Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,120,560 |
A→C |
10.8% |
V332G (GTG→GGG) |
wcaJ ← |
colanic biosynthesis UDP‑glucose lipid carrier transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,120,560 | 0 | A | C | 10.8%
| 202.1
/ 2.0
| 90 | V332G (GTG→GGG) | wcaJ | colanic biosynthesis UDP‑glucose lipid carrier transferase |
| Reads supporting (aligned to +/- strand): ref base A (54/24); new base C (4/8); total (58/32) |
| Fisher's exact test for biased strand distribution p-value = 2.31e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 |
GGTAATGCCCGGTTTCACCTTATGGCGCAGCATGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAGGCGGTTAA‑CCCCGGAAAGCGGCGTGTCGTAAAGCGGCACCACCGGTACGCCGTTC > NC_000913/2120328‑2120796
|
ggTAATGCCCGGTTTCACCTTATGGCGCAGCATGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACCGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCa < 2:689359/239‑1 (MQ=255)
gCCCGGTTTCCCCTTAGGGCGCAGCATGGAGCCTTCAATGAGCTGTCGATACTGTTCGTTAGGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATggaac < 2:5266/239‑1 (MQ=255)
tttCACCTTATGGCGCAGCATGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACt > 2:223633/1‑239 (MQ=255)
cTTATGGCGCAGGATGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCa < 2:772202/221‑1 (MQ=255)
tATGGCGCAGCATGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTTTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACt > 2:1074068/1‑239 (MQ=255)
tGGCGCAGCATGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGGGGTACG‑GCGCAGAAAGTTCCCCCC‑TTT‑GGGG‑ACGCGCGG‑ATC‑GTTCTGCGCCGCCTGGGGCACCCCCTTGTCGTTCTCCATCACTTTTATGACACGGAAATCCcaacattt > 1:498167/1‑233 (MQ=255)
tGGCGCAGCATGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATACCTTTCATGGAACGGAACTTCCACACttt > 2:1221454/1‑239 (MQ=255)
cagcaTGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCg > 2:483506/1‑239 (MQ=255)
agcaTGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCCGAAAGTTCCCCAC‑TTT‑GGAG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTTTGGTTCTCCTCCCCTTTCAGggaacggaccctgcccctttaacaaa > 1:772202/1‑220 (MQ=255)
agcaTGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑CCGCGGGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCg > 2:243607/1‑238 (MQ=255)
tgtgGCCTTCAATGGGCTGGCGATACTGTTCGTTTTGCGCTACTGCGTGCGGACGGGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCAGCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑Tg < 1:1244675/239‑1 (MQ=255)
tGTTGCCTTCAAGGTGCTGTCGATCCTGTTCGTTATGGGCTACCTGGGGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGCGGTACG‑GGGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGGCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑Tg < 1:486595/239‑1 (MQ=255)
tCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCCCGG‑ATC‑GGTCTGCGTCGCCTGGGTCACCACTTTTTCGTTCTCCATCACTTTCCTGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGccacccc > 1:1026724/1‑237 (MQ=255)
gCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGACGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGCCGCCTGGGTCACCACTTTGTCGTTCTCCATCCCTTTCCTGGCACGGAACTGCCACACTTTG‑CTCGGCT‑TTCCATCCATGCCGTAg > 1:968307/1‑239 (MQ=255)
tGTCGATTCTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGc < 2:431286/238‑1 (MQ=255)
tCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTT‑ATCGGCT‑TGCCATCCCTGCCGGAGCggg > 1:1067329/1‑237 (MQ=255)
tCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGCCACCACTTTGTCGTTCTCCATCCCTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCCTACCGa > 2:719106/1‑238 (MQ=255)
tGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGGGTCTGGCg > 2:98778/1‑239 (MQ=255)
tGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGCCg > 2:815333/1‑239 (MQ=255)
gTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GGTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTACGGGAACGGAACTTCCACACTTTG‑TTCGGCT‑TTccatccctaacgaagcaagagtgggag > 1:119259/1‑218 (MQ=255)
tCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑CTC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTT‑ATGGGCT‑TGCCATCCATGccctcgacggtcttgcgaaa > 1:204094/1‑221 (MQ=255)
tCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCCACCTTTG‑ATCGGCT‑TGCAACCCATTCCGTACCAGGTCCGGGGGaa > 1:431954/1‑239 (MQ=255)
tCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGaa > 2:1081610/1‑239 (MQ=255)
tCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGaa > 2:395195/1‑239 (MQ=255)
tCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGaa > 2:11588/1‑239 (MQ=255)
tCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGGG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGACCGGAACTTCCCCACTTTG‑ATCGGCT‑TGCCATCCATCCCGTAGCGGGTCTGGCggca > 2:58519/1‑237 (MQ=255)
tCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGGG‑ACCCGCGG‑ACC‑GTTCTGCGTGACCTGGGTCACCACTTTGTCGTTCCCCATCACTTTCATGGAACGGCACTTCCACCATTTG‑ATGGGGT‑TCccaccccccccgaacgagacaccggggaa > 1:772017/1‑216 (MQ=255)
gTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGcaaa > 2:920757/1‑239 (MQ=255)
tATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTcc < 1:808181/189‑1 (MQ=255)
tATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTcc > 2:808181/1‑189 (MQ=255)
cTACTGCGTGCGGACGTGGACCGACAACCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCCC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCgg < 2:119259/238‑1 (MQ=255)
cTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGGCGTTCTCCATCACTTTCATGGAACGGCATTTCCCCCCTTTT‑ATGGGCT‑TGCCACCCATGCCCAACCGAGTCCGGGGGCaaaaaaacagc > 1:415871/1‑231 (MQ=255)
tggggggggACGTGGACCGACAATCGGCCTCCCCCCGGT‑CAGCAAATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCCC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTg < 2:1161429/232‑1 (MQ=255)
cgtgcgGACGTGGACCGCCAATCGACATCCCCCCGGT‑CAGCACATTGTTAAACTGCGGCA‑CTTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTC‑GGTG‑ACGTCCGG‑ACC‑GTTCTGCGTCGCCCGGGTCACCACTTTGTCGGTCCACATCACTGTCATGGCACGGAACTTCCAACCTTTT‑AT‑GGCTCTGCCATCCAACCCTCAACGAGTCTAGCAGAAAAAAAACCGcccatgc > 1:13201/1‑235 (MQ=255)
cgtgcgGACGTGGACCGACAATCGACATCCCCCCGGT‑CACCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑ACGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACACGCGG‑AGC‑GTTCTGCGTCGCCTGAGGCACCACTTTGTCGGTCTCCCTCACTTTCATGGCACGACAATTCCCCACTTTG‑ATCGGCT‑TGCAATCAATACCTGAGCGAGACTGGCGGAAAAAAAACGGCCCgggg > 1:655831/1‑238 (MQ=255)
tgcgGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGCGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGAG‑ACCCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGCTCTCCATCACTTTCATGGAACCGAACTTCCCCCCTTGG‑CTCGGCC‑TGCCACCTATCCCGGAGCAGAACTGGCGCAAAAAAACCGGcccgcggta > 1:495486/1‑233 (MQ=255)
tgcgGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGCACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCCGGTGa > 2:39162/1‑239 (MQ=255)
tgcgGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGATGCTGGCGGAAAATAACCGGCCCTGGTGa > 2:3659/1‑239 (MQ=255)
