Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F27 I0 R1 83 86.1 2053078 89.1% 1829292 215.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,530,175 T→A 12.4% I24F (ATC→TTC)  sgcC ← putative PTS system EIIC permease component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,530,1750TA12.4% 244.6 / 3.0 88I24F (ATC→TTC) sgcCputative PTS system EIIC permease component
Reads supporting (aligned to +/- strand):  ref base T (51/24);  new base A (2/10);  total (53/35)
Fisher's exact test for biased strand distribution p-value = 1.11e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAATAAGGTCCATACCGTTACAGTTAAGAGGGAT  >  NC_000913/4529937‑4530408
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                           
ttGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGCCAAAACCAATCCCAACCGTTACCCCTGCCTTAATAGCCTGCAGCCAGGGGAT‑GCGG‑AAGAt                                                                                                                                                                                                                                             >  2:812410/1‑239 (MQ=255)
 tGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGTTa                                                                                                                                                                                                                                            >  2:240757/1‑239 (MQ=255)
        aaaaaTAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCATAGACATGCAGGTCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGCTCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑ACGG‑AAGCTAAGGCCa                                                                                                                                                                                                                                      >  2:774049/1‑238 (MQ=255)
        aaaaaTAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATAACGATCACCAGTCCCCAACCGCACAAACCAATCCCAACCGTTCACCCAGCCTTAATCCGCCGAACCCAGGGGATGGCGA‑AAGAAAAgcaa                                                                                                                                                                                                                                       >  1:81315/1‑235 (MQ=255)
           aagatcTGGGATAATGTTGGCGCCAAGGGGTGGCGAATAACCAACGCCGGAGGCAGGGCCCGCACCAACGGCAAAGACATGCAGGGTAAGGCCGAAACGCTCAATCAACACTTTGATAGGGGGACTGAGGCTTTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAAGCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCa                                                                                                                                                                                                                                  <  1:812556/234‑1 (MQ=255)
           aaTGACTGGGATAATCATGGCGCCAATGGCTTTCGCATAACCAAGGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCCCTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCa                                                                                                                                                                                                                                  <  2:18000/239‑1 (MQ=255)
             ataagggaaaggccagggCGCCAAGGGCTGTCCCATAACCACCGGCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCCCGTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACg                                                                                                                                                                                                                                <  1:669267/223‑1 (MQ=255)
              accggggATAATCATGGGCCCAATGGCTGACCCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGGCAAAGGCATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACg                                                                                                                                                                                                                                <  1:420537/234‑1 (MQ=255)
               aCTGGGATAATCAGGGCACCAATGGCTGGCGCAGAACCAACGCCGGAGGCAGGGCCTGCGCCAGCGTCAAAGACAGGCAGGGCTAGGCCGAAACGCTCAATCATCGCTGTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCTCCAGTCCCATACCGACATATCCAATCCCAACCGTTTCCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGAt                                                                                                                                                                                                                              <  2:300557/239‑1 (MQ=255)
                  gggATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGAATGAGGCTGTCGATCGCCCTTACGATACCCAGTCCCATCCCGACAAAACCAACCCCAACCGTTACCCCAGCCTTATTCGCCTCCCACACGGGGTA‑TCGG‑AAGATAAGGcacaaccacaacaa                                                                                                                                                                                                                           >  1:192511/1‑226 (MQ=255)
                    gATAACCATGGCCCCAATGCGTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGGCAAAGACATGCAGGTGTAGGCCGAAACGCTCAAGCAGCCCTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCatg                                                                                                                                                                                                                          <  1:293301/238‑1 (MQ=255)
                       aaTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCACTCACGATCCtg‑atga                                                                                                                                                                                                                     >  2:420537/1‑239 (MQ=255)
                         tCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATa                                                                                                                                                                                                                   <  2:72296/239‑1 (MQ=255)
                             ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCCTGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCCCGATCATG‑TTGATAggg                                                                                                                                                                                                                >  2:783113/1‑238 (MQ=255)
                             ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCCCGATCATG‑CTGATAggg                                                                                                                                                                                                                >  2:345936/1‑238 (MQ=255)
                             ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCCTG‑ATGATAggg                                                                                                                                                                                                                >  2:1011026/1‑238 (MQ=255)
                              gcgcCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAgg                                                                                                                                                                                                                                         >  2:789968/1‑213 (MQ=255)
