Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,534,597 |
G→A |
13.0% |
pseudogene (80/246 nt) |
yjhZ ← |
pseudogene, rimK paralog, C‑terminal fragment |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,534,597 | 0 | G | A | 13.0%
| 240.4
/ 6.7
| 99 | pseudogene (80/246 nt) | yjhZ | pseudogene, rimK paralog, C‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base G (24/59); new base A (12/2); total (38/61) |
| Fisher's exact test for biased strand distribution p-value = 8.71e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 101 total aligned reads displayed.
CTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGG > NC_000913/4534359‑4534832
|
tttaaaTTGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAAGTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAGAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAg < 1:996322/236‑1 (MQ=255)
atttttcctctgcGGCTTTTCCCTTCGGGAGATTATTCTCGTTTTGTTAAATCCAGAACCAAAATATGCTAACCCATCTGAGATGCTTGAAAAATTGAAGCCAAGCCTGATAAGTAATTTGTTTGAAAGGGTATTTGCCGGATGCACACCGGCTTTGATAAGTGAAAAACCGTTCTCGTTTATTCAGTCAGTCGTGGAGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCAAGGATAAGCgg < 1:638423/227‑1 (MQ=255)
ggCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACt < 2:1208896/239‑1 (MQ=255)
gCCTCATTGGCTTTTCCCTGTGGGAGATTATTCTCCTTTTTTTAAATGCCGAACATAAATATGCTCACACATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATTAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTg < 1:1326275/239‑1 (MQ=255)
cTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑a < 2:876452/238‑1 (MQ=255)
ttCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGGTTCAATTTCATAA‑CCC‑TTGCGAGCATAAAAGGGACGG‑ATGGGATAgagga > 1:349597/1‑235 (MQ=255)
tCCCTTCGGGAGATTATTTTCCTTTTGTTAAATCCAAAAAAAAAATTTGATCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAg < 1:998352/239‑1 (MQ=255)
ttcTTCGGGAGATTTTTCTACTTTTTTTAAATCCAGAAAATAAAATGGCTCACCCATCTTCGATTCTTGAAAAATTTAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAAGCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑c < 1:207589/237‑1 (MQ=255)
cGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTTGTTCAATTGCAAAT‑TCC‑TGGGCAGCATAATCCGGACGG‑ATGGTATAAGCGAG‑CCcaa > 2:3905/1‑238 (MQ=255)
cGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTTCATAT‑CCC‑TGGCGGGCCTAAACGGGACTG‑TATGTATATCCCGG‑CCaaaa > 2:286050/1‑239 (MQ=255)
tattCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCCAATGCATATACCC‑GGGCG‑GCAAAAACGGGAGTG‑ATGGTATAACCGGG‑CCAAAacaaaacac > 1:686270/1‑233 (MQ=255)
ctcttttttGTT‑AATCCAGAACTTTATTTTGGCTACCCTTCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGTTTTTTTCCGGATTCACACCGGTTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTg < 1:629735/234‑1 (MQ=255)
ccTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCCCACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAC‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCt < 2:962246/239‑1 (MQ=255)
ccTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCt < 2:907292/239‑1 (MQ=255)
ccTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTAGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCt < 2:425202/239‑1 (MQ=255)
ttttGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCCTAT‑CCC‑TGGGGGGCATAAACGGGACCT‑CTGGTTTAGCCGGG‑CCAAAACAAAACCCATTGCTgt > 2:496634/1‑238 (MQ=255)
tttGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGAc < 2:623486/239‑1 (MQ=255)
tAAATCCAAAACATAAATTCGCTCACCCATGTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACCCATCGCATTGCTGACGTaaa < 1:53091/239‑1 (MQ=255)
aTCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTTCTTCAATTTCCTAT‑CCC‑TTGCGGGCATAAACGGGGCTGTAGGGGATA‑CCGAG‑CCAAAAAACAAACCATTTCTAGCGTaaaaaa > 1:390548/1‑236 (MQ=255)
tCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAg < 2:1236288/185‑1 (MQ=255)
aaCATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCg < 2:283577/215‑1 (MQ=255)
acctAAATATGGTTACCTATCATCGGGTCTTGAAAAATTGAAGCCAATCCTGGTAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCAc < 2:666817/236‑1 (MQ=255)
aCATAAATTTTCTCCCCCATTTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACAACGGCTTTGATGAGTGAAAAACCGTTCTCTTTTAGTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCAc < 1:458068/239‑1 (MQ=255)
gCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACt < 2:294799/176‑1 (MQ=255)
cTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTTCTTCAATTGCATAT‑CCC‑TGGCGGGCATAAACGGGACTG‑ATGGTATAACCGAG‑CCAAAACACATCGCATTTCTGAGCTAAAAAGAAATCCCCAATCaaaaac > 2:651376/1‑237 (MQ=255)
cTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTTCCTAT‑CCC‑TGGCGGGCATAATCGGGACTG‑ATGGTATTGCCGCG‑CCAAAACACCTCGCCTTGCTGACGTAAATAGCTATCACCCATCaaaa > 2:1147166/1‑237 (MQ=255)
cTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCCTAT‑TCC‑TTGCGGGCATAAACGGGACTG‑ATGGGTTAGCCGAG‑CCAAAAAAAAACCCATTGCTGACGTAAAAAGATATTACCAATAaaaa > 2:508765/1‑237 (MQ=255)
cTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCCTAT‑CCC‑TGGCGGGCCTAAACCGGGCTG‑ATGGTATAGCCGGGCCCAAAACACACCCCATT‑CTGACCGAAAAAAATATACCCCATCAAAAc > 2:535140/1‑238 (MQ=255)
cTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGGTAAGCCGAG‑CCAAAAAACATCGCCTTGCTGACGTAAATAGAAATCCCCAATAaaaa > 2:911465/1‑237 (MQ=255)
aCCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGGGCATAAGCGGGACTG‑TTGGGATATCCGAG‑CCAAAACACAACGCATTGCTTCCGTAAAAAGAAATACCCaaaaaaaaaccac > 2:565516/1‑234 (MQ=255)
aCCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAACGGGGCTG‑ATGGTATAGCCGAG‑CCAAAAACCATCGCCTTGCTGACGTAAATAGTAATTACCAATCAAAACCTGc > 2:295751/1‑239 (MQ=255)
aCCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAACGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTTACGTAAATAGATATCACCAATCaaaaaccgc > 2:919618/1‑234 (MQ=255)
aCCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAAATGCTTCAATTGCAAAT‑CCC‑TGGCGAGCATAAGCGGGGCGG‑ATGGGTTAACCGAG‑CCAAAACCAAACCCCTTGCTGCGGGAAAAAGATATCACCaaaaaaaaacca > 1:1022578/1‑234 (MQ=255)
ccATTTTGGATGTTTGAAAAATTTAAGCCAATCCTAAAAAGAAAGTTTTTTGAAAGGGTTTTTTCCGGATTCACACCGGCTTGGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGt < 1:1147166/239‑1 (MQ=255)
ttttCGATGCTTTAAAAATTTAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCAt < 2:832907/237‑1 (MQ=255)
cGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATttgt < 2:349597/239‑1 (MQ=255)
tGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCCATTGCATAT‑CCC‑TGGCGAGCCTAAGCGGGACCG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTTCTGACGTAAATAAATATCACCCATCAAAACCTGCGTCATttgttta > 2:1152215/1‑237 (MQ=255)
tGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCCTAT‑TCC‑TTGCGAGCATAAGCGGGGCGG‑ATGGTTTAGCCGAG‑TCAAAACACATAGCATCTCTGACGTAAATAGAAATAACCAATCAAAACCTCCGTCATttgttgg > 2:615271/1‑238 (MQ=255)
tGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TTGCGAGCATAAGCGGGACTG‑ATGGGATAACCGCG‑CCAAAAAACAACGCCTTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTTTTGa > 2:1260476/1‑239 (MQ=255)
tGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCt > 2:1208556/1‑195 (MQ=255)
tGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCt < 1:1208556/195‑1 (MQ=255)
cTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACTCATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACa < 2:1087589/239‑1 (MQ=255)
aTCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATcg < 2:703918/239‑1 (MQ=255)
taTAAGTAATTTTTTGGAAAGGGTTTTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGGGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGc < 1:911465/238‑1 (MQ=255)
gttAATTATTTTTTTTGAAAGTGGTTTTTCCGGGTTACCCCCGGTTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGc < 1:496634/237‑1 (MQ=255)
gATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGc < 2:397978/239‑1 (MQ=255)
gATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAG‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGc < 2:167268/239‑1 (MQ=255)
gATAAGTAATTTGTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGGCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGc < 2:1141938/239‑1 (MQ=255)
ataaagaaTTTTTTTGAAAGGGTTTTTTCCGGATTCAACCCTGCTTTGAAGAGTGAAAAACCGTTTTCTTTTATTCAGTCAATCGGGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCa < 1:21896/233‑1 (MQ=255)