tgcgGACGTCGACCGACAATCTACATCCCCCCGGT‑CAGGACATTGATAAACTGCGGCA‑ATTCATCCAGCTAGGTAGG‑GCCCAGAAAGGTCACCAC‑TTT‑GGTG‑CCGCGCGC‑ATC‑GTTCTGCTTCGCCTGGGTCCCCCCTTTGAGTGTCTCCACCAATTCAATGGAAAGGAACTTCCACACTCTG‑ACCGTCG‑TGCCCTCACTCCCGTACCAAGTCTGGCGGAAAACAAACAGCCCCgggag > 1:886124/1‑236 (MQ=255)
tgcgGACGAGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTAACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACCCTTTA‑ATAGGCT‑TGCCATCCCTCCCGTAGCGAGACCGGCGTAAAATAACCGGcctggcgga > 1:1064850/1‑232 (MQ=255)
aCGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCAATTCCTGAGCAGGTCTGTCGGAAAATAAACGGccccgtgaaaagaa > 1:341365/1‑228 (MQ=255)
gACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ACCGGCT‑TGCCATCCATCCCGGAGCGAGGCTGCCGGAAAAAAAACGGCCCGGGGGAAcgggggtt > 1:508320/1‑231 (MQ=255)
cGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGCCT‑TGCCATCCATGCCCTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGGGAACTGGGttttcc > 2:1221743/1‑235 (MQ=255)
gcAATCGACATCCCCCCGGT‑CAGCACATTGATACACTGCGGCA‑ATTCATCCAGCGAGGCACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TACCATCCATCCCGTAGCGCGGCTGGCGGAAAAAAACACGCCCCAAGGAACAGAGATTCACCGc > 1:76329/2‑239 (MQ=255)
actcttcccATCCCCCCTGT‑AACCACTTTGCTAAAC‑GCGGCATCTTCCCCCGGGGGGGTCCG‑TGGCATAAGGTCCCCGCT‑TTT‑GGTG‑CCGCTGGG‑TTC‑GTCTGGGGTCGCCTGGGTCCCCACTTTGTCTGTCCCCACCACTTTCATGGAACGGACCTTCCTCTCTTTG‑AGCGGCT‑GGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGc < 1:77600/231‑1 (MQ=255)
acactccccttCCCCCCGGG‑AAGCACATTGAAAACCTGCGGCA‑AGTCACCCGGCGGGGTCCG‑GCG‑AAAAAGTTCCCCCCTTTT‑GGTG‑ACGCGGGG‑ATC‑GTTCGGGGTCGCTGGGTTCCCCACTTTGTCGTTCTCCAACCTTTCCATGGACCGGAATTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGAAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGc < 1:483506/229‑1 (MQ=255)
aCAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCg > 2:941718/1‑238 (MQ=255)
aCAATCGACACCCCCCCGGT‑CAGCACATTGATAACCTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGc < 2:1067329/239‑1 (MQ=255)
aCAACCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTG‑GGTG‑ACGGGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACCCTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGc < 2:118579/239‑1 (MQ=255)
acaaccagccccccccGGTGCAGCTCATTTATAACGTGGGGTG‑TTTCATCGAGGGAGGCGCG‑GTGCACAATGTTCCCCCC‑TTT‑GGTG‑ACGC‑CGG‑ATCGGTTCTGCGTCGCCTGGGTCAGCTCTTTGTCCTTCCCCAACACTTGCAGGGAACGGACCTTCCAACCTTTA‑ATCGGGT‑TGCCATCCATGCCGTAGCGAGTCTGGCGAAAAAGATCGGCCCCTGGGGAACTGAGTTTAACCGc < 1:39162/229‑1 (MQ=255)
cgccccccccccGGT‑CCGCACATGGACCACCTGCGCCA‑ATTCACCCACCG‑GGGACGCGGGCAGAAA‑TCCCCCCC‑TTT‑GGGGTACGCGCGG‑CTC‑GTTCTGCGGCCGCTGGGTCCCCCCTGTGTCGTTCTCCATAACTTTCAGGAAACGGAACTTCCAAAGGGGA‑ATGGGCT‑TTACATCCAGTCCGTGGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTAACCGCCAgcg < 1:1272435/233‑1 (MQ=255)
tCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGGGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑a < 2:1026724/239‑1 (MQ=255)
gT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑acagcaca > 2:100631/1‑238 (MQ=255)
t‑CAGCCAATTGAAAAACTGCGGCA‑ATTCACCCAGCGAGGTACG‑GGCCAGAAAGTTCCCCAC‑TTT‑GGGG‑ACGCGGGG‑ATC‑TTTCTGCGTCGCCTGGGTCCCCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑acagcacag < 2:1324555/238‑1 (MQ=255)
t‑CAGCACTTTGAAAACCTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCCCTTTCATGGAACGGAACTTCCACATTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑acagcacag < 2:290226/238‑1 (MQ=255)
