCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGcatcat                                                                                                                                                                                                                                         <  2:1255775/239‑1 (MQ=255)
      tACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCCTaaaagc                                                                                                                                                                                                                                   >  1:1186374/1‑236 (MQ=255)
       aCATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACa                                                                                                                                                                                                                                  >  1:1294415/1‑239 (MQ=255)
                tACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCg                                                                                                                                                                                                                         >  1:967468/1‑239 (MQ=255)
                tACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCg                                                                                                                                                                                                                         >  1:40458/1‑239 (MQ=255)
                  cGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCCCCATAAAGACAAACACCCCGAt                                                                                                                                                                                                                       >  1:1329500/1‑239 (MQ=255)
                  cGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACTCCggt                                                                                                                                                                                                                       >  1:1204192/1‑237 (MQ=255)
                      aaaaCATCGCGTACGCCGCTGCCCCTGTCGGGGCCGTTATCCCCAGTAGCGGCCACAAACTATCCCACACAATACCCAGACTCGCATCCTTAAAATAAATCTGCTTGGTAATGTCCGAAAAGG‑GGGAAATAGGTTTAATCCCCGTAAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGAAAGGGAGATTGGCGGGCATCATAAAGACAAACACGCCGATAAAc                                                                                                                                                                                                                   <  1:848356/238‑1 (MQ=255)
                       aaaCATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATa                                                                                                                                                                                                                                        >  1:101722/1‑217 (MQ=255)
                       aaaCATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATa                                                                                                                                                                                                                                        <  2:101722/217‑1 (MQ=255)
                             cgcgTACGCCGCTGACCCTGTCGTGGCCGTTCTCCCCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATATGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGATAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCAGCGGAGAAACGTAACCGGAAAGGAGAAGGGCTGGGATAATAAAAAACAACACGCAGATAAACGCct                                                                                                                                                                                                               >  2:492150/1‑236 (MQ=255)
                             cgcgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCct                                                                                                                                                                                                               >  1:152975/1‑236 (MQ=255)
                             cgcgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCCGATAAAAGCct                                                                                                                                                                                                               >  1:534318/1‑236 (MQ=255)
                             cgcgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCAAAAAGACAAAAACGCCGAGAAACGCctgat                                                                                                                                                                                                            >  2:202831/1‑237 (MQ=255)
                              gcgTCCCCCGCTGCCCCTGTCGTGGCCGTTATCCCCAGTAGCGGCCACAAACTATCCCACACAATATCCAGACTCGCATCCTTCAAAAAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAACCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCctgctg                                                                                                                                                                                                           <  1:537208/239‑1 (MQ=255)
                              gcgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGATAAACGTAACCGGAAAAGAGAATGGCGGGCATCATAAAGACAAACACCCCCATAAACGccc                                                                                                                                                                                                               >  1:59718/1‑234 (MQ=255)
                              gcgTACGCCGCAGCCCCTGTCTTGGCCGTAATCCCCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGAACCATTCAAAAAAATCTGCTTGTGAATGTCCGTAAAGT‑GGGGAATGGGGTTAATCCACGGCAGGTTTTGCAGCCA‑CCCGGGCATGTTTTCCACCGGAAAAACGTAACGGAAAAGGAGAATGGGGGGCATCATAAAGAAAAACACGCCGATAAACGCctgctg                                                                                                                                                                                                           <  2:1150155/239‑1 (MQ=255)
                               cgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGCTCATAAAGACAAACACGCCGATAAAAGCctgctgg                                                                                                                                                                                                          >  2:66668/1‑238 (MQ=255)
