Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F18 I0 R1 274 115.5 2655328 86.7% 2302169 226.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 846,304 T→G 11.6% T54P (ACC→CCC)  glnQ ← glutamine transporter subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913846,3040TG11.6% 349.6 / 7.1 140T54P (ACC→CCC) glnQglutamine transporter subunit
Reads supporting (aligned to +/- strand):  ref base T (34/76);  new base G (25/2);  total (62/78)
Fisher's exact test for biased strand distribution p-value = 3.25e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 140 total aligned reads displayed.

TGATGTGCACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGCACCAGGGTAATAATCAGATAGAACACCGCCA  >  NC_000913/846069‑846539
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
tggtttggtctttttGCCCGCCCGGCTTTCGCCCGCAGTTTACGTGGCAGTTTTTCCGCCTCTTCTT‑TGGTCGCGGCACGCACGGGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTGTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGAt                                                                                                                                                                                                                                          <  1:1196285/225‑1 (MQ=255)
 gaggtgCACGTTCTGCCCGACCGGCTTTCGCCAGCAGCTCTCGTGCCAGTTTTTCCGCCTCTTCTT‑TGGTCGCGCCACGCACGCGTAGCGGGCCAAACATGGCGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGAt                                                                                                                                                                                                                                          <  2:142384/235‑1 (MQ=255)
     tgCACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GTTGCGGGAAGAGGCAACACTGCTGGAACACCATACCTGCTTCCTGGCGAAGCAGGCGCACGTCAACTTTCGGACGCTTAAACTTCAGGCCATCCACAATACGACCGCCGGGGGGAATttct                                                                                                                                                                                                                                      >  1:254426/1‑238 (MQ=255)
     tgCACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCCTCGACATCCAACTCCCCGGGGGGGATttct                                                                                                                                                                                                                                      >  2:1232376/1‑238 (MQ=255)
      gcccggtCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATttcttc                                                                                                                                                                                                                                    <  2:916174/233‑1 (MQ=255)
      gcccGTTCTGCCAGGCCGACTTTCGCCAGCAACTCACGTGCCAGTTTTGCCGGCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATttcttc                                                                                                                                                                                                                                    <  2:1184136/236‑1 (MQ=255)
      gCACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGGGATttctt                                                                                                                                                                                                                                     >  2:47888/1‑238 (MQ=255)
      gCACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCCCGTCAACTTTCGGTTCGTTAACCTTCGGGCCCTCCACAATCAGATCCCCGAGGGGGAAttcttc                                                                                                                                                                                                                                    >  1:1249306/1‑239 (MQ=255)
      gCACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCAGCTTCCTGGCGAATCAGGCGCTCGTCACCTTTCGGATCGTTAACCTTCAGGCCATCGCCCATCAGATCGCCGGGGGGGATttctt                                                                                                                                                                                                                                     >  2:97342/1‑238 (MQ=255)
       cACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGCCAATCAGATCCCCGGAGGGGATTTCTTcc                                                                                                                                                                                                                                   >  2:808519/1‑239 (MQ=255)
       cACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCTGGAGGGGATTTCTTcc                                                                                                                                                                                                                                   >  2:526146/1‑239 (MQ=255)
       cACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGAAAAAACAAACGCCGGAGGGGATTTCTTcc                                                                                                                                                                                                                                   >  1:631764/1‑239 (MQ=255)
       cACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGAACGTTAACCTTCAGGCCATCGCCAATCCGATCGCCGGGGGTGATTTCTTcc                                                                                                                                                                                                                                   >  2:1208089/1‑239 (MQ=255)
            tCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCCTCGACAATCAGATCGCCGGAGGGGATTTCTTCCAGttt                                                                                                                                                                                                                              >  2:749236/1‑239 (MQ=255)
              tGCCCGACGGGCTGTCGCGCGCAGCTCACGTGCCATTTTTTCCGCCGCTGCTT‑TGGTCGCGCCACGCACGCGTAGCGGGCCAAACATGGCGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATTCCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTttgt                                                                                                                                                                                                                            <  1:885392/239‑1 (MQ=255)
                   gACCGACTTTCGCCAGCAGCTCAGGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATg                                                                                                                                                                                                                       <  2:552893/239‑1 (MQ=255)
