Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F18 I0 R1 274 115.5 2655328 86.7% 2302169 226.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 83,780 C→A 11.5% intergenic (‑72/‑588) leuL ← / → leuO leu operon leader peptide/global transcription factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091383,7800CA11.5% 284.3 / 2.7 124intergenic (‑72/‑588)leuL/leuOleu operon leader peptide/global transcription factor
Reads supporting (aligned to +/- strand):  ref base C (53/51);  new base A (2/15);  total (55/69)
Fisher's exact test for biased strand distribution p-value = 3.05e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 125 total aligned reads displayed.

TGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTATTGAATTATATGTTTTGCGATTTTTTTTGATA  >  NC_000913/83542‑84017
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                             
tGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGc                                                                                                                                                                                                                                               <  2:836979/239‑1 (MQ=255)
            agCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGACTGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGCCGCAATAAAAACGt                                                                                                                                                                                                                                    >  2:623744/1‑238 (MQ=255)
                ccTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATCCAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCg                                                                                                                                                                                                                                >  2:754989/1‑238 (MQ=255)
                ccTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCg                                                                                                                                                                                                                                >  2:635063/1‑238 (MQ=255)
                ccTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGAAACAAAAA‑CGGATGTCAACCCGGACGAAATAAAAACGTCCCGc                                                                                                                                                                                                                               >  1:1103256/1‑239 (MQ=255)
                ccTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGGGAGTCATTAAATCAGCTCCAGATGAATGCGATAGCATTTTAAAGTTACTGGATACAAAAA‑CGGATGTCAACCCTAACCACATAAAAAccctgg                                                                                                                                                                                                                                 >  1:154296/1‑232 (MQ=255)
                               aaaaaacCCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCCGGATGCCGCTCACTCGTCGACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGc                                                                                                                                                                                                                <  2:1181030/239‑1 (MQ=255)
                                     aCCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGt                                                                                                                                                                                                          <  2:1103256/239‑1 (MQ=255)
                                      cccgggcgtggggcggggTTTTTTGTTTGGGTGTGTGCTGGGTTAATGGTTGATGCCGCCCCCTCGGCTACCGAGCAAAGAAGAGTCTTTTAGTAGGAGTAGACCGAAAAAGCGAACGATGGGAGGCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTa                                                                                                                                                                                                         <  1:754989/224‑1 (MQ=255)
                                         gcgcAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTaaaa                                                                                                                                                                                                      >  2:203623/1‑239 (MQ=255)
                                         gcgcAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGGGAGTTCTGAACCCGTaaaa                                                                                                                                                                                                      >  2:24405/1‑239 (MQ=255)
                                                  gcggggTTTTTTGTTTGGCTGGGTGCTGGCTTAATGGGGGATGCCGCTCCCTGGTCTCCCGGGAAAAGAAGATTCGTTTAGTAGTAGTAGACCGAAAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTaa                                                                                                                                                                                              <  1:1188785/235‑1 (MQ=255)
                                                  ctcgGGGTTTTTGGTGGACGGCGTGCTGGCTTAATGGGGGATTCCGCCCACCCGTCTGCCGCGTAAAGAAGTTGGGTTTAAAAGTAGTAGACCGATAAAGCAAACGATGTGAGTATTTAAACCAGCTCAAGATAAAGGCGATGTGCTTTTAGAGTTACGGGACAAAAAAA‑CGGATGCCACCCCTGACGAAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTaa                                                                                                                                                                                              <  1:902800/236‑1 (MQ=255)
                                                  cgcgGGTTTTTTGTTTGACTGCGGGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGAAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTaa                                                                                                                                                                                              <  2:740585/238‑1 (MQ=255)
                                                    agggTTTTTTGTTTGAATGCGTGCTGGCTTAATGCTGGATGCAGCTCACTCGTCTACCGCGCAACTAGGATGCGTTTAGTAGGAGAAGACCGTTAAAGCGAACGATGTGAGTCATTAAATCAGATCCAGATAAATGCGCTATGCTTTTAGAAGTACTGGATACACAAC‑CGGAGCTCAACCCTGACGCACTAAAAACATCCCCCCAGCGCAAGTTCTGCACCCATaaaaacaaaaaaagg                                                                                                                                                                                           >  1:693916/2‑228 (MQ=255)