                                   aagggCTGGCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTAAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGaaaa                                                                                                                                                                                                         <  2:183175/236‑1 (MQ=255)
                                   aaTGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCCCTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCCATCCCATACCGCCAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGTTAAGGCCAATCACGATCAtg‑atga                                                                                                                                                                                                                     >  2:669267/1‑227 (MQ=255)
                                         cgtccatcaaCCCACCCGGGGGGCGGGGCCTGCCCCAAGGCAAAAGGCATGGAGGGTTGGGCCAAACCCCCCAATCACCCTTTTGATAGGGGGACTGGGGTTGCCAACCGCCATGCCGATCCCCAGCCCAATCCCGAAAAAACCAATCCAAACCTTTCCCCCTGCCTTAACCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑c                                                                                                                                                                                                  <  1:977775/231‑1 (MQ=255)
                                                 aaCCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCcaga                                                                                                                                                                                          >  2:769775/1‑239 (MQ=255)
                                                       cGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTTCCGCCAGGGGAT‑GCGG‑AAGATAAGGCCAACCACGATCATA‑ATGATAGGGCCGAAACCGGTA‑CCCCCGGAAGACaag                                                                                                                                                                                    >  1:426738/1‑237 (MQ=255)
                                                             aGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCTATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCACCCAGGGGAG‑ACGG‑CAGTAAAGACCAAACACGATCATG‑GTTATAGGGCCGAAACCAGTA‑CCGCCAGAAGACAgaggataa                                                                                                                                                                              >  1:877247/1‑232 (MQ=255)
                                                                       tGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCCCGATCATG‑ATGATAGGGACGAAAACGGGA‑CCGCCGAGAGACAGGATGTAATCAAACATaa                                                                                                                                                                    >  2:886580/1‑239 (MQ=255)
                                                                          cccAACGTAAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCAATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTCCCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGc                                                                                                                                                                 <  2:532611/238‑1 (MQ=255)
                                                                             aaCGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCCCGATCATG‑TTGCTAGGGACGAAAACGGAA‑CCGCCGGGAGACAGGAGGTAAACAAAAAAAAAGccc                                                                                                                                                               >  1:778162/1‑237 (MQ=255)
                                                                             aaCGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATAACGATCATG‑ATGTTAGGGACGAAAACGGTA‑CCGCCGGGTGACAGGATGTAATAAAACATAATGcct                                                                                                                                                               >  2:890005/1‑238 (MQ=255)
                                                                                    aaGACATGAGGGGCTAGGCCGAAAGGCTCAATCATCACTTTGATAGGGGGACGGAGGCTGTCGATCGCAATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTAt                                                                                                                                                       <  2:767379/239‑1 (MQ=255)
                                                                                    aaGACAGGCAGGGCTAGGCCGAACCGCTAAACCATCCCTGTGATAGGGGGACTGAGGCTGCCGATCGCCATGACGATCACCAGTCCCATACCGACAAACCCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTAt                                                                                                                                                       <  2:426738/239‑1 (MQ=255)
                                                                                           gCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCAc                                                                                                                                                                                                                                 >  2:122424/1‑160 (MQ=255)
                                                                                           gCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCAc                                                                                                                                                                                                                                 <  1:122424/160‑1 (MQ=255)
                                                                                                 cTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATCAGGCCAATCCCGATCATG‑TGGATAGGGCCGAAAACGGTA‑CCCCCGCGAGACAGGAGGTAATCAAACATAATGCCACCTTTTATTGTGTTaaacag                                                                                                                                           >  1:198043/1‑234 (MQ=255)
                                                                                                    ggCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGAAATCAAAAATAAAGCCACCCTTTATTGAGTTaaaaaag                                                                                                                                          >  1:471078/1‑231 (MQ=255)
                                                                                                    ggCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATC‑ATGATAGGGACGAAAACGGAA‑CCGCCGAGAGCAAGGATGTAATCAAACATAATACCTCCTTTTATTCAGTTAACAAAGCCt                                                                                                                                       >  2:345946/1‑239 (MQ=255)
                                                                                                         aaaCGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ACGATAGGGACGAAAACGGTA‑CCGCCGAGCGACAGGATGAAATCAAACATAAAGCCTCCCTTTATTGAGTTAACAGAGGCttagtt                                                                                                                                  >  1:716353/1‑235 (MQ=255)
