Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F27 I0 R1
|
83 |
86.1 |
2053078 |
89.1% |
1829292 |
215.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,507,166 |
T→C |
13.9% |
S57G (AGC→GGC) |
yhfT ← |
inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,507,166 | 0 | T | C | 13.9%
| 190.4
/ 4.2
| 96 | S57G (AGC→GGC) | yhfT | inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (43/37); new base C (5/10); total (48/48) |
| Fisher's exact test for biased strand distribution p-value = 1.70e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 |
GGCGAGCTTAATTCCCCCAGGCTACCTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAGATGGTTAATCAGCATCGGAATCGCGTGTTCGACGTGCTC > NC_000913/3506928‑3507393
|
ggCGAGCTTAATTCCCCCAGGCTACCTAATACAGCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCt < 2:324565/239‑1 (MQ=255)
cGAGCTTAATTCCCCCAGGCTACCTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGA‑AAAAGAGAACCCCACCGAGGCCACAAAA‑ACAAAGCCCa > 1:620437/1‑239 (MQ=255)
cTTAATTCCCCCAGGCTACCTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGCAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCCCCGAGGCCACAAAA‑CCAATGCTCAGAcc > 2:479931/1‑239 (MQ=255)
ttAATTCCCCCAGGGCACCTAATACACCCACCGGCAGCGCGGCCAGCAGCGGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGAcc < 1:593758/238‑1 (MQ=255)
cccAGGCTACCTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGCGGCCACAAAA‑CCAATGCTCCGACCAAAAGCGAt > 2:39311/1‑239 (MQ=255)
ggCTACCTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATACTCAGACCaaaaagcataac > 2:340628/1‑230 (MQ=255)
tACCTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTccc > 2:703844/1‑238 (MQ=255)
tACCTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATCCGTTGAGCAGCCCGGTTTTCAGGGG‑AAAAGAGATCCCCCCCGAGGCCACCAAA‑CCAATGATCAAACCaaaaaggaaaaaccc > 1:366094/1‑227 (MQ=255)
ccTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCCCAGACCAAAAGCGATACTCCCCg > 2:314130/1‑238 (MQ=255)
ccTAATACATCCACAGGCAGCGCGGTCAGCAGCTAGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGACGACAGAGTAACCATGCGTTGAGCGTCCCGGCATTCAGGGA‑AAAAGAGATCCCCACCCAGGCCACAAAC‑ACACAACTAAGAACAAAAGcagaaacaccccc > 1:20243/1‑227 (MQ=255)
tACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AACAGAGATCCCCACCGAGGCCCCAAAA‑CCACTGCTCAGCCCAAAAACGATAATCcccgccccgc > 2:57528/1‑239 (MQ=255)
accaccACCGGCAGCGGGGTCGCGCGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGGGGATATCGGTAGGAAGAAAGAGTAACCAGGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTcgcg < 1:39311/235‑1 (MQ=255)
aCATCCACCGGCAGGGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTcgcg < 2:366094/239‑1 (MQ=255)
ggcgcaggtgtgtgaaaagagacagcTTGTTTACCGGAAACAGGCAAGTAAGGGTCAACCCGGCCCAGAGAGCGCCAAGACCAAACGCCATCAGGCTTTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCAGGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATCCTCCCCGCCTcgcg < 1:635740/216‑1 (MQ=255)
cATCCCCCGGACGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACCCGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGa < 2:794267/239‑1 (MQ=255)
