Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,761,252 A→C 16.2% G180G (GGT→GGG)  sufD ← component of SufBCD Fe‑S cluster assembly scaffold

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,761,2520AC16.2% 234.5 / 3.8 108G180G (GGT→GGG) sufDcomponent of SufBCD Fe‑S cluster assembly scaffold
Reads supporting (aligned to +/- strand):  ref base A (48/35);  new base C (4/20);  total (52/56)
Fisher's exact test for biased strand distribution p-value = 4.10e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

CGTACTGGTGTTGTGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCTCACTTCATATCCGCT  >  NC_000913/1761015‑1761482
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                       
cGTACTGGTGTTGTGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGGGAACCGTGCCCCGGCAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCa                                                                                                                                                                                                                                         >  1:916365/1‑238 (MQ=255)
 gTACTGGTGTTGGTTCTGACCCCTGCGCCCCCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCAcc                                                                                                                                                                                                                                       <  2:244697/239‑1 (MQ=255)
     tGGTGTTGTGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGAGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTc                                                                                                                                                                                                                                    >  1:244697/1‑238 (MQ=255)
          ttgtGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGGGCATCATCAAGGCTGACAAAATGTTCGAT‑CACCGTTGATTCGGCACCTTCCGccag                                                                                                                                                                                                                              >  2:496257/1‑239 (MQ=255)
               tCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCACGTGGGCATTCGCTG‑CGACGTTGATATGGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCCTTGTTTCGGCCCCTTCCGccagatcca                                                                                                                                                                                                                         >  2:243661/1‑239 (MQ=255)
               tCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTGAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGccagatcca                                                                                                                                                                                                                         >  1:117879/1‑239 (MQ=255)
               tCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGccagatcca                                                                                                                                                                                                                         >  1:695231/1‑239 (MQ=255)
               tCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTCCGAT‑CACCGTTGCTTCGGCACCTTCCCccaaaacca                                                                                                                                                                                                                         >  2:293780/1‑239 (MQ=255)
                  tAACCCCGCCCCCCCCAGCAGGAAACTTTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGccagatccagat                                                                                                                                                                                                                      <  2:1014552/239‑1 (MQ=255)
                  tAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACACAATGTTCGAT‑GCCCGTTGCTTCGGCCCCTTCCGccagatccagat                                                                                                                                                                                                                      >  1:77376/1‑239 (MQ=255)
                  tAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCCccagatccagat                                                                                                                                                                                                                      >  1:1014552/1‑239 (MQ=255)
                    acacTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGGGCATCATTCAGGCTGAAAAAAAGTTCGAT‑CACCGGTGCTTCGGCACCTTCCGccagacccaaaaag                                                                                                                                                                                                                    >  2:513644/1‑234 (MQ=255)
                       cttcgcCCCCCAGCAGGAAACTGTGGCTAAATGCGGTGTCATCCTCAGCCCGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGt                                                                                                                                                                                                                 <  1:445532/236‑1 (MQ=255)
                       cTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATTTTCGAT‑CACCGTTGCTTCGGAACCTTCCGccagaaccaaaagaggg                                                                                                                                                                                                                 >  2:379335/1‑231 (MQ=255)
                         gcgcCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGtgg                                                                                                                                                                                                               >  1:455566/1‑237 (MQ=255)
                         gcgcCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGAGGTCg                                                                                                                                                                                                               >  1:1084903/1‑239 (MQ=255)
                         gcgcCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGCTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCg                                                                                                                                                                                                               >  1:495822/1‑239 (MQ=255)
                         gcgcCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACCCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAACATGTTCGAT‑CACCGATGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCg                                                                                                                                                                                                               >  1:1021741/1‑239 (MQ=255)
                            cccccccGCAGGAAACTGTGGCTAAATGCGTGGGCATCCTCAGCCAACACTAAATCGTGTTGAGCAAAGGGGTGACTGGGCGGGTTGTCAAACGCCAGGTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCAGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTa                                                                                                                                                                                                            <  2:857575/236‑1 (MQ=255)
                               cccAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCCCCAGATCCAGACAATGTCGGaaaag                                                                                                                                                                                                         >  2:705746/1‑237 (MQ=255)