                   gACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCACCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATg                                                                                                                                                                                                                       <  2:166154/239‑1 (MQ=255)
                   cgccttgtttcctccgcagccaccGTGCCAGTTTTTCCGCCCATTCTTGTGTCCG‑GCCCAGAGTGCGTAGCGGGGCACACAGGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTTCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTCGTTGATg                                                                                                                                                                                                                       <  1:904143/216‑1 (MQ=255)
                    aCCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATGCACAACCAGATCGCCGCGGGGATTTTTTTCCAGTTTTTTGaaga                                                                                                                                                                                                                      >  1:791578/1‑236 (MQ=255)
                    aCCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGAGATTTCTTCCAGTTTGTTGATgc                                                                                                                                                                                                                      >  2:1254451/1‑239 (MQ=255)
                        aCTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGCCAATCCGACCGCCGGGAGGGATTTTTTCCAGTTTGTTGATgcagc                                                                                                                                                                                                                   >  1:757846/1‑238 (MQ=255)
                        aCTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGCCAATCAGATCGCCGGAGGGGGTTTCTTCCAGTTTTTTGATgcacc                                                                                                                                                                                                                   >  2:826421/1‑236 (MQ=255)
                        aCTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATgcagcg                                                                                                                                                                                                                  >  2:309282/1‑239 (MQ=255)
                           ttCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATgcagcgcag                                                                                                                                                                                                               <  2:631764/239‑1 (MQ=255)
                                    agcctaCGTGCCAGTTTTGCCGCCTCTTCCT‑TGTTCGCGCCACGCACCGGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACCCCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGt                                                                                                                                                                                                         <  2:1097099/231‑1 (MQ=255)
                                     gcgcACGTGCCGGTTTTTCCGCCTCTTCTT‑TGGTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGa                                                                                                                                                                                                      <  2:271919/235‑1 (MQ=255)
                                         ccttGCCAGTTTTTCCGTCTTTTTTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACAGGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTac                                                                                                                                                                                                 <  1:263424/236‑1 (MQ=255)
                                         aCGTGGCAGTTTTGCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTac                                                                                                                                                                                                 <  2:695003/239‑1 (MQ=255)
                                         aCGTCCCAGTTTTTCCGCCTCTTCGT‑TGGTCGCGCCACGCCCGGGTTGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGGTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTac                                                                                                                                                                                                 <  2:1088677/239‑1 (MQ=255)
                                              ccAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGCCAATCAGATCGCCGGAGGGGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGCCGATTTaccgga                                                                                                                                                                                             >  2:1125913/1‑238 (MQ=255)
                                                   ttttCCGCCCCTTTTG‑TGCTCTCGCCCCGCACGCGTAGCGGGAGCAAAATGACGTTTTCCAGCGCTAGCA‑GATGCGGGAAGAGGTCAAACGGGTGGAACCCCATCCCGTCTTCCCGGCCAATTAGGCCCTCGCCAGCTGTCGGATCGTTAACCTTCAGGCCAACGCAAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGTAGGGTCGATTTaccggaaccgga                                                                                                                                                                                       <  1:734619/239‑1 (MQ=255)
                                                   tttgCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTaccggaaccgga                                                                                                                                                                                       <  2:1147954/239‑1 (MQ=255)
                                                             cttctt‑TGTTCGCGCCACGCACGGGTAGCGGGCCAAACATGACGTTTGCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGGCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATa                                                                                                                                                                             <  2:935244/239‑1 (MQ=255)