                                                                                                         aaaCGCTCAATCATCACTTTGATAGCGGGACTGCGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGAAGCCAGGGCAT‑GCGG‑AAGATAAGGCCAATACTGATCATG‑CTGCTAGGGCAGAAAACGGTT‑ACGCCGAGGGACAGGATGTAATCAACACTAATGCCTCCTTTTATTGAGTGAACAGACACTTAAtt                                                                                                                                  >  1:237467/1‑239 (MQ=255)
                                                                                                           ccGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGACCCCCAGTCCCATACCGAAAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ACGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATttg                                                                                                                                <  2:716353/238‑1 (MQ=255)
                                                                                                                       caCTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAAcgc                                                                                                                    >  2:281521/1‑239 (MQ=255)
                                                                                                                             gATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAAt                                                                                                                                                                                                                                    <  2:760311/123‑1 (MQ=255)
                                                                                                                             gATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAAt                                                                                                                                                                                                                                    >  1:760311/1‑123 (MQ=255)
                                                                                                                                  ggggACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAAAGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTg                                                                                                          >  2:97156/1‑238 (MQ=255)
                                                                                                                                   ggaaCTGAGGCTTTCGATCGCAAGAACGATCCCCAGTCCCATACCGACAAACCCAATCCCAACCGTTCCCCTTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGa                                                                                                         <  2:377599/235‑1 (MQ=255)
                                                                                                                                    ggACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACa                                                                                                                                             >  2:57142/1‑201 (MQ=255)
                                                                                                                                    ggACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGAt                                                                                                        >  2:861258/1‑238 (MQ=255)
                                                                                                                                    ggACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGCAATCAAACATAATGACTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAATGCGTCGTCGTTGAt                                                                                                        >  2:702973/1‑238 (MQ=255)
                                                                                                                                      aCTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGAA‑CCGCCGAGAGACAGGATGTAATCAACCATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGCTTTGTTGTTTTAACGGCTCGCCGTTGATc                                                                                                       >  2:485688/1‑237 (MQ=255)
                                                                                                                                        tGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCCTTTATTGAGTTAAAAGAGCCTTGATTTTTTGTTTTAACGCGGCGTCGTTGATACCtt                                                                                                   >  1:377599/1‑238 (MQ=255)
                                                                                                                                          aGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGAAT‑GCGG‑AAAATAAGGCCAATCACGATCAGG‑TGGAAAGGGACGAAAAGGGTA‑CCGCGGCGACACAGACTGTAATCAAACAAAATGCCCCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTTTTTTAACGCGTCGCCGTTAATCCCtgtg                                                                                                 >  1:269325/1‑239 (MQ=255)
                                                                                                                                            gCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGAt                                                                                                                                                                                                                              <  1:262637/114‑1 (MQ=255)
                                                                                                                                            gCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGAt                                                                                                                                                                                                                              >  2:262637/1‑114 (MQ=255)
                                                                                                                                            gCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAAAAGAGCCTTGATTTGTTGTTTTAAAGCCTCTTCGTTTATCCCtgtggc                                                                                               >  1:640630/1‑237 (MQ=255)
                                                                                                                                               gTCGATCGCCATGACGATCACCAGTCCCATACCGGCAAAACCAATCCCAACCTTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATAATG‑ATGATAGGGACGAAAACGGTA‑CCGCCgagaga                                                                                                                                                                                        <  2:738330/147‑1 (MQ=255)
                                                                                                                                               gTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCgagaga                                                                                                                                                                                        >  1:738330/1‑147 (MQ=255)