                                                       gTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGATCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGGGAGTTCTGCATCCGTAAAATTAGCTAATtgtg                                                                                                                                                                                         >  2:754565/1‑238 (MQ=255)
                                                          ttttttttGACTGCGTGCGGGCTTAATGCTGGATGCCGCTCCCTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGtgctgc                                                                                                                                                                                     <  2:785854/239‑1 (MQ=255)
                                                          ttttGTTTGACTGCGGGCTGGCTTAAGGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGtgctgc                                                                                                                                                                                     <  2:500617/239‑1 (MQ=255)
                                                           tttgtttgACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACCCGTCTACCGGGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCg                                                                                                                                                                                    <  2:145360/239‑1 (MQ=255)
                                                           tttgtttgACGGGTGGGTGGTTTAATTTGGGATGCCGCTCACCGGATTACCGCGAAAAGAAGTTGCGTTTGATAGTAGGAGAACGATAAAGCGAACGATGTGAGTCATTAAATCAGCCCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCg                                                                                                                                                                                    <  1:1079848/239‑1 (MQ=255)
                                                                 tgACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGCATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑AGGATGTCAACCCTGACGCAATAAAAACTTCCCGCCCGGGGGAGTTCTGCATCCGAAAAATTAGCTAATTGTGGCGCGGGGGtt                                                                                                                                                                              >  1:879821/1‑239 (MQ=255)
                                                                      gcggtcTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGt                                                                                                                                                                         <  2:35050/234‑1 (MQ=255)
                                                                       cGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTa                                                                                                                                                                        >  2:905745/1‑239 (MQ=255)
                                                                         tGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGCACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGGCAACCCTGACGCAATAAAAACATCCCGCCAGCGGGAGTTCTGCACCCCCAAAATAAGACAATTGACCGGCGGGGGTaaacaaaag                                                                                                                                                                      >  1:1250803/1‑233 (MQ=255)
                                                                         tGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGCTACAAAAA‑CGGATGTCAACCCTGACGCGATAAAAACGTCCCGCCAGCGTGAGTTCTGCACCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAg                                                                                                                                                                      >  2:1049636/1‑239 (MQ=255)
                                                                         tGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGAAAAGAAGATGCTTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAg                                                                                                                                                                      <  2:103426/239‑1 (MQ=255)
                                                                          tcTGGCTTTATTGTGGATGCCGCTACCTTGTTTTCCGGGGAAAGAAGGTGCGTTTAGTAGTAGTAGACCGATAAAGCAAACGAGGGGAGTCATTAAATCAGCTCAAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGAAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAg                                                                                                                                                                      <  1:24405/237‑1 (MQ=255)
                                                                           gtGGCTTTTTGCTGGATGCCGCTCACTGGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGGGAGTTAATAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATAAAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCg                                                                                                                                                                    <  1:923933/238‑1 (MQ=255)
                                                                           cTGGTTTAATTCTGGATGCCGCTCACCTGTCTACCGCGCAAAGAAGATGTGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTGAGAGTTCCTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCg                                                                                                                                                                    <  2:693916/239‑1 (MQ=255)
                                                                                   aTGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCAAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCCTGAGTTCTGCATCCCTAAAATTAGCTAATTGTGCTCCGGTGGTTAAGGTaaagcatcttaat                                                                                                                                                            >  1:69675/1‑228 (MQ=255)
                                                                                       tGGATCCCGATCACTCTTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCTATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATTGCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTc                                                                                                                                                         <  2:1028938/238‑1 (MQ=255)
                                                                                        ggATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGCTGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGAGATTAAttcttg                                                                                                                                                       >  2:1063827/1‑235 (MQ=255)