                               cgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCCGCTaaa                                                                                                                                                                                                                    >  1:1278749/1‑229 (MQ=255)
                               cgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCCGAGAAACGCCTGCtgt                                                                                                                                                                                                          >  2:1092241/1‑239 (MQ=255)
                                        cTGCCCCTGTCGGGGCCGTTACCACCAGTGGCGCCCAAAAACTATTCCACAAAATATCCAGACCCGCATCCTTAAAAAAAATCTTCTTGGTAAGGTCCGTAAAGT‑GGCGAATAGGGTTAACCCACGTCAGGTTTGGCAGCCA‑TACCGGCATGTTTTCCACGGGAGAAACGTAACCGGAAAGGAGAATGGCGGGAATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGaa                                                                                                                                                                                                 <  1:166066/239‑1 (MQ=255)
                                        cTGCCCCTGCGGTGGCCGTTATCACAAGTAGCGGCCACAAACTATCCCACAAAATACCCAGACCCGCATCCTTAAAAAAAATCTGCTTGTTAAGGCCCGAAAAGT‑GGCGAATAGGTTTAACCCCCGTCAGGTTTTGCAGCCA‑TACCGCCATGTTTTCCACCGGAGAAACGTACCCGAAAAGGAGAATGGCGGGCATCATAAAGACAACCACGCCGATAAACGCCTGCTGTTGTGTTGaa                                                                                                                                                                                                 <  1:30067/239‑1 (MQ=255)
                                        cTGCCCCTGCCGTGGCCTTTATCCCCAATAGCGGCCAAAAACTATACCACAAAATTCCCGAACTCGCATCCTTAAAAAAAATCGGTTTGGTAATGCCCGAAAAGG‑GGCAAAGAGGTTTAACCCACGTCAGGTTTGGCAGCCA‑TACCGGCATGTTTTCCACCGGAAAAACGTAACCGGAAAGGAGAATGGCGGGCATCAAAAAGACAACCACGCCGATAAACGCCTGCTGTTGTGTTGaa                                                                                                                                                                                                 <  2:883950/239‑1 (MQ=255)
                                                gTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGATCATAAAGACAAACACGCCGATAAAAGCCCGCCGGTGTGTTGAAAagaaggg                                                                                                                                                                                         >  2:139733/1‑235 (MQ=255)
                                                gTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGA‑GGCGAATAGGGTTAATCCACGTCAGGTTTTTCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCCATAAACGCCTGCTGTTGTGTTGGACAGAGtga                                                                                                                                                                                         >  1:154135/1‑239 (MQ=255)
                                                  cGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGTTAATGTCCGAAAGGT‑GGCGAATAGGGTTAATCCACGTCAGTTTTTGCAGCCA‑TACCGGCATGTTTCCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGtgat                                                                                                                                                                                        <  1:1060754/238‑1 (MQ=255)
                                                    tGGCCTTTACCACCAATACAGGCAAAAAACTATCTCACACAATACCCAGACTCTCATCCTTAAAATAAATCGGTTTTTTATTGTCCTAAAGGT‑GGCGAATGGGTGTAATCCCCGTCAGGTTTTGCAGACA‑TACCGGCATGTTTTCCCCCGGAGAACCGTAACCGAAAAGGAGAATGGCGGGCATCATAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGaa                                                                                                                                                                                     <  2:974452/239‑1 (MQ=255)
                                                      gCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGAAAAGT‑GGCGAATAGGGCTAATCCACGTCAGGGTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCAGAAAGACAAAAACGCAGACAAACGACTGCGGGTGTGTTGAAAAGAGGGATGGAAt                                                                                                                                                                                   >  2:583557/1‑239 (MQ=255)
                                                              cACCTGTAGCGCCCAAAAACTATTCCACACAATACCCAGACTCGCATCCTTCAAAAAAATCTGCTTGGTAATGTCCGTAAAGG‑GGCGAATGGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATTTTTTCCACCGGAAAAACGTAACGGAAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGAc                                                                                                                                                                           <  1:1101697/239‑1 (MQ=255)
                                                                    tAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCCTAAAGACAAAAAAGCCGATAAACGCCTGCTGTTGGGTTGAACAGAGGGATGAAATCAACAGACCGAAt                                                                                                                                                                      >  1:408154/1‑238 (MQ=255)
                                                                       cGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGTAATCAACAGACCGAATccc                                                                                                                                                                   >  1:710251/1‑238 (MQ=255)
                                                                         gCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGATCATAAAGACAAACACGCCGATAAACGCCCGCTGTTGTGTTTGACAGCGTGATGAAAATAACATACCGAATcccca                                                                                                                                                                 >  1:629634/1‑236 (MQ=255)
                                                                           cacaAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCCTAAAGACAAACAAGCCCACAAACGACCGCTGGTGTGTTGAACAGAGTGATGGAAACAACAGAACGAATAcccccc                                                                                                                                                               >  2:929324/1‑237 (MQ=255)
                                                                              aaaCTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACCCCGATAAACGCCTGCCGGTGTGTTGAACAGAGTGGAGAAAACAACAAACCGAATCCCACCAGCGa                                                                                                                                                           >  2:1305109/1‑239 (MQ=255)