aTCCACCGGCAGCGCGGTCAGGCGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGAc < 2:952856/239‑1 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCCCAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCCCCCGCCgg > 2:782624/1‑239 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAgatgtctcttatacacacccaac > 2:910101/1‑216 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTccc < 2:889034/226‑1 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACgg > 2:836776/1‑239 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACgg < 2:799757/239‑1 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACgg > 2:6836/1‑239 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGAAACTCCCCGCCTCGCGACgg > 2:75570/1‑239 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGAAACTCCCCGCCTCGCGACgg > 2:52880/1‑239 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTAAGACCAAAAGCGCAACCACCCGCCTCGCGCCgg > 2:159926/1‑239 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCCCAGACCAAAAGCGATACTccc > 1:889034/1‑226 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGGTTTCAGGGC‑AAAAGAGATCCCCACCGAGGCCACCAAA‑CCAATGCTCAGACAAAAAGAGATACTCCCCCCCTcccgcggg > 2:606045/1‑235 (MQ=255)
ccACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGAAGCCGAGGAAATCGGAAGGAAGAAAGCGTAACCATGCGTTGCCAAGCCCGGGTTTCAGGGA‑AAAAAGTATCCCCCCCGAGGCCACCAAA‑CCAATGCCAAGACCAAAAACGATACACCCCGCCACGCGAAgg > 1:843513/1‑239 (MQ=255)
ccccGGCACGGCGGTAAACATCTGGTTTCCTGGCAACAGGCAAGTAAGGATCAACCCGCCCCAGATAGCGCAAAGACCAAACGCTATCAGGCTGTTTACCGCAAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGt < 1:479931/237‑1 (MQ=255)
cACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGAAAGGATCAACACGCCCCAGATAGCTCAAAGAACAAACGCCATCAGGCTGTTTCTCACCAGGACGCCCAGGATATCGGTAGGAGGAAAGAGTAACCTTGCGTTGAGAACACCGGTTTTCCGGGA‑CAAAAGGATGCCCACCCAGGCCACAAAA‑CCAATGATCAGACCCAAAAGGAAACTCCCCGCCCcgcgcaggg > 1:926591/1‑234 (MQ=255)
aCCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCAAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCCGGACGCCGCGGATATCGGTAGGAAGAAAGAGGAACACTGCGTTTACAAGCCCGGTTTTAAGGGTCAAAAGA‑ATCCCCACCGGGGCACCAAAA‑CCACAGCCCAAACCAAAAAGGATAACCCACCCCCCGTGACGGtt > 1:498667/1‑239 (MQ=255)
cgcgGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAg > 2:645934/1‑238 (MQ=255)
cgcgGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCAAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGGCCAGGCTCATATAg > 2:979584/1‑238 (MQ=255)
cgcgGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCAGAGGACATCGGAAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑ACAAGAAATCCACCCCGAGGCCCCAAAA‑CAAAAGCTCAGCCCAAAACCAAAACTCCCCGCCACGCGCCGGGTCaaaaag > 1:126762/1‑233 (MQ=255)
ttttagtgCAACGGGCAAGTAAGGCACAACCCCCCCCAGAAGGCCCCAAGCCCAAACGCCATCAGGCTTTTTAGCGCCAGGACGCCGGGGATATCGGTAGGAAGAAAGGTTAACCAGGCGTTGACGAGCCCGGTTTTCAGGGA‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAAGGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCgg < 1:683862/232‑1 (MQ=255)
ggCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCata > 2:635740/1‑213 (MQ=255)
aaCAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGCCGGTTCCTATAACCTTCAATCAGTTGCGGCAGGCTCgg > 2:623013/1‑239 (MQ=255)
aaCAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAACGGTAACCCCCCCCCCCGAACGGTTCAAATAGCCCTCAAAAAGTTGGGGCAGGagggg > 1:319676/1‑235 (MQ=255)
aCAGGGTAGTACGGTTCAACCCGCCCACGAAAGCGCCAAGACCAAACGCCATACGGCTTTTTATCGCCAGGACCCCGAGGATATGGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCggg < 1:979584/239‑1 (MQ=255)
aGGATCCACCCGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTAGCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCg < 2:532871/237‑1 (MQ=255)
gCCCCAGATAGCCCCAAGACCAAACGCAATCAGGCTGTTTAACGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCCCCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAg < 2:620437/239‑1 (MQ=255)
