Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 909,181 A→G 14.7% A38A (GCT→GCC)  ltaE ← L‑allo‑threonine aldolase, PLP‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913909,1810AG14.7% 217.9 / 2.5 95A38A (GCT→GCC) ltaEL‑allo‑threonine aldolase, PLP‑dependent
Reads supporting (aligned to +/- strand):  ref base A (39/38);  new base G (3/13);  total (44/51)
Fisher's exact test for biased strand distribution p-value = 2.65e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ACTTTATCCAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCGCAGCATATACAGGCTGAA  >  NC_000913/908948‑909414
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                              
ttttttcgacggcgcaGCGTCCCGGGGGCAGCCGGGTTGATGGTTTGCGGTTGAATGCGCCCCGGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCAtt                                                                                                                                                                                                                                           <  2:236414/224‑1 (MQ=255)
tcttttccccgcgtgaggcgcccGGCGGCAGCGGTCTCTGGGGGTTGGGGTTGAATCCTCCCCAGCACCGCCGCGCCACCGGCTTCCAACAGAAAGGTATGCGCGGT‑CTGACCGACAATATACTCTTCGGCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCAtt                                                                                                                                                                                                                                           <  1:532875/218‑1 (MQ=255)
                gctcgccgccgccACCCGCTTTTTTGGGTTGCGGTTGAATCCCCCCCCGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGgtcgtc                                                                                                                                                                                                                           <  2:14228/234‑1 (MQ=255)
                   tGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGCGCCGGTAGGCAGAAAAATGGAGGGCTCTTTACCGGAAAGCCCTGCTACGGTGGCCTCCA‑GGGCACAAACGGGA‑GGggcgtggccg                                                                                                                                                                                                                       >  2:329824/1‑234 (MQ=255)
                        tCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGACGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACg                                                                                                                                                                                                                                       >  1:178079/1‑219 (MQ=255)
                          ggcgcccgggttttggggttggggttgAATACGCCCCAGCACCGCCGCCCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACGCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAAcgt                                                                                                                                                                                                                <  2:473595/224‑1 (MQ=255)
                                         gggTGGCGGTTGAATCCTGCCCGCCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATCCTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCAGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCgggg                                                                                                                                                                                                <  1:670383/239‑1 (MQ=255)
                                             tGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCCCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGGCGTCCCCAA‑CCGGggcgg                                                                                                                                                                                             >  2:546027/1‑238 (MQ=255)
                                             tGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTCGGCCTGAGGGCCGGACGGCAGAAAAATGCAGCCTCCTTTACCGGAAAGCTCTGGCGGGTGGGCCTGCC‑GAGCTGTAACGGCA‑GGGGTACATCCGCAACCGGCGTCCCCAACCCGGggcg                                                                                                                                                                                              >  2:1037192/1‑238 (MQ=255)
                                             tGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGGGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GGGCCTTAACGGCA‑GGGCCGCTCCCGGAAACGCCGGCCCCAA‑cccctgcgct                                                                                                                                                                                            >  1:405017/1‑231 (MQ=255)
                                                  ttgactcctccccgccACCCCCGCGCCCCCGGTTTCAAACAGATAGTTAGGCGCGGC‑CTGACCGAAAATATTCTCTTCGCCGCGTTCGCAGTGACTGAGGAGAGCGCCCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑Ccatca                                                                                                                                                                                      <  2:1086382/224‑1 (MQ=255)
                                                   taaaactcccccccccccgccgCGCCCCGGGCTTCAAACAGATAGTTAGGCGCGGC‑CTGACCGACAATATCCTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGCCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑Ccatca                                                                                                                                                                                      <  2:743839/222‑1 (MQ=255)
                                                    gAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGGAAGCTCTGCTGCGGAGTCCTGCA‑GAGCCTTACCGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑ACGGGGGGG‑Gcaacac                                                                                                                                                                                     >  2:293603/1‑237 (MQ=255)
                                                          tGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCg                                                                                                                                                                              >  1:824622/1‑239 (MQ=255)
                                                            cccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTCGGCAGAAAAATGGCGGCTTCTTTACCGGCAAGCTCTGCTGCGTAGTCCTGCC‑GAGCATTAACGGTA‑AGGTCGGCTCCGTAAAAGCCGTCCCCAA‑CCCGGGGGG‑CCCCCATCCCTCCggg                                                                                                                                                                            >  2:545167/1‑237 (MQ=255)
                                                            cccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGCAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑ACATCATCGCTTCGAg                                                                                                                                                                            >  1:808601/1‑239 (MQ=255)
                                                            cccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCCGGGCGG‑CCATCATCGCTTCGa                                                                                                                                                                             >  1:561344/1‑238 (MQ=255)