                                                                                                                                                          tGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACAATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGGGACCGGACGTAAAAAAACATAATGCATCCTTTTATTGAGTTAAAAGAGCCTTGATTTGGTGTTTTAACGCGTAGTGGTTGATCCCTGTGAGCAGGGGGGGGCCAt                                                                                 >  1:451233/1‑239 (MQ=255)
                                                                                                                                                           gccgccccccACTCCCAGACCGACAAAACCCAGCCCACACGTCCCCCCTGCCTTGCTCGCCGGCAGCCGGGGGAT‑GGGG‑AAGAAAAGGCTAATCACGTGCATG‑AGTCTAGTAACGAAACCGGGA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCAtt                                                                                <  1:1001681/231‑1 (MQ=255)
                                                                                                                                                           aaaagggcgttgTCCCATGCCGAAAAACACATGCCCCAGCGTCGCCCACGCCATAATCCTCTGAAACAAGGGGGA‑GCTG‑ACGACACGGCCAACCACGAGCATG‑ATGGTAGGGACGAAGAGGGGA‑CCGGAGAGAGACAGGATGTAATCAAACATAATGCCGCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCAtt                                                                                <  1:201770/228‑1 (MQ=255)
                                                                                                                                                                 ccccAGTCCCATCCCGAAAAACCCAACCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAggg                                                                                          <  2:979805/221‑1 (MQ=255)
                                                                                                                                                                      gTCCCATCCCGAAAAAACCAATCCCAACCGTTACCCCTCTCTTAATCGCCTGCGGCCCGGGGAT‑GGGG‑AAGATAAGGCCAATCCCGATAATG‑ATGGTAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGa                                                                     <  2:269325/239‑1 (MQ=255)
                                                                                                                                                                      gTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACTCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGa                                                                     >  2:1017982/1‑239 (MQ=255)
                                                                                                                                                                      gTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAGGCGTAGGGa                                                                     >  2:672221/1‑239 (MQ=255)
                                                                                                                                                                         cgtctccaaaaaagCCGATCCCAACCTGTACCCGTGCTAGAAGCGCCTAGGGTCAGGGTAT‑GCGG‑AAGAAAAGGCAAATCACGTTCATG‑ATTATAGGGAGAAAAACGGTC‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGAGTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGACGc                                                                  <  1:801701/229‑1 (MQ=255)
                                                                                                                                                                          cATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGcc                                                                 >  2:687319/1‑239 (MQ=255)
                                                                                                                                                                           aTACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGCCGTCGTTGTCCCCTGTGGGCAGGGTGGCGCCATTacttgcccttaaaaac                                                                >  1:979805/1‑224 (MQ=255)
                                                                                                                                                                               ccaaaaaccccacccaccccGTGACCCCGTCCTTAATCGCCTGCAGCCAGGGGAT‑GCAG‑AAGAAAATGTCAATCAGGATCATG‑ATGATAGGGACGAAACGGGTC‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAAt                                                            <  1:769775/221‑1 (MQ=255)
                                                                                                                                                                               caaaaaaaCCAATCCAAACCGTTCCCCCTGCCTTAACCCCCTGCAGCCGGGGAAT‑GGGA‑AATATAAGGCAAATCAAGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAAt                                                            <  2:876335/235‑1 (MQ=255)
                                                                                                                                                                                 aCAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTAtt                                                                                                                                                      >  2:958426/1‑147 (MQ=255)
                                                                                                                                                                                 aCAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTTTTTTTTTAACGCGTCGTGGTTTTTCCCTGTGAGCAGGGCGGGGCCATTAAGCGTAGGGTGGCCGAAAACa                                                          >  1:971229/1‑239 (MQ=255)
                                                                                                                                                                                 aCAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATc                                                           >  2:369621/1‑238 (MQ=255)
                                                                                                                                                                                 aCAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATc                                                           >  2:207851/1‑238 (MQ=255)
                                                                                                                                                                                 aCAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGCCGGCGCCATTAAGCGTAggg                                                                      >  2:201770/1‑227 (MQ=255)
                                                                                                                                                                                         aaTCCCAACCGTTACCCCGGCCTAAAGCCCCGGCAGCCAGGGGAT‑GCGA‑AAGAAAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGt                                                  <  2:442391/239‑1 (MQ=255)
