Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,631,506 |
A→G |
10.6% |
E258G (GAG→GGG) |
slt → |
lytic murein transglycosylase, soluble |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,631,506 | 0 | A | G | 10.6%
| 244.8
/ 5.0
| 106 | E258G (GAG→GGG) | slt | lytic murein transglycosylase, soluble |
| Reads supporting (aligned to +/- strand): ref base A (31/62); new base G (10/2); total (42/64) |
| Fisher's exact test for biased strand distribution p-value = 1.27e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 107 total aligned reads displayed.
GATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGAATACCTGGCTGGCGCGT > NC_000913/4631271‑4631744
|
gATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGGG‑GCGTTTGCCAGTGTGGCGCGGCCGGATGCTGGGaa > 2:450223/1‑239 (MQ=255)
ccGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACATGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTACCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGTGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGCTTGCCCGTGTGGGCCGGCCGGCAGCTGAGTATGc > 2:101003/1‑239 (MQ=255)
ccGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGGG‑GCGGTTGCCAAGGGGGCGCGGCCGGATGCTGAGAAAGc > 2:2045/1‑239 (MQ=255)
atgtgtataagagaacggCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATg < 2:1251661/221‑1 (MQ=255)
cccgggtgtttttatggCGTTTCCGTCTGGGGATGAAGTGGGGTAACCACGGCCTGGTAACAGTGGTGGCAGGGCAGATGCCTGCCGATTCCCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCa < 1:1104404/223‑1 (MQ=255)
tcTGGTGTATTTAGGGCCTAGCCGGCTGGTGATGAAAGCGGGTCACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTCCCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCAc < 1:411306/238‑1 (MQ=255)
gtgcgtttttagggctgttcgggcTGGGGATGAAAGCGGGTAACACAGGGCTGGTAACGGGGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACgg < 1:576163/216‑1 (MQ=255)
atttagggcggtgccggtgggCGATGAAAGGGGGTAAACCGGGCCGGGTAACAGGGCTGGCAGGGCAGATGCCTGCAGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCGTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCAc < 1:1124029/212‑1 (MQ=255)
atcGTTTCCCTCTGGGGATGAAAGCGGGTAACCCAGGCCTGGTACCAGGGTTGGCAGGGCAAATGCCTTCAGATTGCCAGAATATCGCCTCGGCAATCATCTCTCG‑GGCGAAAATCCCTAATACGGTACTGGCCTTCGCGCGTACAACTGG‑CGCGACCGATTTGACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑acc < 1:1285689/236‑1 (MQ=255)
agCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGGGCGGCGGGGTGCTGGGAATGCACGGGTGATGAT‑CCCa > 2:259821/1‑239 (MQ=255)
agCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGGG‑GCGGTTTCCAGGGTGGGGCGGCAGGATGCTTGGAAAGGACGGCTGGTGAT‑ccc > 2:967149/1‑238 (MQ=255)
agCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGGG‑GCGGTTGCCAGTGGGGCGCGGCCGGGTGGTTGGAATGGCCGGCGGATGAT‑ccc > 2:1181244/1‑238 (MQ=255)
tATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGCTTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTTCCCGTGTTGCGCGGCCGGATGCCTAGGATGCCAGGCCGGTGAT‑CCCGTc > 2:1124029/1‑237 (MQ=255)
aTCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCCGGTTTGCGCGGCAGGATGCTGGGAATGCACGGCTGATGAT‑ccccacg > 2:70266/1‑233 (MQ=255)
gCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCCGTGTGGCGCGGCAGGATGCTGAGAATGCAAGGCCGATGAT‑CCCACCCC‑TTTCCCACgc > 2:1227291/1‑239 (MQ=255)
gttaaGCGGGTACCACGGCCCGGGTAACAGTTCTGGCAGGGCGTAGGCCCGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAAGTCGGGTCTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCTTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCgc‑ag < 1:999016/236‑1 (MQ=255)
ggaaGGGGGTAAGTCAGGCCTGGGAACAGTGCTGGGAGGGGAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAAGCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCgc‑ag < 2:294177/236‑1 (MQ=255)
gAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCgc‑ag < 2:533208/238‑1 (MQ=255)
gAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCgc‑ag < 2:386066/238‑1 (MQ=255)
gCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGGTTGCCAGGGTGGCGCGGCAGGATGCTGAGAATGCACGGCCGATGAT‑CCCATCCC‑TTGCCCAGGGGG‑AGCCGCTTAATGaaagacaa > 2:146534/1‑233 (MQ=255)
ctcgcagtgcagATGCCTGCCGATTACCAGACTATCGCCTCGTCAATCATTTCACT‑GGCGGACAACCCTCATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGGCCAATGGCGTCGGCG‑TGCTTTGACGATGTGGCGCGGAGGGGTGCTCAGAAAGCACGGCTGA‑GATACCCATCGCGTAGCCCA‑GCGCTAGCA‑CGCAACGAAGATCAGAATCAgaggcggcc > 1:287681/4‑231 (MQ=255)
cTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGGGCGGCAGGATGCTTGGAATGCACGGCTTATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTgg > 2:834719/1‑237 (MQ=255)
tGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTgcg < 2:951581/238‑1 (MQ=255)
tgcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGc < 2:834584/238‑1 (MQ=255)
tgcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGCGTGGCGCGGCAGGACGCTGAGAATGCGCGGCTGATGTG‑CCCATCGC‑TTTCCCACACGC‑CGCCACCTAATTAAGATCACATTACGGAGCTGcgcgcaatcagccgc > 1:1208235/1‑228 (MQ=255)
tgccttttcccAGATTTTTGCCTCGGAAATCA‑TTCTCTGGGCGAACCACCCTAATCCGGTACTGACCTTCGCGGGTACAACTGG‑CGCGACCGGTTTTACCCGGCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGc < 1:259821/230‑1 (MQ=255)
tgccGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTTCCAGTGTGGCGCGGCCGGAGGTTGCGAATGCCCGGCTGATGAT‑CCCCTCGC‑TTGCCCCGGCGC‑CCGCGCTTAATGAAGAACAGATTCCGGAGGGGcgcggatacgcccccgggg > 1:1312864/1‑224 (MQ=255)
tgccGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGGGAATGCACGGCTGATGAT‑CCCATCCC‑TTGCCCCGGGCC‑AGAAGCTTAATTAAAACCAGATTTAGGGGCTGGGCGGTAt‑cgtgccccggg > 2:27245/1‑231 (MQ=255)
gccGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCg < 2:256791/239‑1 (MQ=255)
aCCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACgg < 2:559732/152‑1 (MQ=255)
aagcttccgccgcGGCAATTATTTCACT‑GGCGAAAAACCCCAATACGGTACTGGACTGCGCGCGTAAAACGGG‑CGCGCCCGATTTTACCGGTAAAATGGCGGCGGTG‑GCGTTTGCCAGTGGGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGc < 1:834719/232‑1 (MQ=255)
cTATCCCCTCGGCAATCATTTCAAT‑GGCGAACAACCCTAATTCGGTACTGCCCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGc < 2:680679/236‑1 (MQ=255)
tgagtgctcgggcacgttttCCCG‑GGCCAACAACCCTAACGCGGTAGTGACCTTCGGTGGTACAACTTG‑GGAGACAGGTGTTACCGGTCAAGTGGCGGCGGTG‑GTGTTTGCCAGTGGGGGGCGGCAGGATGGTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TGGCCCAGGCGC‑AGCAGCTTAAAGAAGATCAGACTCAGGAGCTGCGCGATAT‑GGTCGCCTGGCGTTTGATGGGCAACg < 1:1232508/222‑1 (MQ=255)
tCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAt > 2:911600/1‑239 (MQ=255)
tCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGGTTGCCAGTGGGGGGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCCGGCGC‑AGCAGCTTAATGAAGATCCGATTCAGGAGCTGCGCGGTAT‑CGTCGCCCGGCGGTTGATGGGCAACGAt > 2:1276653/1‑239 (MQ=255)
gCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑Gt < 2:638745/239‑1 (MQ=255)
caccctatttccgttcgtggcTTCGGGCGTACAACCGG‑GGCGTCCGATTTTACCCGGCAAATGGCGGCGGGG‑GCGGTTGCCAGTGGGGCGCGGCAGGATGCTGAGAATTCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGTTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGa < 1:27245/219‑1 (MQ=255)
cccTAATTCGGTACTGGCCTTCGGGGGTACAACTGG‑CGCGGCCGATTTTACCCGGCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATg < 1:967149/239‑1 (MQ=255)
cccTAATGCGGTACTGGCCTTCGGGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATg < 2:1038186/239‑1 (MQ=255)