                                                             cttctt‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATa                                                                                                                                                                             <  2:701046/239‑1 (MQ=255)
                                                               tctt‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCGGATCGCCGGAGGAGATTTCTTCCAGTTTGTTGATGCAGCCCAGCAGGGTCGATTTACCGGAACAGGCCGGCCCGAAAAt                                                                                                                                                                           >  1:1156749/1‑239 (MQ=255)
                                                                ctt‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGGGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCg                                                                                                                                                                                <  2:329682/233‑1 (MQ=255)
                                                                    tttccgtgcCGCGCACG‑GTGGCGGGCCAAACAAGGCGTTTTCCCGCGCTGGCA‑GATGCGGGAACGGGTAAAACGTCTGGAACGCCATTCCTGCTTCCTGGCGAATCAGACGATCTTCAACTTTCGGATCGGTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGTGTCGATTTACCGGAACCGGACGGCTCGATAAAcccca                                                                                                                                                                      <  1:375956/232‑1 (MQ=255)
                                                                      ttCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCCGATCGCCGGAGGGGTTTTCTTCCAGTTTGTTGATGCACCGCACCAGGGGCGATTTACCGGAACCGGGCGGCCCGATAAAcacccc                                                                                                                                                                     >  1:701046/1‑237 (MQ=255)
                                                                        cgcgCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATCCCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCCGATCGCCGGCGGTGATTTCTTCCAGTTTGTTGTTGCACCGCAGCCGGGACGATTTACCGGAACCGGACGGCCCGACAATcccccca                                                                                                                                                                    >  1:1021160/1‑235 (MQ=255)
                                                                              ccgcacggGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACCCCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGc                                                                                                                                                             <  2:1323184/238‑1 (MQ=255)
                                                                                ccccgcgTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATcacca                                                                                                                                                                      <  2:828735/225‑1 (MQ=255)
                                                                                      gTAGCGGGCCAAACTTGTCGTTTTCCAGCGCTGTCA‑GGTGCGGGAAGAGGTAAAACTGCTGGAACCCCATACTTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCTTCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCa                                                                                                                                                     <  1:452337/239‑1 (MQ=255)
                                                                                      gTAGCGGGCCAAACATTACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCa                                                                                                                                                     <  2:144155/239‑1 (MQ=255)
                                                                                       tAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGCCAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCCCCACGACTTCGCCCTGGGCaa                                                                                                                                                    >  2:682227/1‑239 (MQ=255)
                                                                                          cGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGGGATTTATTCCCGTTTGTTGATGCATCGCAGCACGGTCGCTTTACCGGAACCCGACGGCCCGCAATACACCACGACTTCGcccctccctctta                                                                                                                                                 >  1:828735/1‑229 (MQ=255)
                                                                                           gggTCAAACATGCCGTTTTCCAGCGCTGGAC‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGTTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGtt                                                                                                                                                <  1:309282/239‑1 (MQ=255)
                                                                                            ggCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGtt                                                                                                                                                <  2:757846/238‑1 (MQ=255)
                                                                                            ggCCAAAATTGCCGTTTTCCCGGGGTTTCAGGATG‑GGGAAGAGGGAAAACTGCTGGAACACCATTCCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGtt                                                                                                                                                <  1:1013198/238‑1 (MQ=255)
                                                                                              ctaaaCATGCCGTTTTACCGCGCTGTCA‑GACGCGGGAAGAGGTAAAACGGCTGGAACACCATCCCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTGCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCa                                                                                                                                              <  2:119710/236‑1 (MQ=255)
                                                                                                aaaCTTGAGTTTTTCCGGCCCTGGCA‑GATGGCGGAAGAGGCTAACCTGCTGGAAGCCCATGCCTGCTTCCTGGCCAAGCAGGCGCGCGTCAACTAGCGGATTGTGACCCTTCATGCCATCGCCAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAAt                                                                                                                                           <  1:702685/239‑1 (MQ=255)