                                                                                                                                                                                                ccctttcccccTGTCTTGACCGTCGGAAGCCAGGGAAG‑GCGG‑AAAGAAAGGACAACCGCGATCAAG‑ATAAAAGGAACGAAACGGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATg                                           <  1:281521/232‑1 (MQ=255)
                                                                                                                                                                                                aCCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGCTTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGGAGGGATGCCGTAATAACTGTTGGGTCGCATg                                           >  1:24873/1‑239 (MQ=255)
                                                                                                                                                                                                  ctttcccctTGCGTTATTCGCGTG‑AGCCCGGGGAT‑GGGGAAAGCAAAGGCCAATCAGGATCATG‑ATTAGGGGGACGAAACCGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGa                                         <  1:369621/234‑1 (MQ=255)
                                                                                                                                                                                                     tACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTGGCGTGGAGGt                                      >  2:267487/1‑239 (MQ=255)
                                                                                                                                                                                                      aCCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGtt                                     >  2:912644/1‑239 (MQ=255)
                                                                                                                                                                                                           tGCCTAAACCGCCTGCAGCCGGGGGAG‑GGGG‑AAGAAAAGGCAAATCACGATCAGG‑ATGATAGGGACGAAACCGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAAt                                <  2:198043/239‑1 (MQ=255)
                                                                                                                                                                                                           ctccTTAAGCGCTGGGAGCGGGGGGAT‑GCGG‑AAAAAAAGGCAAACCAGGAT‑ATGTATGAAAGGGACAAAAAGGGTA‑CCGACGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAAt                                <  1:861258/237‑1 (MQ=255)
                                                                                                                                                                                                            gCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGTCGACGCCATTAAGCGTAGGGATGCCGCAATCCCTGTTGGTTCGCGTGGGGGTTACaaaa                               >  1:675648/1‑237 (MQ=255)
                                                                                                                                                                                                            gCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGGGGTTACAATa                               >  2:751203/1‑239 (MQ=255)
                                                                                                                                                                                                            gCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTAATCCCTGTAAGCAGGGCGGCGCCATTAAGCGTAGGGATGCGGAAATCCCTGTTGGTTCCCATGGGGGtaaaaaaa                               >  1:827538/1‑232 (MQ=255)
                                                                                                                                                                                                            gCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAACCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAATa                               >  2:47482/1‑239 (MQ=255)
                                                                                                                                                                                                                      cctccggCCTGGGGAT‑GGGG‑AAAAAAAGGCCAAACACGAACATT‑ATGGTAGGGACGAAAACGCTA‑CCGCCGAGAGACAGGATGTAAAAAAACATAATGCCTCCTTTTATTGAGTCAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAATAAGGTCCATAc                     <  1:1017982/233‑1 (MQ=255)
                                                                                                                                                                                                                       ctgaagcagggggAG‑GCGG‑AAGATAAGGCCAATCGCGATAATG‑TTGATAGGGACAAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAATAAGGTCCATAc                     <  2:192511/229‑1 (MQ=255)
                                                                                                                                                                                                                       cTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAGCAGAGCCTTGATTTGGTGTTTTAGCGCGTCGTCGTTGATCCCTGTGAGCAGGGGGGCGCCATTAAGCGTAGGGATGCCGTAATCCCTTTTGGTTCGCATGGGGGTTAAAAAAAAGACCATAcc                    >  1:270376/1‑239 (MQ=255)
                                                                                                                                                                                                                                            aataTAAGGACAATCCCGATCATG‑ATGAGAGGGAC‑AAAACGGGACCCGCCTGGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGATTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAATAAGGTCCATACCGTTACAGTTAAGAGGGAt  <  2:451233/235‑1 (MQ=255)
                                                                                                                                                                                                                                            aaGAAAAGGCCAATCCCGATAAGG‑ATAAAGGGGAAGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAATAAGGTCCATACCGTTACAGTTAAGAGGGAt  <  2:471078/238‑1 (MQ=255)
                                                                                                                                                                                                                                              gATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGa                                                                                                         >  1:336047/1‑133 (MQ=255)
                                                                                                                                                                                                                                              gATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGa                                                                                                         <  2:336047/133‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                           
TTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTGCCTTAATCGCCTGCAGCCAGGGGAT‑GCGG‑AAGATAAGGCCAATCACGATCATG‑ATGATAGGGACGAAAACGGTA‑CCGCCGAGAGACAGGATGTAATCAAACATAATGCCTCCTTTTATTGAGTTAACAGAGCCTTGATTTGTTGTTTTAACGCGTCGTCGTTGATCCCTGTGAGCAGGGCGGCGCCATTAAGCGTAGGGATGCCGTAATCACTGTTGGTTCGCATGGAGGTTACAATAAGGTCCATACCGTTACAGTTAAGAGGGAT  >  NC_000913/4529937‑4530408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A