ccTTATACGGGCCTGGCTGTCGCGCGGACAACTGG‑CGCGGCCGAGTTTACCCGTCAAATGGCGGCGGTG‑GCGGTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGa < 1:146534/239‑1 (MQ=255)
ccTAATACGGTGCTGACCGTCGCGCGTACAACTGG‑CGGGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCATTGTGGCGCGGCAGGAAGCTGAGAATGAACGGCTGATGAA‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAg < 2:362033/219‑1 (MQ=255)
cTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGGTAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTACCCGACGAGCAGGGGAAATGGGGcgacga > 2:950894/1‑238 (MQ=255)
ttttgcggttctgtactggcggtgTACAACGGG‑CGCGGCCGTTTTTACCCGTCAAATGGCGGCGGTG‑GGGTTTGCCAGTGGGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCCGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACg < 1:1227291/216‑1 (MQ=255)
tACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCCGGGTGGCGCGGCAGGATTCTGAGGATGCGCGGCTGATGGT‑CCCATACC‑TTGCCCCGGGCC‑CGCAGCGTAATGGAGATAAGATTCCGTAGCGTCGCGCTAT‑GCGCCCCTGGCGTTTGATGGGCACAGATGGTCACGCCCGAGAAGCCGAAAGGGGCGGAGGACGccgtaaa > 1:552135/1‑234 (MQ=255)
tACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATTAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTTGCGTTTGATGGGAAACGGT‑GTCACCGACGAGCAGGCGAAATGGCGCGATggcccccattt > 2:861951/1‑228 (MQ=255)
tACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTTATGGGCAACGAT‑GTCACCGACGAGCCGGCCAAAAGGGCCGGTGACGCCCTTAtt > 2:449119/1‑238 (MQ=255)
tACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACCAT‑GTCACCGCCGAGCAGGCGAAATGGGGCGGTGAAGCCATTATg > 2:222038/1‑239 (MQ=255)
tACTGACCTTCGCGCGTACAACGGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGcc < 2:1190057/122‑1 (MQ=255)
tcggACCTTCGGGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg < 2:372553/235‑1 (MQ=255)
ggtccTTCGGGCGTACACCGGG‑CGCGACCGATTTTCCCCGGCAAAGGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATgcgc < 1:1011324/236‑1 (MQ=255)
cttccctCGCGTGTACCACCGGCCGCG‑CCGATTTGCCCCGTCAAAGTGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGAAGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATgcgc < 1:394161/233‑1 (MQ=255)
aCCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCCGTGTGGCGCGGCCGGGTGCTGAGAATGCCCGGCTGCTTGT‑CCCCTCGC‑TTTCCCCGGCGC‑CGGCGATTAATTACGGTCAGATTCCGGGGCTGCGCGCAATCCGTCCCCT‑GCGCTTTAGTGGCACACAT‑TTCCCCGCCGCGCAGGGGAAATGGCGCCAGTACGCCATTATgcgccc > 1:311483/1‑237 (MQ=255)
aCCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCCGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGCGGCCACTTTGCGCt > 2:900464/1‑238 (MQ=255)
taggggacagcAACTGG‑CGCGACCGATTTTGCCCGGCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCa < 2:564879/229‑1 (MQ=255)
cgcgcgTACAACTGG‑CGCGACCGCTTTTACCCGTCAAATGGCGGCGGTG‑GCGATTGCCAGTGCGGCGCGGCAGGAGGCTGAGAATGCCCGGCTGATGGT‑CCCATCGC‑TTGCCCCGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGGGCCGCGCGGTAT‑CCTCCCCTGGCGTGTGATCGGCCAACAT‑GTCACCGACGAGAAGTGGCAATTGTGCGGTGAAGGCAGTATGGCCTC‑GCaa > 1:833318/1‑238 (MQ=255)
cgcgcgTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GGGTTTGCCAGTGTGGCGCGGCAGGGTGCTGGGAATTCCCGGCCGGTGAT‑CCCAACCC‑TTTCCCACGCGA‑CACGGCTTAAAGCAAGTCAGGTTCAGGAGCGTCGCCGAAA‑CGTGCCCCGGGGTTTGATAGGCAACGAT‑GTCACCGACGAGCAAGCGGAAGGGcgcggcggacccacgatgggcgcccga > 1:83855/1‑215 (MQ=255)
cgcgcgTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGGCGCCTGGCGGTTGATGGGCAACGAT‑GTCACCGACGGGCAGGCGAAATGGCGCGGTGACGCCATTATGGGCCC‑GCaa > 2:1157047/1‑238 (MQ=255)
cgcgcgTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGGGTGGCGCGGCAGGGTGCTGAGAATGCACGGGTGTTGAT‑CCCCTCGC‑CTGCCCCGGCGC‑CGCAGGTTAATGAAGATCAGGTTCCGGGGCTGCGCGATAC‑CGCTGCCCTGCGTTTTATGGGCACAGCA‑GGAACCCACGACAAGGCGGAATGGCGGGACGACGACACTATgggccaccaa > 1:578708/1‑232 (MQ=255)
cgcgcgTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGGGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCCGGGCG‑AGCCGCTTAATGAAGATCAGGTTCAGGGGCTCCGCGCTAT‑AGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCCCCCACAGGCAGCCGAAATGGGGCGGTGAGGCCCTTATGGGCCC‑CCaa > 1:906086/1‑238 (MQ=255)
cgcgcgTACAACTGG‑CGCGACCGATTTTACACGTCAAATGGCGGCGGTG‑GCGTTTGCCACTGTGGCGCGGCAGGATGATGAGAATTACAGGCGGTATAT‑TCCATCGC‑TTGGCCAGGCGG‑CGCAGCTTAATTAAAGACAAATGTAGGAGCTGCGCGATAA‑TGACGCCCGGCGGTTGAGGGGGACAGCT‑GTTCCCAAGCGGCCGGCGGAAAGGCCCGATGACCCCCTTATgccgcgcaaa > 1:789155/1‑230 (MQ=255)
cgtcacaCTGG‑CGGGACCGTTTTTACCCGGCAAAGGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTAc < 1:1009866/233‑1 (MQ=255)
cgTACAACTGG‑CGCGACCGATTTTCCCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTAc < 2:1208235/239‑1 (MQ=255)
cgttcatctggtggtgcggttttgACCCGTGAAATGGGGGCGGTG‑GCGTTTGCCAGGTTGGCGCGGCAGGAGGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTAc < 1:72063/219‑1 (MQ=255)
ttcAACTGG‑GGCGACCGATTTTATCCGTCAAATGGCGGGGGGG‑GTGTTTGCCAGGGTGGCGGGGCCGGATGATGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACtt < 1:168221/237‑1 (MQ=255)
atcTGG‑AGCGACCGATGTTACCCGGCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGc < 2:722913/237‑1 (MQ=255)
aaCGGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCAGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCAGCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGc < 2:185557/239‑1 (MQ=255)
aattggcggggtcGATTTTACCCGTCAAACGGGGGCGGGG‑GGGTTTGCCAGTGTGGCGCGGCAGGATGGTGAGAATGCACGGCTTATGAT‑ACCATCGC‑TTGCCCAGGCGC‑GGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGc < 1:718627/227‑1 (MQ=255)
ggccGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGaa < 2:1312864/236‑1 (MQ=255)
gACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGaa < 2:311483/238‑1 (MQ=255)
gACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGaa < 2:459731/238‑1 (MQ=255)
aCCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGGTGCTGAGAATGCAAGGCTGGTGAA‑CCCATCGC‑TTGCCCACGCGC‑AGCCGCTTAATGGAGGTCAGAGTCAAGAGCTGCCGCAGAT‑CGGCCCCTGGGGTTTGATGGGGAACCGT‑GGCACCGAAGGGCAGGCCGAATGGGGCGCATACGCGCTTATGCGCTG‑GCAATATAccacgcctgactttta > 1:564879/1‑224 (MQ=255)
aCCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGc < 1:147443/146‑1 (MQ=255)
aCCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGc > 2:147443/1‑146 (MQ=255)
ccGATTTTACCCGTCAAATGGCGGCGGTG‑GCCTTTGCCAGTGTGGCCCGGCAGGATGCTGAGAATGCACGGCTGATGAA‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACg < 2:889843/238‑1 (MQ=255)
ccGATTTTACCCGGCAAATGGGGGCGGTG‑GCGTTTGCCAGTGGGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACg < 2:165546/238‑1 (MQ=255)
ggttttCCCCG‑CAAAAGGGGGGGGTGTGGGTTTGCCAGTTGGGCCGGGCAGGATGCTGGAAATGCACGGCTGATGGT‑TCCATCGC‑TTGCCCAGGCGG‑AGCAGGTTAATGAAGATCAGATTCAGGAGCTGCGGGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCg < 1:450223/237‑1 (MQ=255)
tttACCCGTAAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCgtgt < 2:578708/239‑1 (MQ=255)
ccGGCAAATGGCGGCGGTG‑GGCGTTGCCAGGGTGGCGCGGCAGGAGGCTGAGAATGCGCGGGTGAGTAT‑CCCATGGC‑GTGCCCCGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGTGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAG‑GGCACCGACGAGCAGGCGAAATGGGGCGATGACGCCGTTATGCGCTC‑GCAATCTTCTTCGCTTATTGAACGCCGTGTACGaa < 1:1254762/239‑1 (MQ=255)
aagtGGGGGCGGTG‑GCGTTTTCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGgcg < 1:911600/236‑1 (MQ=255)
aaaTGGCGGGGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGgcg < 2:1265760/239‑1 (MQ=255)
ggggTG‑GCGTTTGGCAGTGTGGCGGGGCAGGATGCTGGGAATGCCCGGGTGATGAG‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCa < 2:610236/236‑1 (MQ=255)
ttGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTAt > 2:773962/1‑199 (MQ=255)
ttGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTAt < 1:773962/199‑1 (MQ=255)
ttGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑CTGCCCAGGCGC‑AGCAGCTTAATGAAGATAAGATTCCGGAGCTGCGAGCTAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTAACCCACGAGCTGGAGACCTGGCGGCCTGAGGCCATT‑TGAGCCCTGCAACCCTCTTCGCTCTTTCAAGTCCGTGGCCCAATGGCGCTGGGccccacccatcc > 1:419311/1‑230 (MQ=255)
tGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCCCGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGAtcgtc < 2:1195741/239‑1 (MQ=255)
gccggtgtggccgggcggagtcgtGAGAATGCCCGGCTGAGGAT‑CCAGGCGC‑TTGCCCGGGCGC‑AACAGCTTAAGGAAGATCAGACTCAGGAGTGGCGCGACAT‑CGTCGCCTGGCGTGTGATGGGCAACGAT‑GTCCCCGACGAGCAGGCGAAATGGCGCGATGACGCCATTAGGCGCTC‑GCAATCTACGTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGAtcgtcg < 1:831917/216‑1 (MQ=255)
gtggttgattagggacaggttgtGAAAATGCACAGAGTATGAT‑CCCATCAC‑TTGCACAAGGGG‑CTCAGCTTAATGAAGAACAGGGTCAGGAGCTGCACGATTG‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATTGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTcgc < 1:374330/217‑1 (MQ=255)
ccgtttggtggcgGCAGGATTATTATGATGACCGGGTTATGAT‑CCCAGCGA‑TTGCCCTGGCGT‑GGCACGTTAATGAAGAGCAGATTCAGGATGTGCGCGATAT‑CGTCGCCTGGCGGTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCAATAGTcgc < 1:1082142/229‑1 (MQ=255)
agggacaggCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTcgc < 2:775788/232‑1 (MQ=255)
gtgtGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCgg > 2:1076171/1‑238 (MQ=255)
gtgtGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCCCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGTTCGTCGCgg > 2:262250/1‑238 (MQ=255)
gtgGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCt < 2:23138/239‑1 (MQ=255)
tgGCGCGGCAGGATGGTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGAc < 1:874908/158‑1 (MQ=255)
tgGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGAc > 2:874908/1‑158 (MQ=255)
cgcgGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGaa < 2:833318/238‑1 (MQ=255)
cgcgGAAGGATGCTGAGAATGCCCGGCTGATGGT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGaa < 2:752787/238‑1 (MQ=255)
cAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGCGTACGAATGGCGCTTGGCACCGGCCATAGTCGGGGCCTGAATACctg > 2:546561/1‑239 (MQ=255)
cAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGGCGCCTGGCGTTTTATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCCTTATGGGCGC‑GCAATCTACTTCGCTTTTTGAAGTCCGTGTACGAAAGGCGCTTGGCACCGCGGACCCTCGCGCCCGGACAACctg > 1:1055528/1‑239 (MQ=255)
tGAGATTGCCCGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGGCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGAATACCTGGCTGgcg < 2:514480/238‑1 (MQ=255)
agaATGCCGGGTTGAGTAT‑CCCACCGC‑GTGCCCAGGCGT‑AGCAGCTTAATGAAGATCAGATTGAGGAGCTGCGCGATAT‑CGTCGGCTGGCGTTTGATGGGCAACGTT‑GTCACCGACGAGCAGGCGAAATGGCGCGAGGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTAGTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGAATACCTGGCTGGCGCGt < 1:222038/239‑1 (MQ=255)
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GATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACT‑GGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGG‑CGCGACCGATTTTACCCGTCAAATGGCGGCGGTG‑GCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGAT‑CCCATCGC‑TTGCCCAGGCGC‑AGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAT‑CGTCGCCTGGCGTTTGATGGGCAACGAT‑GTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTC‑GCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGAATACCTGGCTGGCGCGT > NC_000913/4631271‑4631744
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