                                                                                        ggATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAAtt                                                                                                                                                           >  2:934840/1‑235 (MQ=255)
                                                                                        ggATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAAtt                                                                                                                                                           >  2:314171/1‑235 (MQ=255)
                                                                                                cTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGGTCTGCATCCGTAAAATTACCTAATTGTGCTGAGGGGGTTAAAGAAAGCGATATTAATTTTTGCTTaaaa                                                                                                                                                >  1:387803/1‑236 (MQ=255)
                                                                                                   acgtgTCTACCGCGCAAAGAAGAGGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGGGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCg                                                                                                                                            <  2:879821/235‑1 (MQ=255)
                                                                                                    ctcggcacccGGGCAAAGAAAGTGGGTTTAGTAGTAGTAAGCCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCGGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGa                                                                                                                                           <  2:1216163/231‑1 (MQ=255)
                                                                                                        tCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCt                                                                                                                                       >  2:817228/1‑239 (MQ=255)
                                                                                                               cgcAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAACTTAGCTAATTGTGCTGCGGTGGTTAAAGAAAGGGATATTAATTTTTGTTTAACAACCAACGCTTTTCa                                                                                                                                  >  1:324389/1‑237 (MQ=255)
                                                                                                               cgcAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGCCGCTTTTCATc                                                                                                                                >  2:605539/1‑239 (MQ=255)
                                                                                                               cgcAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATc                                                                                                                                >  2:1150554/1‑239 (MQ=255)
                                                                                                                ataaaggcccggctttttttattagtagACTGAAAAAGTGACCGATGTAGATCATTAATTCAGCTCAAGATGAATGCGATATGCTTTTAAAGTTACTGCATTCAAAAA‑CGGATGTCTACCCTGACGCAATAAAAAAGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATc                                                                                                                                <  2:1032182/216‑1 (MQ=255)
                                                                                                                 cAAAGAAGATGCGTTTAGTAGTAGTAGACCGCTAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTACGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGGGGTTAAAGTAACCGCTATTAATTTCTCTTTAACAACCGCCGCTTTCTATCgg                                                                                                                              >  1:583862/1‑239 (MQ=255)
                                                                                                                 cAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCgg                                                                                                                              >  2:498141/1‑239 (MQ=255)
                                                                                                                  aaaaaaGATGAGTTTAGTATAAGTATACCAATAAAGAGAACAATGTGAGTCATTAAAGCAGCTCCAGAGGAAGGCGATATGCTTTTAGAGTTAATGGATACAAAAA‑CGGATGACAACCCTGACGAAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGt                                                                                                                             <  1:905745/239‑1 (MQ=255)
                                                                                                                  aaaGAGAATGCGTTTGGTAGTAGTAGCCCAGTAAAGCGAACGATTGCAGACATAAAATCAGCACCTGATGAAGGCGATATGTGTTTAGAGTTACTGGATACAAACA‑CGGGTGTCACCCCTGACGAAATAAAAACGTCCAGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCAGCGGt                                                                                                                             <  1:1051593/239‑1 (MQ=255)
                                                                                                                    agaaggTGGGTTTAGTAGTAGGAAGCCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTg                                                                                                                           <  2:1142904/239‑1 (MQ=255)
                                                                                                                            ctttttgtatgtgttaaCCGATAAAGGCAACGATGTTGTTCATTAAACCAGCCCCAGAGTAATGCGATGTGCTTTTAGAGTTTCTGGATAAAAAAA‑CGGATGTCAACCCTGACGAAATAAAAACGGCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATAttt                                                                                                                   <  1:1063827/223‑1 (MQ=255)
                                                                                                                              tttAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCa                                                                                                                 >  2:338623/1‑239 (MQ=255)
                                                                                                                                      tagtagACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGCATGAGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAAGGTACCGCAAACGTAAGTTCTGCATCCGTAAAATTAGCTAATTTTGCCACGGTGGGTAAAGCAAGCGTTATTACTTTCTGCTTAACTAACGACGGTTTTACTCGGTTGACatatccgtcttctaac                                                                                                         >  1:1032182/1‑227 (MQ=255)