                                                                                attATTCCACAAAATGCCAATACGCGCACTCATTAAATAAACCTGGTTGTTAAGGACAGAAAAGG‑GGCAAGAGGGGTTAATCCGCTGCATGTTTGGAAGCCA‑TACCGTCATGTTTCCCACCGAAGAAACGTAACGGAAAAGGAAAAGGGCGGGAATAAAAAAGACAACCACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATa                                                                                                                                                         <  2:1204192/237‑1 (MQ=255)
                                                                                    ttCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCCTCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAAAGTGATGAAATCAACAGACCGAATCCCCCCAGCGATaaaac                                                                                                                                                     >  1:271607/1‑237 (MQ=255)
                                                                                            aaTATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTTCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAATGAGAATGGCGGGCATCATAAAGACAAACACCCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCa                                                                                                                                             >  1:1340354/1‑239 (MQ=255)
                                                                                            aaTATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGATAATAAAGACAAAAACGACCATAAACGCATGCTGTTGTGGTGAACAGAAGGGTGAAATTAACAAAACCAATCCCACCAGACCTAAACCACaaaac                                                                                                                                              >  2:13866/1‑236 (MQ=255)
                                                                                            aaTATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATTATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGGTGAACAGAGTGATGAAATCAAACAACCGAATCCCACCAGCGATAAAACATaaaac                                                                                                                                              >  1:911626/1‑236 (MQ=255)
                                                                                            aaTATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACa                                                                                                                                                                                               >  1:1281579/1‑189 (MQ=255)
                                                                                             agatCCAGACTCTACACCTAAAAAGAATTCGGGTTGGTAATGCCCGTAAAGT‑GACAAATGGGGTTAACCCCCTACAGGTTTAGAAGCAA‑TCCCGGCATGTTTACCACAGGAGAAACGTAACGGGAAAGGAGAATGGGGGGAACCATAAAAAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCAc                                                                                                                                            <  2:617483/237‑1 (MQ=255)
                                                                                                tCCAGACTCGCATCCTTAAAAAAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAACCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAAAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGaa                                                                                                                                                                                                 <  1:1244920/183‑1 (MQ=255)
                                                                                                 ccAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCAACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATAATAAAAATAAACAAGCCGATAAACGCCTGCTGTTGTGTTGAAAAGAGAGATGAAAACAACCGACCGAATCCCACCAACGATAAACACAAAATAACCacc                                                                                                                                        >  2:476468/1‑237 (MQ=255)
                                                                                                  cagtctcccagcttaaaaaaaaatCTGCTTGGAAATGTCTGTAATGT‑GGCAAAGGGGGTTAACCCCCGTCAGTTTTTGCAGCCA‑TACCGGAATTTTTTCCACCGGAGAAACGTAACGGGAAAGGAGAATGGCGGGCAACAAAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCg                                                                                                                                       <  2:470682/223‑1 (MQ=255)
                                                                                                  caatcggacaacattaaaataaaaCGGCTTGGTAATGCCCGAAAGGT‑GGCGAATGGGGTTAATCCACTTAAGGTTTTGCAGACA‑TCCGGGAATGTTTTCAACCGGAAAAACGTAACCGGAAAGTGGATTGGCGGGAAACAAAAAAACAACCACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCg                                                                                                                                       <  2:152975/223‑1 (MQ=255)
                                                                                                    aactctaacccTTAAAAAAAATGTGCGTGGT‑AGGTCCGGAAAATGGGCGAAAAGGGTTAACCAAGGACGGGGTGTGCGGCCG‑TCCGGACTTTTTTTCCACGGGAAAAATGTAACCGAAAAGGAGAAGGGGGGGAATAAAAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTa                                                                                                                                     <  2:568242/230‑1 (MQ=255)
                                                                                                      cTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGGGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAAACCAAAATCACCATCGaaaa                                                                                                                                   >  2:850738/1‑239 (MQ=255)
                                                                                                        cGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCGCCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAAAAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGt                                                                                                                                 >  1:879870/1‑239 (MQ=255)
                                                                                                          cATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAg                                                                                                                                  >  1:617483/1‑236 (MQ=255)
                                                                                                          cATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCCGATTAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAAAAGACCGAATCCCACCCGCGATAAACCATaaaatacccacggaaaggag                                                                                                                               >  2:753801/1‑222 (MQ=255)