ttttttttAAAGGTTATTTTCCGGTTTCACCCCGGTTTTGATGAGTGAAAAACCGTTCGCTTTTATTCAGTCAATCGGGGGGGGAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAg < 1:1097964/239‑1 (MQ=255)
tttttGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTTCCTAT‑CCC‑TTTCGAGCATAAGCGGGACTG‑ATGGTATATACGAG‑CCAAAACACACCCCACTGCTGACGTAAATAGATATTACACATCAAAAACCGCGCCACTTGTTTACCCAGGGCAATTAAACATcacagccaaaagtaaaaa > 1:284593/1‑222 (MQ=255)
tttttGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGaa < 2:348310/239‑1 (MQ=255)
tttGAAAGGGTTTTTGCCTGATTCACGCCGGGTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACt < 2:516750/239‑1 (MQ=255)
tGAAAGGTTTTTTACCGGATTCCCGCCGGCTTTGGATAGTGAAAACCCGTTTCCTTTTATTCAGTCAATCGTGGCGGTAATTGCTGAAATTGCATAT‑CCC‑TGGCGGGCAGAAGGAGGTCTG‑AGGGTCTAGCCGGT‑CCAAAACACATTGCATTGCTGACTTGAATAGATATAACCAATAAAAACCGTCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTcc < 1:1028234/239‑1 (MQ=255)
ttttCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGAcc < 2:57935/239‑1 (MQ=255)
ttttCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGAcc < 2:390548/239‑1 (MQ=255)
ttgcGGAGTCACACGGGGTTTGGGGGGGAAAAAACCGTTCTATTTGATTCAGGCAATCGGGGCGGGAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAAGCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCt < 1:1152215/236‑1 (MQ=255)
ttCCGGATTCACCCCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCt < 2:686270/239‑1 (MQ=255)
aTTCACACCGGCTTTGATGAGTTAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCAt < 2:701138/174‑1 (MQ=255)
ttGATGAGTGAAAAACCGTTCTCTTTTATTCCGGCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑GGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACCCATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCGGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAAc < 2:86526/239‑1 (MQ=255)
tggTGAAAAACCTTTCTTTTTTTTTCAGTCAATCGTGGGGGTAATTGCTTCAATTGCAAAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGccc < 1:535140/237‑1 (MQ=255)
ggggtaaaaaCCGTTCTTTTTTTTTCAGGCAATCTGGGCTGGAATGGCGTCAATTGCATAT‑CCC‑TGGCGGGCATAAGCGGGACTG‑AGGGGATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCGCAGCAAGACCCTGTAAATAATTCTGTGTAACTGccc < 1:3905/234‑1 (MQ=255)
gaGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGccc < 2:482765/239‑1 (MQ=255)
gaGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGccc < 2:452938/239‑1 (MQ=255)
gTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAACGGGACTG‑ATGGTATAGACGAG‑CCAAAACACATCGCATTTCTGACGTAAATAGATATCACCAATCCAAAACTCACGCATTTGTTTACAAAGCCCAATTGAAAATCGCGAGCAAGGGTAAAAACTCCCAGCCAAACCCTGTAAATAATTCTATTTAACTTccccc > 2:619790/1‑237 (MQ=255)
tGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAACCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCCCGAGCAAATGTAAAAACTCCCAGCCAGACCCTGTAAAAAATTCTTTGTAAATTCCCAcc > 2:256038/1‑238 (MQ=255)
aaaacCCGTTCCTTTTTTTTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTACCTGCCCACGAt < 1:651376/239‑1 (MQ=255)
ttCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCAAAAACGGGAGTG‑ATGGAATAGCCGGA‑CCAAAACCAATCGCCTTTGCGACGTAAATAGATATAACAACACCAAACCCGCGCCCATTTTTGAACAAGGCGAAATGTAAATACAGAGCAAGGGTAAAAAACCCCAACAAACACCTGGAAACAAATTTGCGTAACTGCCCACGCATaaaagag > 1:12065/1‑235 (MQ=255)
ttttttCAGTCCATCGGGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCAGAAGCGGGACTG‑ATGGGATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCt < 1:286050/239‑1 (MQ=255)
tttATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCt < 2:858124/239‑1 (MQ=255)
ttCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGGCTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGAAAATAGATATCACCAATCAAAAACTGCGTCATTTGTTGACCATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCCACAAGACCCTTTAAATAATTTTGTGTAAATTCCCCCCATTAAAGGTGGCCGCTccga > 2:1143063/1‑236 (MQ=255)
cAATCGGGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGGGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCa < 2:527568/239‑1 (MQ=255)
aaTGGTGGGGGGAATTGCTCCAATTGCAAAG‑CCCGTGTCG‑GCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAATCCCATCGCATTGCTGACGTAAATAGATAGCCCCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCa < 1:251564/238‑1 (MQ=255)
gTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTa < 2:478087/239‑1 (MQ=255)
cgggggtgatttgttgtaaTTGGATAT‑CCC‑TTGAGGACATAAGCGGGGCTT‑ATGGATAAGCCGAA‑CCAAAACACGTCGCAATTCTAACGTAAATAGATATCATCAAACAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAAGAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTa < 1:619790/222‑1 (MQ=255)
ggCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTAtt < 2:172817/239‑1 (MQ=255)
gCGGTAATTGCTTCAATTGCATAG‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGGA‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTAtt < 2:968714/238‑1 (MQ=255)
cttAATTTCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACCCATCGCATTGCTGACGTAAATAGATATCACCAACCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGa < 1:295751/237‑1 (MQ=255)
tgtagtgtcttaatgtgaaat‑CCC‑GGGGGAGCATAAAGGGGAATG‑TGGATATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAAGCAAAACCTGCGACATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGa < 1:558239/219‑1 (MQ=255)
gCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATaaa < 2:1022578/239‑1 (MQ=255)
cttttgcttcccc‑TGGAGAACATAAAGGGGATTT‑ATTGGTTAGCCGAG‑CCAAAACACATCGCCTTGCTGACGTAAATTGATATCCGCAATCAAAACTTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGt < 1:919618/229‑1 (MQ=255)
tat‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTTAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGcc > 1:160726/1‑180 (MQ=255)
tat‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGcc < 2:160726/180‑1 (MQ=255)
tat‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGcaa > 2:411419/1‑239 (MQ=255)
c‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGccc < 2:135119/176‑1 (MQ=255)
c‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGGGTAACTGccc > 1:135119/1‑176 (MQ=255)
tGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGAcc < 2:959068/149‑1 (MQ=255)
tGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGGGTAAGAACTCCCAGCAAGCCCATGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGCCGGTCACCGTATTCGTTAATAAATGGGTCTGGAAAAAGTgc > 2:1052223/1‑239 (MQ=255)
tGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCAAATTGAATATCGCGAGCAAGTGTAAGAACTCACAGCAAGAcc > 1:959068/1‑149 (MQ=255)
gCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGTAATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGAAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTgca > 2:1166594/1‑238 (MQ=255)
gCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCCATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTACGAACTCCCGGCAAGACCCTGTAAATCATTCTGTGTAACTGACCACGTTTAAAGGTGGCCGTCCAGGCGGTAACCGTATTGTATAATAAATGGGTCGGGAACAATTgcag > 1:755615/1‑239 (MQ=255)
gCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGGgcag > 2:1077954/1‑239 (MQ=255)
cATAAGCGGGACTG‑ATGGTATAGCCGCG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTTCCCACGATTAAAGTGGGCCCCCCAGGCGGTACCCGAATTCGATAAAAAATGGGCTTGAAAAAAgagacaaa > 1:1108002/1‑229 (MQ=255)
cATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGccc < 2:1205134/168‑1 (MQ=255)
cATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGccc > 1:1205134/1‑168 (MQ=255)
cATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTgcagca > 2:744202/1‑236 (MQ=255)
cATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAAAGGGCTTGGAAAAAGGgcagca > 2:1246846/1‑236 (MQ=255)
cATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCCTCATTTGTTGACAATGACCAATTGAATATCTCCAGCAACGGTAAAAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCCCAGGCGGTCACCCCATTCCATAAAAAAGGGGCCTGGAAAAAgcgacagacca > 1:1194910/1‑229 (MQ=255)
cATAAGCGGGACTG‑ATGGAATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGAAAGGGTAAGAACTCCCAGCAAGACCCTGTAACTAATTCTGAGTAACTGCCCACGATTAAAAGTGGCCGCTCAGGCGGGGCACGAATTCGATAATAAATGGGGCTGGAAAAAGGgcagcc > 2:1192728/1‑235 (MQ=255)
tAAGGGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTgg < 2:1108002/239‑1 (MQ=255)
|
CTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATAT‑CCC‑TGGCGAGCATAAGCGGGACTG‑ATGGTATAGCCGAG‑CCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGG > NC_000913/4534359‑4534832
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