                                                                                                                                         ttaaccgtaaaaGCGAACGGTGTGGTTCAATAAACCATCCCCAAATGAATGCGATTGGCTTTTAGACTTACGGGATAAAAAAA‑CGGATGTCAACCCGAACGCAATAAAACCGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAAttt                                                                                                       <  1:934840/229‑1 (MQ=255)
                                                                                                                                          agACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCCCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAAtttt                                                                                                      <  2:1250803/238‑1 (MQ=255)
                                                                                                                                              cGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCggtggt                                                                                                                                                                               >  2:81177/1‑161 (MQ=255)
                                                                                                                                              cGATAAAGCGAACCATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCggtggt                                                                                                                                                                               <  1:81177/161‑1 (MQ=255)
                                                                                                                                                aTAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGGTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGCGGTTAAAGTAAGCGCTCTTACTTTCTGATTAACTACCGCCGCTTTTAATCGTTTGCAAAATTTTAGCAAAAAtttttaccaca                                                                                               >  1:183265/1‑233 (MQ=255)
                                                                                                                                                      tttatatgtgacaacaatAAGTCCGCCCCGGATGAATGAGATGAGTTTTTAGGATTACTGGAAAGGAAAA‑CGAAGGTCAACCCTGACACAATAAAAACGTCCCGCCAGCGTGAGTTCTGTCTCCGTAAAATTAGCTAATTGTGCTGCGGTTGTTAAAGTAAGCGATATTAATTTCTTCATAACTACTGACGCTTTTCATCGGTTGACATATTTCAGCATAAATGTTTGCATCTAATCaa                                                                                         <  1:137925/222‑1 (MQ=255)
                                                                                                                                                        aaCGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCg                                                                                                                                                                    <  2:514300/162‑1 (MQ=255)
                                                                                                                                                        aaCGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAAttt                                                                                                                                                          >  2:1292026/1‑172 (MQ=255)
                                                                                                                                                        aaCGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGAATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCg                                                                                                                                                                    >  1:514300/1‑162 (MQ=255)
                                                                                                                                                             tgtgtttctttAAATCAGCTCCAGTTGAATGCGATATGCTTTTAGAGTTACTGGCAACAAAAA‑CGTATGACACCCCTGACGTAAAAAAAACGTCCCGCCAAGGTTAGTTCTTCATCCGTAAAATTAGCTAATTGTGCTGCGGTTGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTCTTGCATCTAATCAACGAGGaa                                                                                  <  1:635063/230‑1 (MQ=255)
                                                                                                                                                                  gTCATTAAAGCAGCCCCAGATGAATGCCATATGCTTTAAGATTTACTGGATACAAAAG‑CGGATGTCAACCCTGACGCAATAAAAACTTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAg                                                                              <  2:1142657/238‑1 (MQ=255)
                                                                                                                                                                   ttaTTTAATCACCTCCAGTTTAATGCGATTGGTTTTTAAGGTTACTGGA‑ACAAAAACCGGATTCCACCCCTGACGCAATAAAACCGTCCCGCCAGGGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAggg                                                                            <  1:156447/237‑1 (MQ=255)
                                                                                                                                                                     aTTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGa                                                                          >  2:163854/1‑239 (MQ=255)
                                                                                                                                                                      ttAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGAc                                                                         >  2:156447/1‑239 (MQ=255)
                                                                                                                                                                       tAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGTGTTCTGCATCCGTAAAATTAGCTAATTGTTCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGCCGCCTTTCATCGGTTGCAAAATTTATGCTTAAATTTTTGCATACAAACAACGAGGAAAAAgggtaaa                                                                        >  1:599420/1‑235 (MQ=255)
                                                                                                                                                                       tAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAACCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGAAAAATTTTAGCATAAATTTTTGCATCTAATCAAAGGGGAAAAAGGGGaaa                                                                        >  1:1148490/1‑237 (MQ=255)