                                                                                                            tcttgaaaataaatCTGCTTGGTAATGTCCTTAAAGT‑GGCAAATAGGGTAAGTCCACTTAAGGTTTTGCAGCCA‑TCCCGGCATTTTTTCCACCGGAGAACCGTAACCGGAAAGGAGAATGGCGGGCATCAAAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGaa                                                                                                                             <  1:225390/233‑1 (MQ=255)
                                                                                                                             tttGGTAAGGCCCGTAAAGT‑GGCGAATAGGGTTAATCCCCGTCAGGTTTTGCAGCCA‑TCCCGGCATGTTTCCCACCGGAAAAACGTAACCGGAAAGGAGAATGGCGGGCAACAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCTCCAGCGATAAACCATAAATCACCATCGTa                                                                                                                                     <  1:575759/213‑1 (MQ=255)
                                                                                                                             cTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATTAAGACAAACACGCCGATAAACGCCTGCTGTTGGGTTGGACAGAGTGATGAAACCAACCGACCGAATCCCACCAGCGATCAACCATAAATAACCATCTTAAAAGAGAAccagcccagccacccg                                                                                                             >  2:1406080/1‑223 (MQ=255)
                                                                                                                               ggattaTGCCCGAAAAGT‑GGGAAAGAGGGTTAATCCACGCATGGTTTTGCAGCGA‑TGCCGGGTTATTTTCCACCGGAGAAACGTACCCGGAAAGGAAAAGGGCGGTCATAAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCg                                                                                                          <  2:800598/234‑1 (MQ=255)
                                                                                                                                   atttcccGAAAAGT‑GGCAAATGGGTTAAACCCACGACAGGTTTTGCAGCCA‑TACGGGCATGTTTCCCCCCGGAGAAACGAAACCGGAAAGGAGAATGGGGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAg                                                                                                       <  1:753801/233‑1 (MQ=255)
                                                                                                                                   aaTGTCCGTAAAGG‑GGCGAATAGGTTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAAAAACGAAACCGAAAAGGAGAATGGCGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAg                                                                                                       <  1:1424478/238‑1 (MQ=255)
                                                                                                                                       tCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGGGATGAAATCAACAGACCGAAACCCACCAGCGATAAAACAAAAATCACCATCGTAAAATAGAACAGCGCCAGCGATCCGGCGAGgggggt                                                                                                  >  1:905800/1‑237 (MQ=255)
                                                                                                                                        ccGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGGTGTGTTTAACAGAGGGATGAAATCAACAGACCGAATCCCACCAGCGCAAAAACAAAAATCACCATCGTAAAGGAGAACAGCCCCAGCGATCCGGCGAAGGGGCtt                                                                                                 >  1:839975/1‑239 (MQ=255)
                                                                                                                                           tAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGcatca                                                                                                                                                                                                                                          >  1:930533/1‑99 (MQ=255)
                                                                                                                                           tAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGcatca                                                                                                                                                                                                                                          <  2:930533/99‑1 (MQ=255)
                                                                                                                                           tAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAAt                                                                                                                                               >  1:1314177/1‑190 (MQ=255)
                                                                                                                                            aaggT‑GGCGAATGGGGTTAATCCACGTAAGTTTTGGCGGCCA‑TACGGGCATTTTTCCAACCGGAGAAACGTAACCGAAAAGGAGAATGGGGGGAATAAAAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGa                                                                                              <  2:632512/235‑1 (MQ=255)
                                                                                                                                            aaaGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGAt                                                                                             >  1:632512/1‑239 (MQ=255)
                                                                                                                                            aaaGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGGTGAAAAGAGGGATGAAATCAACAGACCGAATCCCACCAGCGATAAAACATAAATCCCCACCCTAAAGTAGAAAAGCCCCCGCGATCCGGCGCAGGGGATTTGAt                                                                                             >  2:332928/1‑239 (MQ=255)
                                                                                                                                             aaGT‑GGGGAAAAGGGTTAATCCCCGTCAGGGTTGGCAGCGA‑TCCGGGCGTGTTTCCCACCGAAAAAACGAAACCGGAAAGGAGAATGGCGGGCATAAAAAAGACAACCACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATa                                                                                            <  1:510981/239‑1 (MQ=255)
                                                                                                                                             aaGT‑GGAGAATGGGGTTAATCCCCGTGGGTTTTTGCGGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCAACATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATa                                                                                            <  2:1186374/239‑1 (MQ=255)