gcCAAGACCAAACGCCATCAGGCTTTTTATCGCCAGGACGCCGAGGATAGCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGa < 2:26202/238‑1 (MQ=255)
aGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCCTGAAAAACAGccgccggcggaggcg > 2:721016/1‑229 (MQ=255)
aGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATgcg > 2:744545/1‑238 (MQ=255)
aaCGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATTCCGGCCTGAAAAAAAGCCGCCGAGCGATGGGCCAG‑aac > 2:846981/1‑238 (MQ=255)
aaCGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGGTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGTAGCCGCCCTGAAAAAAATCCCCCGAGCGATGCGCCacacg > 2:335711/1‑235 (MQ=255)
taggcgttttACCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGACCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCa < 2:375110/232‑1 (MQ=255)
ctttttAGCGCCAGGCCCCCGAGGATTTCGGTGGAAAGAAAGTGGCACCAGTCGTTGAGCACCCCGGTTTTCAGGGT‑AAAAGAGATCCCCCCCGAGGCCAGAAAT‑CCAATGCTCAGACCAAAAGCGAGACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATa < 1:124233/234‑1 (MQ=255)
ttttATCCCCAGGCCCCCGAGGTAATCGTGAGGAAAAAAAGTTAACCATGCGGTGAGCCCCCAGGTTTTCAGGGA‑AAAAGAAACCCCCACCGGGGCCACAAAA‑CCAATGCCCAGACCAAAAGCGATCCTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCg < 1:112219/238‑1 (MQ=255)
tttATCGCCAGGACGCCGCGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCCATGCTCAGAACAAAAGCGATACTCCCCGCCCCGCGACGGTTCATATAGCCTTCAATCAGTTGAGGCAGGACAGGGCGGAGGCCGTCATGAAAAAAGACCCCCCAGGCATGCGCCAG‑AAGccgggacacacaccg > 1:808673/1‑225 (MQ=255)
tttATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGGTGCGCCAG‑AAGCGATGTCATACCCg > 2:112219/1‑238 (MQ=255)
cgcagcaagCCGGGGATCTCGGGAGGAAAAAAGGTTAACAGTGGTTTGAGCCGCCGGGTTTCCAGGAG‑AAAAGAGTCCCCCCCCGGGGCCCCAACC‑CCAATGCTCCGACCAAAAGCGATGCTCCCCGCGTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCa < 1:335711/231‑1 (MQ=255)
ccAGGGCGCCGGGGGTATCGGTAGGAAGAAAGAGTAACCAGGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCCCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCAc < 2:865265/239‑1 (MQ=255)
ggACGCCGAGGATATCGGTAGGACGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTAATATAGCCTTCAATAAGTTGCGGCAGGAGCCGGCGGGTGCCCGCCTGAAAAACAGCCGCCCGGCGAAGGCCCCG‑AAACGCGGGCATAACCGTTAggacagc > 1:797752/1‑233 (MQ=255)
ggACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCCGGATCGGGCGGATGCCGTCATGAAAAACAGCCTCCGAGCGATGCCCCCG‑AAGCGATGTCATACCCGTCAGGAACGca > 2:103819/1‑238 (MQ=255)
ggACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCCTGAAAAACAGCCGCCGAGCGATGCGCCCG‑AAGCGATGGCATACCCGCCAGGCACGc > 2:887047/1‑238 (MQ=255)
aCGCCGAGGATTTCGGTCGGAAGAAAGAGTAACCAGGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGcca < 2:319676/238‑1 (MQ=255)
ttatCGGGAGGAAAAAAGAGAAACCAGGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGACCCCCACCGAGTCCAAAAAC‑CCAATGCTCAGACCAAAAGCGAGACCCCCCGCCTCGGGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATaa < 1:782624/237‑1 (MQ=255)
atttgatggggAAGAAAGGTTACCCCGGCGTTGAGCACCGCGTTTTTGCGGGT‑AAAAGAGCACCCCACCGAGGCCACAAAC‑ACAATGCCCAAACCAAAAGCGATAGTCCCCGCCGCGCGACGGTTCATATAGCCTGCAATCAGTTGCGGCAGGGTCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATaa < 1:70626/229‑1 (MQ=255)
tctCGGTAGGAAGAAAAAGGCACCAGGGGTGGAACACCCCGGTTTTAAGGGA‑AAAAGGGGCCCCCCCCGAGGCCCAAAAC‑CCAATGCTACGACCAAAAGCGATACGCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAAt < 1:52880/236‑1 (MQ=255)
cGGTAGGAAGACAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAGGCGATACTCCCCGCCTcgcg > 1:848330/1‑115 (MQ=255)
cGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTcgcg < 2:848330/115‑1 (MQ=255)