                                                                                                aaaCCTGACGTTTTCCGGCGCTCGCC‑GATGCGGGAAGAGGTAAAACTGGTGGAACACCATACCTGCTGTCTGGGGAATCAGGCGCTCGTCACGTTTCGGATCGTTAACCTTCAGGCCATCGACAAGCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAAt                                                                                                                                           <  1:95985/239‑1 (MQ=255)
                                                                                                aaaCATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAAt                                                                                                                                           <  2:769731/239‑1 (MQ=255)
                                                                                                  accttactttttTCAGGGTTGTCG‑GAGGCGGGAAGAGGTAAATCTGTTGATACACCATACCTGCTTCCTGGCTAACCAGGCGCTCGTCAATTTTCGGATCGTGAACCTTCAGGCCATCGACAATCAGATCGACGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCCCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCg                                                                                                                                         <  1:1208089/231‑1 (MQ=255)
                                                                                                  aCATGACGTTTTCCATCGCGTTCA‑GAAGCGGGAAGAGGTAAAACTGCTGGAACCCCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCg                                                                                                                                         <  2:113077/239‑1 (MQ=255)
                                                                                                  aCATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGCTAATCACCACGACTTCGCCCTggg                                                                                                                                                       >  2:539805/1‑225 (MQ=255)
                                                                                                     tGACGTTTTCCGGCGTTTTCA‑GATGGGGGAAGGGGTAAACGTGTTGGAACCCCATACCGGTTTCCTGGGGAATCAGTCGCTCGTCAACTTTCGGATCGTTACCCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGata                                                                                                                                      <  1:47888/239‑1 (MQ=255)
                                                                                                       aCGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGGGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAACTCGATAtt                                                                                                                                    >  2:95985/1‑239 (MQ=255)
                                                                                                           tttCCAGTGCTGGCA‑GATGCGGGAAGAGGGAAAACTGCTGGAACCCCCTCCCTGCTTCCCGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTgc                                                                                                                                <  2:595228/239‑1 (MQ=255)
                                                                                                           tttCCAGGGCTGTCA‑GATTCGGGAAGAGGTAAAACTGCTGGAACCCCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTgc                                                                                                                                <  2:339449/239‑1 (MQ=255)
                                                                                                           tttCCAGCTCTGTCA‑GATGGGGGAAGAGGTAAAACTGCTGGAACACCATGCCTGCTTCCTGGAGAATCAGGCGCTAGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTgc                                                                                                                                <  2:431346/239‑1 (MQ=255)
                                                                                                            ttCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACCCCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTgca                                                                                                                               <  2:791578/239‑1 (MQ=255)
                                                                                                                     tgtgA‑GATGCGGGAAGAGGTAAAACTGCTGGAACCCCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTggg                                                                                                                      <  2:73261/239‑1 (MQ=255)
                                                                                                                      ttgacggtgggggAAGGGGTAAACCTGCTGAAACCCCATGCCTGCTACCTGGCGAATCTGGCGATCGGCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGGCTATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTggg                                                                                                                      <  1:484618/229‑1 (MQ=255)
                                                                                                                       tCA‑GATGCGGGAAGAGGTAAAACTGCTGGCACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATa                                                                                                                                                                             >  2:232453/1‑182 (MQ=255)
                                                                                                                       tCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATATTCACCACCAATTCGCCCTGGGCAATGTTCAAATGGATATTGTGCAGCACCgggggt                                                                                                                    >  1:814458/1‑237 (MQ=255)
                                                                                                                                      agGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGAGATTTCTTCCAGTTTGTTGATGCAGCCCAGCAGGGTCGATTTACCGGACCCGGACGGCCCGATAATAACCACGCCTTCGCCCTGGGCAATGTTCCAACCGATATTGTCCCGAACCTTGGTTGGGCCaaaaggctg                                                                                                      >  1:1146004/1‑233 (MQ=255)
                                                                                                                                           aacctgttgGTACCCCATACTTCGTTCCTGGCCAATCAGGGGCTCGTCAACTTTCGGATCTTTAACCCTCAGGCCAGCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGgaga                                                                                                 <  1:583330/236‑1 (MQ=255)