                                                                                                                                             aaGG‑GGCGAATAGGGTAAACCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATa                                                                                            <  1:66668/239‑1 (MQ=255)
                                                                                                                                              aggtgggaataaGGGTTAACCCAGGGCAGGTATAGCAACAG‑TCCGGGCATGTTTGCCACCGGAGAAACGTAACCGGAAGGGAGATTGGCGGCCATCATAAGGCAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATa                                                                                            <  2:540009/228‑1 (MQ=255)
                                                                                                                                                t‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCCGCTGTTGTGTTTAAAAGAGTGATGAAATCAAAAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGCCGAACAGCGCCAACGAACCGGCGAAGGGGAATTGAtcag                                                                                          >  1:702203/1‑235 (MQ=255)
                                                                                                                                                           ggTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCCCCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACCCCCAGATACCa                                                                               >  1:1127422/1‑239 (MQ=255)
                                                                                                                                                           ggTAAATCCACGTAAGTTTTGGCAGCCA‑TACCGGCATGTTTTCCCCCGGAAAAACGTAACCGAAAAGGAGAATGGCGGGCATAATAAAAAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGaa                                                                                                        <  2:310174/214‑1 (MQ=255)
                                                                                                                                                            gTTAGTCCCCGTCAGGTTTGGC‑GCCACAACCGGTATGTTTTCCACCGAAAAAACGTAGCCGAAAAGGAGAATGGCGGGAATCATAAAGACAACCACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCa                                                                               <  1:9812/238‑1 (MQ=255)
                                                                                                                                                                acccccGTCAGGGTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGAAACCGGAAAGGAGAATGGCGGGCATCAAAAAGACAACCACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGc                                                                          <  2:1294415/234‑1 (MQ=255)
                                                                                                                                                                acccAAGTCAGTTTTTGCAGCCA‑TACCGGCATTTTTTCCCCCGGAAAAACGTAACCGAAAAGGAGAATGGCGGGAAGAATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGc                                                                          <  1:476468/237‑1 (MQ=255)
                                                                                                                                                                aTCCAGGTCAGGTTTGGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACGGGAAAGGAGAAGGGCGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGc                                                                          <  1:1374962/239‑1 (MQ=255)
                                                                                                                                                                aTCCACGTCATTTTTTGCCGCCA‑CACCGGCTTTTTTCCCACCGGAAAAACGTAACGGGAAAGGAGAGTGGCGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGc                                                                          <  1:549018/239‑1 (MQ=255)
                                                                                                                                                                aTCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCg                                                                           >  1:412229/1‑238 (MQ=255)
                                                                                                                                                                     cGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTACCCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGca                                                                     <  1:1098372/239‑1 (MQ=255)
                                                                                                                                                                     cGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGa                                                                                              >  1:310174/1‑214 (MQ=255)
                                                                                                                                                                     cGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGca                                                                     >  1:1136421/1‑239 (MQ=255)
                                                                                                                                                                     cGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGc                                                                      >  1:105860/1‑238 (MQ=255)
                                                                                                                                                                     cGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGAAAAACGCCTGCTGTTGTGGTATACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATAGAAAAGTAGAACAGCGCCAGCGATCCGGCGAGGGGGATTTGATACGCCCAGCTACCAAACGCAAgg                                                                      >  2:132116/1‑237 (MQ=255)
                                                                                                                                                                           gTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtgg                                                               >  1:96433/1‑239 (MQ=255)
                                                                                                                                                                           gTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtgg                                                               >  2:482622/1‑239 (MQ=255)