                                                                                                                                                                       tAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAAAGTCCCGCCAGCGTGAGTTCTGCATCCTTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGCAACCGATATTAATTTCTCCTTAACTACTGCCGCTTTTCATCGGTTGACTATTTTAAGCATAAATTTTTGTATCTAATCAAACGGAAAAAAGTGGACa                                                                        >  1:581016/1‑239 (MQ=255)
                                                                                                                                                                       tAAATCAGCCCCAGATGAATTCGATATGCTTTTAGAGTGTGTGGATAAAAAAA‑CGGATTTCAACCCTGACGAAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAACCAACGAGGAAAAAGGGGACa                                                                        <  2:1295369/239‑1 (MQ=255)
                                                                                                                                                                               cTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGaaaaa                                                                               >  2:137925/1‑224 (MQ=255)
                                                                                                                                                                               cTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTAAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCAc                                                                >  2:383223/1‑239 (MQ=255)
                                                                                                                                                                               cTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGGGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCAc                                                                >  2:127159/1‑239 (MQ=255)
                                                                                                                                                                                tcaaGATGAATGCATTTTGCTTTTGGGGTTACTGGAAACAAAAC‑CGGATGACAACCCTGACGCAATAAAACCGTCCCGCAAGCGGGAGTTCTGCAGCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCAcg                                                               <  1:163854/236‑1 (MQ=255)
                                                                                                                                                                                tCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCAcg                                                               <  2:583862/239‑1 (MQ=255)
                                                                                                                                                                                 ccAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGGGGAAAAAGGGGACAAAATGCAc                                                                >  2:407700/1‑237 (MQ=255)
                                                                                                                                                                                  aaGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGAAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCAcgcg                                                             <  2:1253446/238‑1 (MQ=255)
                                                                                                                                                                                      tGAATGTGATATGCTTTTAGAGTTACTTGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGc                                                         <  2:614694/239‑1 (MQ=255)
                                                                                                                                                                                        aaggggttttttttttAAAGTTGTGGGATAAAAAAA‑CGGATGACAGCCCTAGCGAAATAAAAACGTCCCGCCAGGGTGATTTATGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGc                                                         <  1:498141/225‑1 (MQ=255)
                                                                                                                                                                                           ggaaattGCTTTTGAAGTTACGGGATACAAAAC‑CGGATTTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAAc                                                    <  2:545069/233‑1 (MQ=255)
                                                                                                                                                                                           gCGATTTGCTTTTAGAGTTACGGGATACAAAAA‑CGGATGGCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAAc                                                    <  2:364589/239‑1 (MQ=255)
                                                                                                                                                                                           gCGATATGCTTTTAGAGTTACTGGATCAAAAAC‑CGGATGTCAACCCTGGCGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAAc                                                    <  2:69675/239‑1 (MQ=255)
                                                                                                                                                                                             tatatGCTTTTAGAGTTACTGGATCCAAAAC‑CGGATGTCAACCCTGACGCAATAAAACCGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAAc                                                    <  2:705795/236‑1 (MQ=255)
                                                                                                                                                                                                atGCTTTTAGAGTTACTGTACTAAAAAA‑CGGATGCCACCACTGACGCCATAAAAGCGGCCCGCCAGTGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGTCGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATc                                               <  2:105646/239‑1 (MQ=255)
                                                                                                                                                                                                   gttttaagttgcttGGATAAAAAAC‑CGGATGTCAACCCTGACGCAATAAAACGGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCtg                                            <  1:383223/226‑1 (MQ=255)
                                                                                                                                                                                                    ttttAGAGTTACTGGATATAAAAA‑CGGAAGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGAGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCtg                                            <  2:562362/238‑1 (MQ=255)