                                                            cccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGGCCTGCA‑GGGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCCTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCgg                                                                                                                                                                             >  1:1072357/1‑237 (MQ=255)
                                                            cccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGGAGTCCTGCC‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGACGTCCCACA‑CCGGGGCGG‑CCATCCACGCTTCgg                                                                                                                                                                             >  2:486601/1‑237 (MQ=255)
                                                                gtcaggccgcGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATACTCGCTTCGGGCATg                                                                                                                                                                        >  1:965238/6‑239 (MQ=255)
                                                                 cACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCC‑GAGCATTAACGGTA‑GGGGCGTCCCCGTACACCGCGTCCCCAA‑ACGGGGGGGCCCACCATC‑CTTCGAGCATgg                                                                                                                                                                       >  2:1029828/1‑239 (MQ=255)
                                                                 accccccccgcCACCGGCTTCAAACAGATAGTTATGCGGGGC‑CTGACCGACAATATACTCCTCGCCGGGTTCGCAGTGACGGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATgg                                                                                                                                                                       <  2:169669/231‑1 (MQ=255)
                                                                      ccgcGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCCTGGcccg                                                                                                                                                                   >  1:1043370/1‑238 (MQ=255)
                                                                      ccgcGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACAAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGGAAGCCCTGCTGCGTAGTCCTGCA‑GAGCCTTAACCGTA‑AGGTGTTCTCCGGAAAAGTCGTCCCCCA‑CCCGGGGGG‑CCCACAACGCCTAGAGAATGgggccg                                                                                                                                                                  >  2:61157/1‑237 (MQ=255)
                                                                           ccACCGGCTTCAAACAGATTGTTATGCGCGGC‑CTGCCCGACAATATCCCCTGCGCCGCGTTCGCAGTGACTGAGCAGAGCGTCCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCGCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTgg                                                                                                                                                             <  1:188227/239‑1 (MQ=255)
                                                                           ccACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGGAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTg                                                                                                                                                              >  1:991487/1‑238 (MQ=255)
                                                                                 gCTTCAAACAGGTAGGTAGTCGGGGC‑CTGACCGACAAGTTCCTCTTCGCCGCGTTCGCAGGGACTGGGCAGGGCGGCCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGt                                                                                                                                                       <  2:395483/239‑1 (MQ=255)
                                                                                  cTTCAAACAGATAGTTATGCGGGGC‑CTGACCGACAATATTCTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGt                                                                                                                                                       <  1:955050/238‑1 (MQ=255)
                                                                                  cTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGt                                                                                                                                                       <  1:1029828/238‑1 (MQ=255)
                                                                                  cTTCAAACAGATAGTTAGGGGGGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGt                                                                                                                                                       <  1:212452/238‑1 (MQ=255)
                                                                                            aTAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GCGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCCGGCCGG‑CCCTCATCGCTTGCCGCATGCGGCGGGCTGGTCGGGTAACGTTATCa                                                                                                                                             >  1:1068367/1‑238 (MQ=255)
                                                                                            aTAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGCAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCCCTTCGAGCATGGCGCGGCCTGGTCGGGGAAAgggtttc                                                                                                                                             >  1:495369/1‑233 (MQ=255)
                                                                                             tatttttGCGCGGC‑CTGCCCGAACATTTTTCCTTCGGCGGCTTCGCAGTGAATGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCa                                                                                                                                             <  2:360553/231‑1 (MQ=255)
                                                                                             tAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCa                                                                                                                                             <  1:394391/237‑1 (MQ=255)
                                                                                             tAGTTATGCGCGGC‑CTGACCGACAATATACTCTGCGCCGGGTTCGCAGTGACTGAGCAGAGCGTCCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCa                                                                                                                                             <  1:61157/237‑1 (MQ=255)
                                                                                              ggTTATGCGCGGCTCTG‑CCGAAAATATACTCGTCGCCGCGTTCGCAGTGACGGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGt                                                                                                                                                       <  2:1038229/225‑1 (MQ=255)
                                                                                                    ggggggC‑CTGACCGACAATGTTCTCTTCGCCGCTGTCGACGGTACTGAGGAGAGCGCCCAGGTTGGCCTGAGGGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTaaa                                                                                                                                    <  2:980941/235‑1 (MQ=255)