                                       gAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCACACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTACGCCAGATCCAGATGCTGTCGGTAATGTGC‑Agtg                                                                                                                                                                                                 >  1:899616/1‑238 (MQ=255)
                                         aaCTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGtt                                                                                                                                                                                               <  1:958990/238‑1 (MQ=255)
                                         aaCTGTGGCTAAAGGGGGTGGCATCCTTAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCAAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGtt                                                                                                                                                                                               <  1:11457/238‑1 (MQ=255)
                                              tgGCTAAATGCGGTGGCATCCTCATCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGCGGGCATTCGCTG‑CGACTTTGATAGTGAACAGTGCCCCGGTAAACTGA‑CGAGCATCATTCTGGCTGCCAACATATTCGTT‑GACCGTTGCTTCGGCACCTTCGGCCCGTTCCAGAGTATGTTGGTAAACGGC‑AGGGTTcccc                                                                                                                                                                                           >  2:721096/1‑237 (MQ=255)
                                              tgGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCAcc                                                                                                                                                                                           >  1:804585/1‑237 (MQ=255)
                                                       ggggTGGCTCCCTCATCACGCAAAAAATCGTTATGAGCAAAGTGGTGACGGGGCGGGTTTTCAAAGGCCTGCTGGATATGC‑TTCAATGGGGCATTCGCGG‑CGACTTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCACTCAGGCTGACAAAATGTTCGAT‑CTCCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGA‑AGTGTTCACCTCTTCACCTGc                                                                                                                                                                                <  2:1026183/237‑1 (MQ=255)
                                                        gggTGGCCTCCTCCGCCAGAAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGcc                                                                                                                                                                               <  1:379335/238‑1 (MQ=255)
                                                         ggtggccttcgtcgccagcAACAAATGGTTAGGAGCAAAGGGGGGGCTGAGCGGTTTTTAAAACGGCAGCTTGATATGC‑TGCAAGGGGGCATTCGCTG‑CGGCGTTGAAAGTTAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGAGGATGGCGGTAATGGGC‑AGTGTTCACCTCGTCACCTGcc                                                                                                                                                                               <  2:248880/225‑1 (MQ=255)
                                                         ggTTGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGcc                                                                                                                                                                               <  1:513644/238‑1 (MQ=255)
                                                          ggggCTTCCTCAGCCAGCAACAAATCGTTTGGAACAAAGTGGTGACTGGGCGGTTTTTCAAACGCCTGCTTGATATGC‑GGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGGTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCCCCTGCCa                                                                                                                                                                              <  2:899616/236‑1 (MQ=255)
                                                          gTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGAACCTTCCGCCAGATCCAGAGGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCCGcccc                                                                                                                                                                             >  2:1058045/1‑237 (MQ=255)
                                                              cATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGcc                                                                                                                                                                          <  1:226147/238‑1 (MQ=255)
                                                              cATCCGCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGcc                                                                                                                                                                          <  1:99873/238‑1 (MQ=255)
                                                                tCCTTAGGCAGCAACAAAACGTTAAAAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATAAGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGATCCGTGCCACGGTAAAATGA‑CGGGCATCATTCAGGCTGACAAAATGTTCGAT‑CCCCGTTACTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCt                                                                                                                                                                        <  1:132477/238‑1 (MQ=255)
                                                                        cagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTTGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGata                                                                                                                                                                <  1:540243/238‑1 (MQ=255)
                                                                           caacaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCa                                                                                                                                                            >  1:702903/1‑239 (MQ=255)
                                                                           caacaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGT‑GGCATTCCCTGCCAAGGTTGTTACAGAA‑CGTTCCCCCGTAAAATGACCGGGCATAATCAAGGTTGCAAAATTGTTCGTC‑CCCCGTTGCTCCGGCCCCTCCCCCAAGCTCCAGAGGA‑GTTTGGAACGGGCAAGGGTTCACCTTCTCCCCTGCCCCCCCCTggggaaaatcct                                                                                                                                                            >  2:662925/1‑230 (MQ=255)
                                                                               aaaTCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTaa                                                                                                                                                        <  1:705746/239‑1 (MQ=255)
                                                                                    gTTTTGAGACAAGTGGGGCGTGGGCGGGTGTTAAAACGCCGGCTGGGTGTGC‑TGCAAGTGGGGATTCGCTG‑CGACGGTGATAGTGAACCGTGGCCCGGTAAAATGA‑CGGGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTGGCTGCGGCTCCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGGTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCa                                                                                                                                                   <  2:386079/239‑1 (MQ=255)
                                                                                     ttATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑TGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGACTTAACAGCaa                                                                                                                                                  >  1:134153/1‑239 (MQ=255)
                                                                                      tATGTGGAAAGTGGTGACTGGGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCaa                                                                                                                                                  <  1:286985/238‑1 (MQ=255)