                                                                                                                                            aaCTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCATGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGCCGTCCCGATAATCACCACGACTTCGCCCGTGGCAAGGTTCAAATCGACATTGTACACCACCCGGGTTGGGCCAAAGTGCTTGGCGAc                                                                                                >  1:509891/1‑239 (MQ=255)
                                                                                                                                                gctgGAACACCATACCTGCTTCCTGGTGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGGCGttt                                                                                            >  2:80145/1‑239 (MQ=255)
                                                                                                                                                  tgGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGttttt                                                                                          >  2:1036241/1‑239 (MQ=255)
                                                                                                                                                  tgGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGAAGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGAGAtt                                                                                                                                    >  2:398502/1‑197 (MQ=255)
                                                                                                                                                           atgccTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAAt                                                                                 <  2:1034875/236‑1 (MQ=255)
                                                                                                                                                           aTACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGATGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTTTTCAGCACCTGGGTGGGGGCAAAGGACTTGGAACAGTTTTTAaaataaat                                                                                 >  1:14852/1‑239 (MQ=255)
                                                                                                                                                               cTGCTTCCGGGGAAATCAGGCGGTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGATGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATcaca                                                                             <  2:14852/239‑1 (MQ=255)
                                                                                                                                                                  cTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGAACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGGCGTTTTTAAATTCAATCACAGGa                                                                          >  2:917599/1‑239 (MQ=255)
                                                                                                                                                                   ttCCGGGGGAATCGGCCGCTCTTCACTTTTCGGATGTTTAACCGTCAGGCCATCGACAATGAGATCGCCGGAGGTGATTGCTTCCAGGTTTGTGATGCAGCGCGGCAGGGGCGATTTGCCGGAGCCTGACGGCCCGATAATCCCCACGGCTTCGGCCTGGGCAATGTTCAAATCGATAGTGTGCAGCCCCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATGCAATCACAGGAt                                                                         <  1:897944/239‑1 (MQ=255)
                                                                                                                                                                    tCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGGTATTGGGCACAACATGGGTTGGGCCAAAGTGCTTGGGGACGTTTTTAAATTCATTCACAGGAtt                                                                        >  2:612227/1‑239 (MQ=255)
                                                                                                                                                                    tCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGCTATTGTGCAGCACCTGGGTTGGGCCAAAGGGCTTGGAGACGTTTTTAAATTCAATCACAGGAtt                                                                        >  2:395848/1‑239 (MQ=255)
                                                                                                                                                                    tCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGGGATTTCTTCCCATTTGTTGATGCACCGCAGCAGGGTCGATTTAACTGCACCGGACGGCCCGCTAATCACCACGCCTTCGCCCTGGGCCAAGTTCAAATCGGTGTTTGCCACCACCGGGGTTGGGCCACAGGGCTTGGGGACGTTTTTACATTCAAACACAGGAta                                                                        >  1:1130702/1‑238 (MQ=255)
                                                                                                                                                                        gtgtaaTCGGGGGCTCGTGTAGTTTTGGATTGTTTACCTTCAGGCCATCGACAAACAGATCGCCGGATGTGATTTCTTCCAGTTTGTGGATGCAGCGCAGGAGGGTCGATTTACCGGAACCGGACGGCCCGTTAATCGCCCCGGCTTCGCTCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCa                                                                    <  1:210274/235‑1 (MQ=255)
                                                                                                                                                                        ggCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGCGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTc                                                                     >  2:1307268/1‑238 (MQ=255)
                                                                                                                                                                             acgcggcctcggTCAACTTTCGGATCGTTACCCTTCAGGCCATTGACAATCAGGTCGCCGGAGTTGATTTCCTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCct                                                                <  1:271217/227‑1 (MQ=255)
                                                                                                                                                                             aTCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCctt                                                               >  2:1251905/1‑239 (MQ=255)
                                                                                                                                                                                      tCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAga                                                      <  2:1146004/239‑1 (MQ=255)