                                                                                                      gcgGC‑CTGACCGACAATATCCTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAaat                                                                                                                                   <  1:545167/238‑1 (MQ=255)
                                                                                                      gcgGC‑CTGACCGAAAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCTGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAaat                                                                                                                                   <  1:573890/238‑1 (MQ=255)
                                                                                                        ggC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGTGCATGGCGCGGCTTGGTCGGGGAACGGTATCa                                                                                                                                             >  1:1038229/1‑226 (MQ=255)
                                                                                                          c‑cTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGGAACGGTATCACTCCGTAaatcaatc                                                                                                                              >  1:116733/1‑239 (MQ=255)
                                                                                                          c‑cTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑ACGCATTAACGGTA‑GGGTCGTCTCCGTCAACGTCGTCCCCAA‑CCGGGGCGG‑CCCTCATAGCCTCGTGCATGGAGCGGCTTGGTCGGGAAACGGTATCACtcgctaaagcaca                                                                                                                               >  1:503443/1‑226 (MQ=255)
                                                                                                               aCCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGTGCATGGCGCGGCTTGTGCGGGTAACGGTATCACTGCGTAAatcaatcaat                                                                                                                           >  1:682347/1‑236 (MQ=255)
                                                                                                                 ccaaattttcctctTCGCCGCGTTCGCAGTGAGTGGGCAGAGCGCCCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCa                                                                                                                        <  2:965238/229‑1 (MQ=255)
                                                                                                                   aCAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTGGAGCATGGGCGGGCTTGGGCGGGGACGGGTAGAACCTCGTAAAACAACCATggacat                                                                                                                      >  2:79762/1‑235 (MQ=255)
                                                                                                                    ccatatACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCa                                                                                                                        <  1:190476/234‑1 (MQ=255)
                                                                                                                     aaTATTCTCTTCGCCGCGTTCGCAGTGACTGAGCAGGGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTaaa                                                                                                                                    <  1:655841/223‑1 (MQ=255)
                                                                                                                     aaTATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCCTCGCTTCGGGCCTGGCGGGGGTTGGGCGGGTAACGGTATCACTCCGGAaatcaaaaaaggcaggg                                                                                                                     >  2:710252/1‑227 (MQ=255)
                                                                                                                         taCTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGCCGGGTAACGGTATCACTGCGTAAATCAATAATGGCA‑TGTCCttt                                                                                                               >  1:608192/1‑238 (MQ=255)
                                                                                                                              ttCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCTCCGCTTCGGGCATGGCGCGCCTTGGTCGGGTAAAGGGATCACTCCGTAAATCAATAAAGGCC‑AGGCCtttttaca                                                                                                          >  2:190476/1‑237 (MQ=255)
                                                                                                                              ttCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCC‑TGTCCTTATTATg                                                                                                          >  1:707777/1‑239 (MQ=255)
                                                                                                                              ttCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGGCGGGTAACGGTATCCCTTCGTCAATCAATCTAGGCA‑TGTcccttttttg                                                                                                          >  1:1041946/1‑231 (MQ=255)
                                                                                                                               tCGCCGCGTTCGCAGTGACTGAGCAGGGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGGCGGGGAAAGGGATCCCTGCGGAAATCAAACACGGCC‑TGTctcttttaaac                                                                                                         >  2:655841/1‑229 (MQ=255)
                                                                                                                                 gccgcGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCACCGCTTCGAGCATGGCGCGGCCTGGGCGGGGAACGGTATCCCCGCGTAAATTAAACATGGGC‑TGTCCTTTATTTGACg                                                                                                       >  2:481350/1‑239 (MQ=255)
                                                                                                                                      gTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGGCGTCCCCAA‑CCGGGGCGG‑CCATCCTCGCTTCGCGCATGGCGCGGCTTGGTCGGGGAACGGGAACACCGCGGAAATCAACCATGGCC‑TGGCCCTATTATTAAGGG‑aaa                                                                                                 >  2:166239/1‑239 (MQ=255)
                                                                                                                                      gTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GAGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATAATCGCTTCGAGCATGTAGCCGCTTGGGCGGGTACGGGGATAACCACCTAAATCAAAAAAGGCC‑TGTTCctattttttcggggaa                                                                                                  >  2:953772/1‑228 (MQ=255)
                                                                                                                                           cAGTGACTGAGCAGGGCGACCAGGTTGGCCTGGGGGCCGGTAGGCAGAAAAAGGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCa                                                                                            <  2:707777/239‑1 (MQ=255)