ggTAGGAAGAAAGAGTAACCACGCGTTACGCAGCCCGTTTTTCAGGGT‑AAAAGAGAACCCCACCGAGGCCAAAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGaa < 2:498667/239‑1 (MQ=255)
aGGAAAAAAAGGTAACCAGGGGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGGGATCCCAACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAata < 2:991918/238‑1 (MQ=255)
gaaaaaaaggtcaCCATGCGTTGAACAGCCCGGTTTTCAGGGT‑AAAAGAAACCCCCACCGAGGCCAAAAAA‑CCAATGCTCAAACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAAtata < 2:843513/226‑1 (MQ=255)
agagaaagaGTCACCATGCTTTGAGCAGCCGGGTTTTCAGGGT‑AAAAGAAATCCCCACCGGGGCCACAAAA‑CCAATGCTCAGCCCAAAAGCGATACTCCCCGCCTCGCGACGGTCCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAAtata < 2:756915/236‑1 (MQ=255)
aaaaaaaaacaaaCCAGGCGTGTCGCACCCCGGTTGTCAGGGA‑AAAAGGAGCCCCCACCGAGGCCAAAAAC‑CCAAGTCTCAGACCAAAAGCGATACTCACCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAAtata < 1:845132/227‑1 (MQ=255)
aagaaagaGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGTTCCGGCGGATGCCGTCCTGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATTGCATACCCCTCAGGCACCCCCCCACGAAAAACTAAAaataaa > 1:522424/1‑237 (MQ=255)
aagaaagaGGAACCAGGCGTTGAGCACCCCGGTTTTAAGGGT‑AAAAGAGACCCCCACCGACGCCAAAAAA‑CCAATGCTCAGACCAAAAGCTATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATAc < 2:757121/238‑1 (MQ=255)
aagaaaagGTAACCATGGGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCCCCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGGGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATAc < 2:522424/238‑1 (MQ=255)
aaaaaaggtacaCCATGCGTTGACCACCCTGGTTTTCAGGGA‑AAAAGAGATCCCCCCCGAGG‑CACAAAACCCAATGCCCAGCCCAAAAGCGATCCTCCCCGCCCTGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATAc < 1:836776/227‑1 (MQ=255)
agaaaggGTAACCATGGCTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAAATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAAtata < 2:725492/236‑1 (MQ=255)
aaaaagaGTAACCAGGCGTTGAGCAGCCGGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATTCCCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAg < 2:126762/237‑1 (MQ=255)
aaCCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGACTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGAACGGGCGGATGCCGTCCTGAAAACCAGCCGCCGAGCGATGCGCCAG‑GAGGGGAGTCATAACCGTCCGGACCCCCACCCCGATaacccaaacaaacagaacccaaa > 1:42266/1‑217 (MQ=255)
aCCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCTGGCGGATGCCGTCATGAAAAACAGGCGCCCGGCGATGCGCCCG‑AAGCGATGTCATACCCGCCCGGCAACCCCCCACCCAAATCTGAATATACacaccccaaacc > 1:703296/1‑228 (MQ=255)
cGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGt < 2:583859/116‑1 (MQ=255)
cGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGt > 1:583859/1‑116 (MQ=255)
cGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGCTGTCATACCCGTCAGGCACGCCACCACGATAATCTGATTATACAGTTCCATAATCGGGc > 2:346717/1‑237 (MQ=255)
agcagcCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATTACAAACAGCCGACGAGCGATGCGCCGG‑AACCGATTGCATACCCGTTAGGCACCCCCCCAACATAACCTGAAAATAAATAACCAACGTCGTGCCtttttt > 1:109585/1‑237 (MQ=255)
agcagcCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGGTGCGCCAG‑AACCGATGTCATACCCGTCAAGCACGCCCCCCCGAAAATCCTAATATAAAGATCCATAGCCCGGCCtttttt > 1:833196/1‑237 (MQ=255)
acagcCCGTTTTTCAGGGT‑AAAAGATACCCCCCCCGAGGCCAAAAAA‑CCAATGCCCAAACCAAAGGGAATACCCCCCGCCTCGCGACGGTTCAAATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTAt < 1:703844/237‑1 (MQ=255)
gcCCGTTTTTAAGGGT‑AAAAGGGCTCCCCCCCGAGGCCCCAAAA‑CCAATGCCCAGCCCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCa < 2:402500/239‑1 (MQ=255)
