Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F27 I0 R1
|
83 |
86.1 |
2053078 |
89.1% |
1829292 |
215.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,085,014 |
T→C |
14.5% |
E171G (GAG→GGG) |
yeeE ← |
UPF0394 family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,085,014 | 0 | T | C | 14.5%
| 163.2
/ 3.4
| 73 | E171G (GAG→GGG) | yeeE | UPF0394 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (20/40); new base C (7/5); total (27/46) |
| Fisher's exact test for biased strand distribution p-value = 1.17e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTG > NC_000913/2084780‑2085241
|
ttAATTTTTTTGATGGCACCCGCGACCAGAAATTGCAGAATATTTGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCttt < 1:15825/239‑1 (MQ=255)
tgaaTGTAGTTCAGGTCCCCCGCGACCAGAAATTGCAGGATATTGGCCGTTGGGAAAGGGATTCCGAACCCAAACATGCGTCCGGTTGCTTCCCTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCttt < 1:77872/237‑1 (MQ=255)
tAATGTATTTCATGTCACCCGGGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCttt < 2:237594/238‑1 (MQ=255)
tAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGTAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCttt < 2:867803/238‑1 (MQ=255)
aattCATGTCCCCCGCGACAAGAAATTGCAAAATATTGGCCGTGGGGGAAGTTATTCCTAACCCAAACAGGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATcac < 2:495924/236‑1 (MQ=255)
ttCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCCGGGGCCCGGCTAAAAGCCCAATCAAACCGCTGAGTCCACCTGTGACAAAGGGATGCAACCGTTTTTCAAACAGAATATAAGGGATCCCGGTTCGTGCCGGCGGTAAGGTGACGCCTTGTAGTTTTGGCTTCTTCAACCTTTtctctcccc > 1:495924/1‑231 (MQ=255)
ttCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGATAACAGCCGTGACAAAGGGATGCCAGCGGTTTTCAAAAAGAATATGATCGATCCCGGGTCGGCGCGGCGGTAAGGTCGCGCCTTTGAGCTTTTGCTTCTTCAACCATTTTATcaccc > 2:625362/1‑237 (MQ=255)
ttCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGTTGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGTGGGCGGGGAAGGTCGCGACTTTGAGTTTTGGCCTTTTCAACTCTTtcatccacc > 1:747434/1‑234 (MQ=255)
ttCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACCCTTTCATcacca > 2:392926/1‑238 (MQ=255)
ttCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGAGATCCCGGTTCGGCGCGGCGGTAAGGTCGAGACTTTGAGGTTTGGCTTCTTCAAct > 2:349108/1‑226 (MQ=255)
cACTCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGCGATTCCTAACCCAAACAGGCGTCCGGATGCTTCACACAGTGGCCAGGCTCAAAGCGCAATCAAACCGCTGAGACCAGCTGTGCAAAAGGGATGCCAGCGCTTTTCCAACAGAATCTGAGAGATCCCGGTCCGGCCCGGCGGTAAGGTGGAGACTTTGAGTTTTGCCTTGTTCAACTttttttgcaacaccacagac > 1:670906/1‑223 (MQ=255)
cACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGCCAAAGGGATGACAGCGTTTTTCAAACCGAATATGAGCGATCCCGGTTCGGCGCGGCGGAAAGGTCGCGACTTTGAGTTTTTGCTTCTTCAACCCTTTCCTCAACACCCaacaa > 1:7374/1‑235 (MQ=255)
cACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTTAACCCTTTCATCACCCCCCaagac > 2:470240/1‑235 (MQ=255)
cACCCCCCACCCGAAATTTCCTAATTTTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTTCTCCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCag < 1:866760/236‑1 (MQ=255)
cccGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTGGGCGCGCGGGGAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACCCTTTcaccacacaccaaagggt > 1:338418/1‑227 (MQ=255)
cgACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATc < 2:338418/239‑1 (MQ=255)
tGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGcaaccaaagtcccc > 2:894638/1‑231 (MQ=255)
gggAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATc < 2:588474/209‑1 (MQ=255)
gcaggTGATTCCGAACCCAAACCAGCGTCCGGTTGCTTCACTTAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCcacaca < 2:380384/234‑1 (MQ=255)
aaGTGATTCCCAACCCAAAATGGCGTCCGGGTGGTTCCCTCGGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGACCGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGa < 1:565314/238‑1 (MQ=255)
ttGATTCCTAACCCAAACAGGCGTCCGGTTGCTTCACTAAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGcc < 2:851190/228‑1 (MQ=255)
tCCTAACCCCAACAGGGGTCCGGTTGCTTCACCCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATCAGTACAGCTGTGCCAAAGGGATGCCAGCGTTTTTCAAACAGAATATGACCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTaa < 1:34677/239‑1 (MQ=255)
tCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCCCACAGACAAATTaa > 2:727475/1‑239 (MQ=255)
aacaaaccGTCCGGTTGCTTCCCTCAGGGGCCAGGCTAAAAGCCAAATTAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAg < 1:252003/232‑1 (MQ=255)
aaCATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCACCAAAAAGGCAACCAACGGCCCCACAGCAAAATTaaaaagttcagc > 2:615225/1‑231 (MQ=255)
aaCATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGCCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGGTATCCCCAGCAAAACGGCAACCAACGGCCAAACAGAAAAATAaaaaaatcaaac > 1:716115/1‑231 (MQ=255)
cactcctCCGGTTGCTTCACTCAGGGGCCAGGATAAAAGCCCAATCAAACCGATTAGTACAGCGGTGACAAAGGGATGCCAGCGTTTTGCAAACAGAATATGGGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTACAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCaa < 1:88880/233‑1 (MQ=255)
tgccgccggttctttaccccAGGGGCCAGGCTAAAAGCGCAATAAAACCGAGGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATa < 1:470240/220‑1 (MQ=255)
gtacgtttGCTTCCCCCAGGTGCCAGGTTAAAAGGCAAATCAAACCGATGAGTTCAGCGTTGACAAAGGGGTGCCAGCGTTTTGCAAACAGAAGATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATagag < 1:149167/233‑1 (MQ=255)
ctggTTGCATCACGTAGGGGCCAGGATAAAAGGGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTAAAAAAGAATATTGGCGATCCCGGTTCGTCGCGGCGGTAAGGTCGCGACTTTTAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAAGTAAAAGTCACAGCAATAGAGtt < 1:1021369/237‑1 (MQ=255)
ccGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGtt < 2:1008411/239‑1 (MQ=255)
ccGGTTGCGTCAAGTAGGGGCCATGCTAAAAGCGCAATCAAACCGAATATTACAGCTGTGACAAAGGGATGCCAGCGGTTTTCAAACAGAATATGAGGTATCCCGGTTCGGCGCGGCGGTAAGGGCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGtt < 2:670906/239‑1 (MQ=255)
ccGGTTCCTTCCCTTAGGGGCCAGGCTAAAAGCGCAATCAAACCGAGGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGGGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGtt < 1:615225/239‑1 (MQ=255)
cGGTTGCTCCACTCAGGGGCCAGGTTAAAAGCGCAATCAAACCGAAGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACTGAATAGGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGtt < 2:451536/238‑1 (MQ=255)
ttGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTAttt > 2:198968/1‑237 (MQ=255)
ttcTTCACTCGGGGGCCAGGTTAAAAGCGCAATTAAACCGAGGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCTGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGTGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGtt < 1:392926/237‑1 (MQ=255)
tGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGGTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGtt < 2:747434/239‑1 (MQ=255)
cTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCcaca < 2:874007/201‑1 (MQ=255)
ttCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAg < 1:198968/239‑1 (MQ=255)
tcgggggTCAGGCTAAAAGCGCAATCAAACCGATAGGTACAGCTTTGACAAAGGGATGCCGGCGTTTTTCAAACAGAATATGGGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTg < 1:231885/236‑1 (MQ=255)
acgggCCAGGCTAAAAGCGCAATCAAACCGATGATGACAGGTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATAGGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGGCTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCTCCCAGATCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTg < 2:397629/235‑1 (MQ=255)
aGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGtgctg < 2:7374/238‑1 (MQ=255)
aaaaGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGt < 2:131834/239‑1 (MQ=255)
cAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAAAGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTAAGTTACGTACTGTAGGGATGCAAGGTTTTAttt > 2:985751/1‑239 (MQ=255)
cAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAAACCTTTCCTCCCCCCCCAGAACGTTATCACCCGCAAAACGGCAACCAACGGCCACACAGCCCACTTAAAAGGCTCCGCAATAAAGCAATGTCCAATCCCTTACACCTGCAAGGTTTGAttt > 1:32671/1‑239 (MQ=255)
cAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGGAAGGGCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCCTCACCACCCAGAGCGTTATCACCCGCAAAACGGCAACCAACGACCACACAGACAAATTAAAAGTCTCGACAAAAAAGTTATGTTAAATACTATAGGGCCGCAAGGGTTTAttt > 1:104245/1‑239 (MQ=255)
acactgtggatctgagttgtgaaaaGGGGAGGCAGCGTTTTTCAAACTGTATTGGAGCGATCCCGGTTCGCGGCGGCGGACAGGTCGCGACGTTGACTTTTGGATACTTCAACCCTTTCAGCACCACCCAGAGCGTTAACGCCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAATTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCa < 1:625362/217‑1 (MQ=255)
ccGATGAGTACAGTTGTGACAAAGGGATGCCAGCGTTTATCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACt < 2:104245/239‑1 (MQ=255)
ccGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGATTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACt < 2:716115/239‑1 (MQ=255)