                                                                                                                                           agaagcaggggCAGGGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCa                                                                                            <  1:795074/229‑1 (MQ=255)
                                                                                                                                                 ctgggccgggcgcCCGGGTTGGCCTGGGTGCCGGGAGGCAAAAAAAGGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCttt                                                                                      <  2:1043370/230‑1 (MQ=255)
                                                                                                                                                            gACCGGGTTGGCCTGAGTGGCGGTAGGCAGAAAAATGGCGGGTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCCGCA‑GGGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGcc                                                                           <  2:1068367/239‑1 (MQ=255)
                                                                                                                                                              ccAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCCCGGCTTGGTCGGGTAACGGGATCACTGCGGAAATCAATCATGGCA‑TGTCCCTATTTTTACGGGAAAAGGCCCCCCTTTTTccccggccct                                                                          >  2:795074/1‑232 (MQ=255)
                                                                                                                                                                   ttGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGGATCACTTCGGAAATCAATCATGGCA‑TGTCCTTATTTTGACGGG‑GAAAGCCACCCCTTTTaacctcacccggttgt                                                                    >  2:457195/1‑224 (MQ=255)
                                                                                                                                                                         tGAGTGCCGGGAGGCAAAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCg                                                               <  1:953772/238‑1 (MQ=255)
                                                                                                                                                                          ggttGCCGGTAGGCAGAAAAATGGCGGTTTCTTTACCGGAACGCTCTGCTCGGTAGTCCTGCA‑GGGCATTACCGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGcc                                                             <  2:515588/236‑1 (MQ=255)
                                                                                                                                                                          gAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGcc                                                             <  1:79762/239‑1 (MQ=255)
                                                                                                                                                                           aGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGGGCATGGCGGGGCTTGGTAGGGGAACGGGATAACCTCGGAAATCAATCATGGGAGTGCCCTTTTTAAAGCGGG‑AAAAGCCCCCCTTTTTACTTTACCAAGTTTTTTTTccct                                                             >  2:572848/1‑236 (MQ=255)
                                                                                                                                                                           aGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGGATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGAGCGG‑AAATGCCACCCTTTTTACCTTATCCAGTTTTTTTTTGCCa                                                            >  2:788340/1‑239 (MQ=255)
                                                                                                                                                                             tcccGTTAGGCAGAAAAAGGGGGGTTTTTTTCCCGGAAAGCTCTGGTGCGTAGTCCTGCA‑GGGCATTACCGGTA‑GGGTCGTCTCCGTAAACGGCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAg                                                           <  2:495369/236‑1 (MQ=255)
                                                                                                                                                                                cGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTaa                                                                                                                                                     >  1:976142/1‑147 (MQ=255)
                                                                                                                                                                                cGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTaa                                                                                                                                                     <  2:976142/147‑1 (MQ=255)
                                                                                                                                                                                cGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGGATCACTCCGTAAATCAATCATGGCA‑TGGCCTTATTATTACGGG‑AAATGCCACCCCTTTTACCTTAGCCAGGTTGTTTTTCCCAGTTCg                                                       >  1:385450/1‑239 (MQ=255)
                                                                                                                                                                                  gtgggCAAAAAAAGGGGGGTTTTTTTCCCGGAAAGCCCTGTCGGGTAGCCCTGGA‑GGGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGAt                                                     <  2:991487/236‑1 (MQ=255)
                                                                                                                                                                                  gTAGGCAGAAAAATGGCGGTTTCTTTCCCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCGCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGAt                                                     <  2:54658/239‑1 (MQ=255)
                                                                                                                                                                                   tAGGCCGAAAATTGGCGGCTTTTTTACCGGAAAGCTCGGCTGGGTAGTCCTGCA‑GAGCCGTAACGGTA‑GGGTCGGCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGAt                                                     <  2:935663/238‑1 (MQ=255)
                                                                                                                                                                                   tAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGAt                                                     <  1:710252/238‑1 (MQ=255)
                                                                                                                                                                                    aGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGGCCTGCA‑GGGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCa                                                   <  1:572848/239‑1 (MQ=255)
                                                                                                                                                                                     ggCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATGGCATCGAGCCAGGCGCGGCTTCGCCCGGCAACGGAGACACGTCTTAAATCAATCATGTCA‑TGTCCTTATTTATAAGGG‑AAATGCAACCCCTTTTTCCTTAACCGGGTTGttttgcccacgtagagcaa                                                  >  2:1049457/1‑224 (MQ=255)