cccaTTGATAACCTGCGGAA‑GTCCCCCCCGCGGGCTCGG‑CCGGAGAAA‑TTCCCCAC‑TTTGGGTG‑ACG‑GCGGCATG‑TTTCGGCGTCGCCTGGGTCCCCTCTTTGTCTGTCCCCAACCTTTTCAGGGAACGAACTTTCCACATTTGG‑ACCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGAAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCg < 1:395195/237‑1 (MQ=255)
cacaTTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCCCACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCCCCg > 2:736930/1‑239 (MQ=255)
caTTGAAAAACTGCGGAC‑ATTCATCCGGGGGGGTACG‑GGCAAGAAAGTCCCCCCC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCCCCACTTTGTCGTTCTCCATCCCTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCggg < 2:431954/239‑1 (MQ=255)
aTTGATAAACTGCGGCA‑ATTCATCCGGCGAGGTACG‑GCGAAGAAATTTCCCCAC‑TTT‑GGTG‑ACGGGGGG‑ATC‑GTTCTGCGTCGCCGGGGCCACCACTTTGTCGTTCTCCATCCCTTTCAGGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCgggg < 2:341365/239‑1 (MQ=255)
tGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCCCTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGc < 2:664905/165‑1 (MQ=255)
tGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCCCAGCACCgggggg > 2:756638/1‑237 (MQ=255)
tGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GATCTGCGTCGCCTGGGTCACCACTTTGGCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTATCGAGGCTGGCGGAACATACACGGCCCTGGTGAACGGACTTTCACCGCCACGGCAAA‑ACAACAAAGCACCCGGgaa > 1:266947/1‑238 (MQ=255)
tGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑ATTATGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGATTCTGGCGGAAAATACACGGCCCTGCTGAACTGAGTTTCAACGCCA‑CGGAATAAAAGCCCAGCACCGGGgaa > 1:503344/1‑238 (MQ=255)
aaCTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGccat > 2:1278033/1‑148 (MQ=255)
aaCTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGGGATca > 2:1110873/1‑238 (MQ=255)
aaCTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATca > 2:654329/1‑238 (MQ=255)
aaCTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTACCGAGTCTTGCGGAAAATAACAGGCCCTGGTGCACTGGGTTTCCCCCCCCCCCCACT‑acagaaaaacccccgggggaccaa > 1:1161219/1‑219 (MQ=255)
tccGGCA‑TTTCACCCAGCGAGGTCGG‑GGCCAAAAATTTCCCCAG‑TTT‑GGGG‑GCCCGCGG‑TTG‑TTTCGGGCGCGCCGGGTACACCCCTTTGTCGTTCCCCCTCATTTTCAGGGAGCGGACCTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTGGCGAGTCTGTCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATcagcag < 1:941718/237‑1 (MQ=255)
cGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGTAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGCGATcagcagca > 2:817706/1‑239 (MQ=255)
ttCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGATCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCCTCCATGCCGTAGCGAGTCTGGCGGCAAATAACCGGCCCTGGTGAACTGAGGTTCCCCCCCAGCGCCAT‑ACAGCAAAGCACCGGGGAGATCAAACGCAGAaaaa > 1:477123/1‑239 (MQ=255)
ccggtggTGCG‑GCGCTGTAATTCCCCCCC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTTTGGGTCCCCTGGGCCCCCCCTTTGTCGTTCCCCATCCCTTTCATGGACCGGACCTTCCACCCTTTG‑ATCGTCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGAAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGc < 1:817706/234‑1 (MQ=255)
cGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑acagcacagc > 2:3118/1‑205 (MQ=255)
taGGTACG‑GCGCAGAAATTTCCCCCC‑TTT‑GGTG‑ACGCGTGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCCCTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACAGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGc < 2:1317995/235‑1 (MQ=255)