ccctgtttttggggat‑AAAAGAGCTCCCCCCAGGGCCCAAAAAA‑CAAAGGCTCAGCCCAAAAGTAGGCCCCCCCGCCGGGCGAAGGTTCAAATGACCTTCAATCAGGTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAAGCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCa < 1:741393/224‑1 (MQ=255)
ccccGTTTTTCAGGGT‑AAAAGAGATCCCCCCCGAGGCCAAAAAA‑CCAAAGCTCAGACCAAAAGCGATACCCCCCCGCGCGCGACGGTTCATATAGCCTTCAATCAGTGGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCa < 1:744545/238‑1 (MQ=255)
cccTGTTATCAGGAG‑AAAACAGTTCCCCACCGGGGCCACAAAA‑CCAATGCTCAACCCAAACGCGATTCTCCCCGCCTCGCGACGGTACATAAAGCCTTCAATCAGTTGCGGCAGGAGCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAg < 1:340628/239‑1 (MQ=255)
ccGGTTTGCAGGGT‑AAAAGTGATCCCCACCGAGTCCACAAAA‑CCAATGCCCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAGa < 2:808673/239‑1 (MQ=255)
ccGGTTTGCAGGGA‑AAAAGATAGCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAGa < 2:43432/239‑1 (MQ=255)
ttttCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACCCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAAc < 2:862258/136‑1 (MQ=255)
aggtaaaaaGGGATCCCCCGCGAGCTCACAAAA‑CCAAGGCACAGACCAAAGGCGATACTCCCCGTCTCGGGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAGATGGTTAATc < 1:75570/234‑1 (MQ=255)
agaCCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCAc < 2:383366/167‑1 (MQ=255)
aacccccACCGAGCCCACAAAA‑CCAAGGGCAAGACCAAAAGGGATTCTCCCCGCCTCGCGACGGTTCATATAGCCTGCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAGATGGTTAATCAGCATCGGa < 2:42266/234‑1 (MQ=255)
aTCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGCGCGATGCGCCAG‑AAGCGATGTAATACCCGTCAGGCACGCCCCCACGATAATCTGAAAATACAGAACCATAGTCAGGCCTTTTTTTTCACTTGGTTAAACAGCACCGGaaac > 1:291637/1‑237 (MQ=255)
aTCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACAAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGACAGGCTCGGGCGGATGCCGTCATGAAAAACAGCCGGCGACCGATGCGCCAG‑CAGCGATGTCAAACCCAGCCGGCACGCCCACACGAAAATCTGGATATACAGATCCATAGCCATGCCTTTTATTTAAGATGGATAATCAgaagagggaaa > 1:665041/1‑229 (MQ=255)
ccccACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGGGCGCGGCGCCAG‑AAGCGAGGTCATACCCGTCAGGCACGCCACCACGATAATCCGAATATACACGCCACTACCCGCGCCTTTTATTTACGATGGTTaaaaacaaccggaaaaga > 1:391473/1‑223 (MQ=255)
ccGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGCTCGCGCGGATGCCGTCATGAAAAACACCCGCCGATCGATGCGCCAGCAAGCATTGCCA‑CCACGTCAGGCCCGCCCCCCCGATAACCTGAATATAACGATCACCAGACTGTCCTTTCATTTCAAATGGTTAAttcaacacggaaacacggggt > 1:260430/1‑219 (MQ=255)
acaAAA‑CCAATGCCCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAGATGGTTAATCAGCATCGGAATCGCGTGTTCGACGTg < 2:833196/238‑1 (MQ=255)
aaaa‑CCAATGCCCAGACCAAAAGCGATACCCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGGCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAGATGGTTAATCAGCATCGGAATCGCGTGTTCGACGTGCTc < 2:703296/239‑1 (MQ=255)
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GGCGAGCTTAATTCCCCCAGGCTACCTAATACATCCACCGGCAGCGCGGTCAGCAGCTGGTTTACTGGCAACAGGCAAGTAAGGATCAACACGCCCCAGATAGCGCCAAGACCAAACGCCATCAGGCTGTTTATCGCCAGGACGCCGAGGATATCGGTAGGAAGAAAGAGTAACCATGCGTTGAGCAGCCCGGTTTTCAGGGT‑AAAAGAGATCCCCACCGAGGCCACAAAA‑CCAATGCTCAGACCAAAAGCGATACTCCCCGCCTCGCGACGGTTCATATAGCCTTCAATCAGTTGCGGCAGGATCGGGCGGATGCCGTCATGAAAAACAGCCGCCGAGCGATGCGCCAG‑AAGCGATGTCATACCCGTCAGGCACGCCACCACGATAATCTGAATATACAGATCCATAGTCGTGCCTTTTATTTCAGATGGTTAATCAGCATCGGAATCGCGTGTTCGACGTGCTC > NC_000913/3506928‑3507393
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