                                                                                                                                                                                       cGTAAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAga                                                      <  2:1021160/238‑1 (MQ=255)
                                                                                                                                                                                           aaCTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCCCCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGacgacg                                                 <  2:735675/239‑1 (MQ=255)
                                                                                                                                                                                                  ggATCTTTAACCTTCAGGCCGTCGCACATCAGATGGCCGGGGGTGATTTCGTCCAGTTTGTGGATGCAGCGCATCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGGCTGCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATa                                          <  1:805102/239‑1 (MQ=255)
                                                                                                                                                                                                     tCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCCCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTTGGTTGGGCCAAAGGCCTTGGAAACGTTTTTAAATTCAATACCAGGTTTTTTATCTTTCTTTCCCGCCAACTCAAAAAAAAg                                       >  1:1065843/1‑239 (MQ=255)
                                                                                                                                                                                                       gTTAACCTTCAGGCCCTCGACAATCAGGTCGCCGGAGGTGATTTCTTCCAGTTTGGTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGGCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCt                                     <  2:1130702/239‑1 (MQ=255)
                                                                                                                                                                                                          aaCCGTCAGGCCTTCGACAATCAGAACGGCGTAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGTTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCGTCTTTCCAGACGACGCAGAATAAAGCTCAg                                  <  2:1214846/239‑1 (MQ=255)
                                                                                                                                                                                                             cctccggCCATCGAAAAGCAGAGCCCCGGAGGTAATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGCAc                               <  1:1017013/234‑1 (MQ=255)
                                                                                                                                                                                                                cAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCTGATAATAACCACGACTTCGCCCTGGGCAATGTTCAACTCGCTATTGTGCAGCACCTGGGTTGGGCCAAACTGCTTGGAGACGTTTTTAAATCCAATCACAGGATTTTCATCCTTCTTTCCAGCCGACCCAGAATaaacacaaaccacag                            >  1:797484/1‑227 (MQ=255)
                                                                                                                                                                                                                cAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCACAATAAAGCTCAGCACCAg                            >  2:261214/1‑239 (MQ=255)
                                                                                                                                                                                                                    ccttgggaaaTCAGATCGCCCGAGGTTATTTTTCCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGCACCAGGGt                         <  1:1137446/230‑1 (MQ=255)
                                                                                                                                                                                                                    ccATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGCACCAGGGt                         <  2:405573/238‑1 (MQ=255)
                                                                                                                                                                                                                      aTCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGTTTTTCATcc                                                                 >  1:75608/1‑196 (MQ=255)
                                                                                                                                                                                                                       tCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGGACCAGGGtaata                     >  2:1001298/1‑239 (MQ=255)
                                                                                                                                                                                                                        cgaacaTCAGATCGCTGGGGGTGATTTTTCCCAGTTTGTGGATCCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCCCCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGCACCAGGGtaataa                    <  1:1114821/234‑1 (MQ=255)
                                                                                                                                                                                                                          aCAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGCACCAGGGTAATAATc                  <  2:1249306/239‑1 (MQ=255)
                                                                                                                                                                                                                                           ggTAATTTCTTCCTATTTGTTGAGGGAGGGCAGAGGGGTCGATTTACCGGAACGGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGCACCAGGGTAATAATCAGATAGAACACCGCCa  <  2:527974/238‑1 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
TGATGTGCACGTTCTGCCAGACCGACTTTCGCCAGCAGCTCACGTGCCAGTTTTTCCGCCTCTTCTT‑TGTTCGCGCCACGCACGCGTAGCGGGCCAAACATGACGTTTTCCAGCGCTGTCA‑GATGCGGGAAGAGGTAAAACTGCTGGAACACCATACCTGCTTCCTGGCGAATCAGGCGCTCGTCAACTTTCGGATCGTTAACCTTCAGGCCATCGACAATCAGATCGCCGGAGGTGATTTCTTCCAGTTTGTTGATGCAGCGCAGCAGGGTCGATTTACCGGAACCGGACGGCCCGATAATCACCACGACTTCGCCCTGGGCAATGTTCAAATCGATATTGTGCAGCACCTGGGTTGGGCCAAAGTGCTTGGAGACGTTTTTAAATTCAATCACAGGATTTTCATCCTTCTTTCCAGACGACGCAGAATAAAGCTCAGCACCAGGGTAATAATCAGATAGAACACCGCCA  >  NC_000913/846069‑846539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A