                                                                                                                                                                                                               ggAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGAATAACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTAACTTATCCAGTTTGTTTTTGCCAGTTTGATCACATCATCACCGCCACCGCtgatgcatt                        >  1:353112/1‑235 (MQ=255)
                                                                                                                                                                                                                  cggCTCTGCTGCGTAGTCCTGCA‑GGGCATTAACGGTA‑GGGTCGTCCCCGTAACCGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTgcgc                     <  2:1026140/237‑1 (MQ=255)
                                                                                                                                                                                                                  aatccctggtgGGTAGTCCTGCA‑GGGTCTTAACGGTT‑GGGTCGTCTCCGTAAACGTCGTCCCAAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTgcgc                     <  2:503443/234‑1 (MQ=255)
                                                                                                                                                                                                                  aaGCTCTGCTGCGTAGTCCTGCA‑GGGGATTAACGGTA‑GGGTCGGCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTgcgc                     <  2:824622/239‑1 (MQ=255)
                                                                                                                                                                                                                  aaGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGGCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTgcgc                     <  1:457195/239‑1 (MQ=255)
                                                                                                                                                                                                                   agcttggcttggTAGGCCTGGA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTgcgc                     <  1:293603/227‑1 (MQ=255)
                                                                                                                                                                                                                   aactctGGGGCGTAGTCC‑GCACGGGCATGAACGGTG‑GGGGCGTCTCCGTAAACGTCGTCCCCAC‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCCCTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTgcgc                     <  2:682347/236‑1 (MQ=255)
                                                                                                                                                                                                                   aGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTgcgcg                    <  1:63675/239‑1 (MQ=255)
                                                                                                                                                                                                                   aGCTCGGCTGCGTAGTCCTGCA‑GAGGATGAAGGGGA‑GGGTCGTTCGCGGAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTgcgc                     <  1:486601/238‑1 (MQ=255)
                                                                                                                                                                                                                      ccgtgtgtgTAGTCCGGGA‑GGGCATTAACGGTA‑GGGTTGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTGGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCgcag                 <  1:661629/231‑1 (MQ=255)
                                                                                                                                                                                                                            gggTATTCCGGCA‑GGGCGTTAACGGGA‑GGGTTCTCTCCGTAAACGTCGGCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCGCAGCAtata           <  2:561344/237‑1 (MQ=255)
                                                                                                                                                                                                                            gcGTAGTCCTGCA‑GGGCATTAACGGTA‑GGGTCGTTCCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCGCAGCAtata           <  1:788340/239‑1 (MQ=255)
                                                                                                                                                                                                                            gcGTAGGCCTGGA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCGCAGCAtata           <  1:166239/239‑1 (MQ=255)
                                                                                                                                                                                                                             cGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCGCAGCATATAc          <  1:390995/239‑1 (MQ=255)
                                                                                                                                                                                                                              gTAGGCCTGCA‑GGGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCGCAGCATATAc          <  1:1072706/238‑1 (MQ=255)
                                                                                                                                                                                                                               tAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTTTTATGACGGG‑AAATGCCACCCTTTTTACCTTTGCCAGTTTGTTTTTCCCAGTTAGATCCCTTCATCCCCCCGTCCGCTGATGATTTGCCgcagcaataaaag        >  2:1072706/1‑232 (MQ=255)
                                                                                                                                                                                                                               tAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCCGATGATTGTGCGCAGCCtata           >  1:1026140/1‑236 (MQ=255)
                                                                                                                                                                                                                                    cggga‑gagCATTAAGGGTAGGGGTCG‑CTCCGTAAACGGCGTCCCCAA‑CCGGGGCGG‑GCATCACCGGTTCGGGCATGGGGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCGCAGCATATACAGGCTGa   <  2:1041946/235‑1 (MQ=255)
                                                                                                                                                                                                                                       cA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAATTCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCTCCAGTTCGTTACCTTCACAACCCCGTCCGCTGATGATTCGGCGCGGCATATACAGGCGGaa  >  1:12580/1‑237 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                              
ACTTTATCCAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGC‑CTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTGCCGGTAGGCAGAAAAATGGCGGCTTCTTTACCGGAAAGCTCTGCTGCGTAGTCCTGCA‑GAGCATTAACGGTA‑GGGTCGTCTCCGTAAACGTCGTCCCCAA‑CCGGGGCGG‑CCATCATCGCTTCGAGCATGGCGCGGCTTGGTCGGGTAACGGTATCACTGCGTAAATCAATCATGGCA‑TGTCCTTATTATGACGGG‑AAATGCCACCCTTTTTACCTTAGCCAGTTTGTTTTCGCCAGTTCGATCACTTCATCACCGCGTCCGCTGATGATTGCGCGCAGCATATACAGGCTGAA  >  NC_000913/908948‑909414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A