ggtggg‑gCGCAG‑AAGTTCCCCCG‑TTTGGGTG‑CCGCGCGG‑ATC‑GTTCTGGGTCGCCTGGGGCACCATTTTGCCGTTCTCCATCACTTTCATGGAACGGACCTTCCACCCTTTG‑CTCGCCT‑TGCCATCCATGCCGTAGCGAGTTGGGCGGAAAATACCCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGc < 1:3659/233‑1 (MQ=255)
agggccaaGAAAGTTCCCCTG‑TTG‑GGTG‑ACGCGCGG‑ACC‑TTTCTGCGGCCCCTGGGTACCCACTTGGCCGTTCTCCATCACTTTCAGGGAACGGAACTTCCACCCTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGcaca < 2:1007850/231‑1 (MQ=255)
tt‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGTTCCCCATTTTGTCGTTCCCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAg < 2:1076047/239‑1 (MQ=255)
t‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCCACGCCAGCACAATGCCTTCCGccggcttgcgccgg > 2:514285/1‑226 (MQ=255)
gTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGGCGCCAGCCCAATGTCTTCCGCCGGTTTGTGCAGGCg > 2:348653/1‑239 (MQ=255)
cgcgG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCCCACTTTG‑ATCGGCT‑TGCCATCCATGCCGTATCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCCCAGCCCCGGGGAGATCAGCAGCAGCATAAGCGTCGCCACCCCACATTCATCCGCACGATTGAgagacgggctaac > 1:475204/1‑227 (MQ=255)
cgcgG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCCGAATAAGCGTCGCCAGCACAAATTCTTCCCCCCGTTTGAGCAGGCGGGTaa > 1:1076047/1‑238 (MQ=255)
cgcgG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGACCAGCCCCGGGGGGGTCAGCAGCAGAATAAGCTTCGCCAACCCAAAGGCATCCGCAAGGTGGaggaggagggaaa > 1:539129/1‑234 (MQ=255)
gCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGGGCAGGCGGTTAA‑CCCCGGAAAgcggc > 2:715055/1‑239 (MQ=255)
cGTCGCCTGGGTCACCCTTTTGTCGTTCTCCATCCCTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAGGCGGTTAA‑CCCCGGAAAgcggc < 2:957339/238‑1 (MQ=255)
ccTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCGCGGTTGAGCGGGGGGTTAA‑ACCCCGAAAgcgggggggag > 1:908358/1‑232 (MQ=255)
ccTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAGGCGGTTAA‑CCCCGGGAAGAGGCGTGTCg > 2:309656/1‑239 (MQ=255)
ccccttttGTCGTTCCCCATCACTTTCATGGAACGGAACTCCCACACTTTG‑ATCGGCT‑TGCCATCCAGGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAGGCGGTTAA‑CCCCGGAAAGCGGCGTGTCGTAAAGCgg < 2:495486/234‑1 (MQ=255)
ttGTGGTTCCACATCACTTACATGGAACGGAATTTCCACCCTTGA‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAGGCGGTTAA‑CCCCGGAAAGCGGCGTGTCGTAAAGCGGcaccac < 2:886124/239‑1 (MQ=255)
gTTCTCCCACACTTTCAGGGAACGGAACGTCC‑CCCTTTGAACCGGCT‑TGCCATCCTTGCCGTAGCGGGTCTGGCGGAAAATAACCGGCCCTGTGGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAGGCGGTTAA‑CCCCGGAAAGCGGCGTGTCGTAAAGCGGCACCACCGGTa < 2:13201/239‑1 (MQ=255)
ttCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAACCGTCGCCAGCCCACAGCCTTCCGCACGTTTTAGCAGGCGGGTAACCCCCGAAAAGCGCGGTGTGGAAAAGGGGccccccggga > 1:214964/1‑232 (MQ=255)
tCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAGGCGGTTAA‑CCCCGGCAAGCGGCGTGTCTTAAAACGGCACCACCGGTAGGCCGTTc > 2:819423/1‑239 (MQ=255)
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GGTAATGCCCGGTTTCACCTTATGGCGCAGCATGTAGCCTTCAATGAGCTGTCGATACTGTTCGTTATGCGCTACTGCGTGCGGACGTGGACCGACAATCGACATCCCCCCGGT‑CAGCACATTGATAAACTGCGGCA‑ATTCATCCAGCGAGGTACG‑GCGCAGAAAGTTCCCCAC‑TTT‑GGTG‑ACGCGCGG‑ATC‑GTTCTGCGTCGCCTGGGTCACCACTTTGTCGTTCTCCATCACTTTCATGGAACGGAACTTCCACACTTTG‑ATCGGCT‑TGCCATCCATGCCGTAGCGAGTCTGGCGGAAAATAACCGGCCCTGGTGAACTGAGTTTCACCGCCAGCGCAAT‑ACAGCACAGCACCGGGGAGATCAGCAGCAGAATAAGCGTCGCCAGCACAATGTCTTCCGCACGTTTGAGCAGGCGGTTAA‑CCCCGGAAAGCGGCGTGTCGTAAAGCGGCACCACCGGTACGCCGTTC > NC_000913/2120328‑2120796
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