ttgtgttctgCTGTGCCAACGGGTTGCCAGGGTTTTTCAAACATAATATGGGCGAGCCCGGTTCGGCGCGGCGGTAAGTTCGCGCATTTGAGTTTTGGCTTCTCGAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGc < 1:280907/230‑1 (MQ=255)
aGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATcac > 1:439872/1‑111 (MQ=255)
aGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATcac < 2:439872/111‑1 (MQ=255)
aCAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGCCAAATTAAAAGGCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCa > 2:100501/1‑238 (MQ=255)
aCAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACAACTGGCATGTGGGGAACGCAt > 2:99671/1‑239 (MQ=255)
cgtGCCAGGGTTTTTCAAACGGAATATGCGCGTGCCCGGTCCGGCGGCGCGGTAAGGTCCCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCAACACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCg < 1:72142/235‑1 (MQ=255)
aTCCCGGTTCGGCGCGGCGGTAAGGTCGCGGCTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCATACAGACAAATTAAAAGTCTCAGCAATAGAGTTATg < 1:629867/143‑1 (MQ=255)
aTCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACTGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATg > 2:629867/1‑143 (MQ=255)
aTCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGCCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGGGAAAAGCGCGATCCa > 2:57369/1‑239 (MQ=255)
tCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAACCCGATCCAACTGCCg > 2:280275/1‑238 (MQ=255)
ggcgcggcgGTTAGGTCGCTACTTGTGGGTGTGGCCTCCTCCACCTTTTCCTCCCCCCCCAGAGCGTTACCACCAGCAAAACTGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGTATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATc < 2:74056/239‑1 (MQ=255)
ggcgcggcgGTAAGGTCGCGCCTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATc < 2:285519/239‑1 (MQ=255)
ggcgcggcgGTAAGGTCGCGACTTTGAGTTTTGGCCTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATc < 2:32671/239‑1 (MQ=255)
ggcccggcgTAAAGGTCGCGACTTTGATTTTTTGCTTCTTCAACTCTTTCATCACCACCCAGAGCTTTATCCCCAGCAAAACGGCAACCAACGGCCACAAAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATc < 1:727475/239‑1 (MQ=255)
cgcggctGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACGCTTTCATCACCAACCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGtt < 1:378230/128‑1 (MQ=255)
cgcggcgGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGtt > 2:378230/1‑128 (MQ=255)
cgcggcgGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACCCCTCACCATATAATGGAAAAGCCGGATCCAACTCCCGAtta > 2:346287/1‑236 (MQ=255)
cgcggcgGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAATCCCAGCAATAGAGTTATGTTCAGTACCGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATTTGGAGAACGCATACCCCCCCCCATCAACATAAAAGTGAAAACCGGGAAcccaacgcccaaaaa > 1:430008/1‑226 (MQ=255)
aaGGTCGCGATTTTGAGTTTTGGTCTCTTAAACCCTTTCATCCCCCCCCAGAGGTGTAACCCCAGAAAAACGGCAACCAACGGCCCCACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGGGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCAcc < 1:894638/239‑1 (MQ=255)
ccgcctcTTTGAGTTTTGGCTTTTTCAACTCTTTCATCACCACCCAGAGCGTTATCCCCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCcgcg < 1:57369/233‑1 (MQ=255)
cgcgagttttgtttttGGCTTTTTCAACCCCTTCAACCCCACCCAGAGCGTTATCCACAGGAAAACGGCAACCAACGGGCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTGCAGTACTGTAGTGCCGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCcgcg < 1:42630/226‑1 (MQ=255)
aCTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCa > 2:375727/1‑133 (MQ=255)
aCTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCa < 1:375727/133‑1 (MQ=255)
tGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCCCACCCCCCCGAAACCAGGCCCCgg > 1:548413/1‑239 (MQ=255)
cctcttcAACCCTTTCATCCCCACCCAGGGGGTTATAACCAACAAAACGGCAACCAACGGCCACACAGACAAAGTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGGAGTGCTGCAAGGTTTGATGTAAACCACGGGCAGGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTg < 1:346287/236‑1 (MQ=255)
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TTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGATGAGTACAGCTGTGACAAAGGGATGCCAGCGTTTTTCAAACAGAATATGAGCGATCCCGGTTCGGCGCGGCGGTAAGGTCGCGACTTTGAGTTTTGGCTTCTTCAACTCTTTCATCACCACCCAGAGCGTTATCACCAGCAAAACGGCAACCAACGGCCACACAGACAAATTAAAAGTCTCAGCAATAGAGTTATGTTCAGTACTGTAGTGCTGCAAGGTTTGATTTAAACCACTGGCATGTGGAGAACGCATCACCGCACTCATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTG > NC_000913/2084780‑2085241
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