                                                                                                                                                                           gTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGGAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGAGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtgg                                                               >  1:706149/1‑239 (MQ=255)
                                                                                                                                                                            ttttTCACCCA‑TACGGGTATTTTTTCCACCGGAAAACCGTAACGGGAAATGATAATGGGGGGAATCAAAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtg                                                                <  2:1340354/237‑1 (MQ=255)
                                                                                                                                                                            ataagaaaaagaaccgggaatttttcCCACGGAAAAAACGAAACGGGAAAGGAGAATGGGGGGCATAAAAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtgg                                                               <  2:1202438/217‑1 (MQ=255)
                                                                                                                                                                             tttGCAGCCA‑TCCCTGAATGTTTCCCACCGAAGAAACGTAACCGAAAGGGAGAATGGCGGGCATAATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtggt                                                              <  1:652399/238‑1 (MQ=255)
                                                                                                                                                                                     cA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGaa                                                     >  1:213692/1‑239 (MQ=255)
                                                                                                                                                                                     cA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCCGCTAAACGCCTGCTGTTGTGTTGGACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAAACATAAAACACCATCGTAAAAAAGAACAGCGCCAGCGATCCGGCGCAGGGGATTTGATACGCCCAGAAACCAATCGCCACCACAATGGGGGGCTGGaa                                                     >  2:826974/1‑239 (MQ=255)
                                                                                                                                                                                             gCATGTTTTCCACCGGAGAAACTTAACCGAAAGGGAGAAGGGCGGTCATCAAAAAGACAAACACGCCGATAAACGCctgctg                                                                                                                                                                                                           <  1:213965/82‑1 (MQ=255)
                                                                                                                                                                                              aaagTTTGCCACCGGAGAAAAGTAACCGGAAAGAAGAATGGCGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCg                                              <  2:271607/235‑1 (MQ=255)
                                                                                                                                                                                                  ttttCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGaa                                                     >  1:1202438/1‑227 (MQ=255)
                                                                                                                                                                                                      ccACCGGAGAAAAGTAACCGGAAAGGAGAAGGGCGGGCATAATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAAc                                     <  1:781209/239‑1 (MQ=255)
                                                                                                                                                                                                       cACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGaa                                                                                                                                                                                                 >  2:213965/1‑82 (MQ=255)
                                                                                                                                                                                                            gagaAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGt                               >  2:409277/1‑239 (MQ=255)
                                                                                                                                                                                                              gaAACGTAACCGGAAAGGAAAATGGCGGGCATAAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTa                              <  1:332928/238‑1 (MQ=255)
                                                                                                                                                                                                                       ccGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCCCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGGGGCCTGGAAGGGGGCGACAATTAACGCCGGGACGGCTTTGcc                    >  2:205256/1‑239 (MQ=255)
                                                                                                                                                                                                                                  aaTGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGc                                                                          >  1:1046184/1‑174 (MQ=255)
                                                                                                                                                                                                                                         ggCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAAACGCCAGCACAATGGTGGACTGGAAGGGGGCGACAATTAACGCCGGGACGGATTTGCCGATGAAGAACCGCCAggt  >  2:1307693/1‑239 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                         
AGAAGTTACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGT‑GGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCA‑TACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGCCAGGT  >  NC_000913/824997‑825466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A