                                                                                                                                                                                                       tAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCAATccctgtcc                                        >  2:645875/1‑233 (MQ=255)
                                                                                                                                                                                                        taggTTACTGGAAAAAAAAA‑CGGATTTCAACCCTGACGCAAAAAAAACGCCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGTTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTgatgat                                       <  1:1269684/236‑1 (MQ=255)
                                                                                                                                                                                                        aggtttccgggaacaaaaaa‑GGGTTGCAAACCCTGACACAAAAAAACCGGCCCGCCAGCGTGAGTTCTGGATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTgatgat                                       <  1:6264/224‑1 (MQ=255)
                                                                                                                                                                                                        agggTTACTGGAAAAAAAAC‑CGGATGGCAACCCTGACGCAATAAAAACGTCCCGCCAGGGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTgatgat                                       <  2:599420/236‑1 (MQ=255)
                                                                                                                                                                                                        agagTTACGGGATTCAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTgatgat                                       <  2:1086334/239‑1 (MQ=255)
                                                                                                                                                                                                        agagTTACGGGATAAAAAAC‑CGGATGTCAACCCTGACGAAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTgatgat                                       <  2:581016/239‑1 (MQ=255)
                                                                                                                                                                                                             ttcTGGATAAAAAAA‑CTGAGGTCAACCCTGACGAAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCAGTAAAATTAGCTAATTGGGCTGCGGTTGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTa                                  <  1:1120681/237‑1 (MQ=255)
                                                                                                                                                                                                             tACTGGATCAAAAAA‑CGGTTTTCACCCCTGCCGAAATAAAAACGTCCCGCCAGCGTTAATTCTACATCCGTAAAATTAGGTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGATTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTa                                  <  1:1150554/239‑1 (MQ=255)
                                                                                                                                                                                                             tACGGGATTCAAAAT‑CGGATTTTAACCCTGAAGAAATAAAAACGCCCCTTCAGCCTGAATTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTa                                  <  2:1316181/239‑1 (MQ=255)
                                                                                                                                                                                                              aCTGGTTAAAAAAA‑TGGTTTTCAACCCTGACGAAAAAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTAt                                 <  1:407700/239‑1 (MQ=255)
                                                                                                                                                                                                               ggggATACAAAAA‑CGGATGTCAACCCGGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATATAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTAtt                                <  2:183265/237‑1 (MQ=255)
                                                                                                                                                                                                               cgggtaaaaaaaa‑CGGTTTTCAACCCGAAAGCAAAAAAAACTGCCCGCCAGGGTGAGTTCTGGATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTAtt                                <  1:338623/231‑1 (MQ=255)
                                                                                                                                                                                                               cTGGATACAAAAC‑CGGATGCCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTAtt                                <  2:1148490/239‑1 (MQ=255)
                                                                                                                                                                                                                    tACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCgg                                                                                                                              >  2:901346/1‑140 (MQ=255)
                                                                                                                                                                                                                    tACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGCCAAAATGAACGAGTTGCAAAACCTATCCTGATGATTTGAATTTAAta                           >  1:1226837/1‑238 (MQ=255)
                                                                                                                                                                                                                                              gCAATAAAAACTTCCCCCCAGCGTGAGTTCTGCATTCGTAAAATTGTGTAATTGTGCTGCGGTGGTTAAAGTAAGCCATATTAATTTCTGCTTAACTTCCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTATTGAATTATATGTTTTGCGATTTTTTTTGata  <  1:817228/239‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                             
TGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGATATGCTTTTAGAGTTACTGGATACAAAAA‑CGGATGTCAACCCTGACGCAATAAAAACGTCCCGCCAGCGTGAGTTCTGCATCCGTAAAATTAGCTAATTGTGCTGCGGTGGTTAAAGTAAGCGATATTAATTTCTGCTTAACTACCGACGCTTTTCATCGGTTGACATATTTCAGCATAAATTTTTGCATCTAATCAACGAGGAAAAAGGGGACAAAATGCACGCGTTGCAAAACCTATCCTGATGATTTGTATTGAATTATATGTTTTGCGATTTTTTTTGATA  >  NC_000913/83542‑84017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A