                                                                                          aGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCAc                                                                                                                                                                                            >  1:725607/1‑192 (MQ=255)
                                                                                           gCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGGGTTCACCTCTTCACCTGCCACGCCCGGGGGGTAATGCATAAAAAGCAACGGGtt                                                                                                                                            >  2:918450/1‑239 (MQ=255)
                                                                                               aGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGCGGGCATTCGCTG‑CGCCGTTGATAGTGAACCGTGCACCGGTAAAATGA‑CGAGCATCATTCAGGATGACAAAATGTTCGAT‑CACCGTTGATTCGGAACCTTCCGCCAGATCCAGATGATGTCGGTAATGGAC‑AGGGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgcc                                                                                                                                        >  1:31792/1‑239 (MQ=255)
                                                                                                    tgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑CGTGTTCACCTCTTCCCCTCCCACGCCCTGGGGGATATGCATTAACAGCAATGGCTTTtccgcccg                                                                                                                                   >  2:537352/1‑239 (MQ=255)
                                                                                                    tgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccggccg                                                                                                                                   >  1:456422/1‑239 (MQ=255)
                                                                                                    tgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccggccg                                                                                                                                   >  1:745387/1‑239 (MQ=255)
                                                                                                           gCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCg                                                                                                                                                                                                               >  1:47638/1‑157 (MQ=255)
                                                                                                           gCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCg                                                                                                                                                                                                               <  2:47638/157‑1 (MQ=255)
                                                                                                           gCGGGGTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGTGCATCCTTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCGGGGTGCTAGGACTTAACACAAATGGCTTTgccggcctgtaaccc                                                                                                                            >  2:647196/1‑231 (MQ=255)
                                                                                                            cGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACcg                                                                                                                            <  1:959045/238‑1 (MQ=255)
                                                                                                            cGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAAAAGCAATTGCTTTCCCGGCCGTTGAccc                                                                                                                            >  1:539016/1‑237 (MQ=255)
                                                                                                                  ttCAAACGCCAGCTTGATATGC‑CGCAAGTGGGCATTCCCGG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCa                                                                                                                     <  1:943250/239‑1 (MQ=255)
                                                                                                                    caacccccAGCTTGGT‑TGCTTGCAAGGGGGCATTCCCCT‑CGAGGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCCTCATTCAGGCTTACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACg                                                                                                                   <  2:916365/233‑1 (MQ=255)
                                                                                                                    cAACCGCCAGGTTGGTTGGC‑TGCAAGGGGGCATTCGCGG‑CGACGTGTAGAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCTTCATGCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGGACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACg                                                                                                                   <  2:82721/239‑1 (MQ=255)
                                                                                                                                     tgc‑tgcAAGGGGGCATGCGCGT‑CGGCGTGGATAGGAAACCGTGCCCCGGTAAAATGA‑CGAGCATCATGCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCCCCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCt                                                                                                  <  2:629030/239‑1 (MQ=255)
                                                                                                                                      aagggcctgTGGGCATTCGCTT‑CGACGTTGATTGGGAACCGTCCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTTACAAAATGTTCGAT‑CTCCGTTGCTCCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AATGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCt                                                                                                  <  1:74448/231‑1 (MQ=255)
                                                                                                                                         tgcAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGcc                                                                                                                                                                                                                                >  2:227060/1‑111 (MQ=255)
                                                                                                                                         tgcAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGcc                                                                                                                                                                                                                                <  1:227060/111‑1 (MQ=255)
                                                                                                                                             aGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGCAATGCGTCACGCTTTGTGcc                                                                                           >  1:919936/1‑239 (MQ=255)
                                                                                                                                             aGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCCAGATTTGTGcc                                                                                           >  1:166028/1‑239 (MQ=255)
                                                                                                                                                   cATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATACTTCACGCTTTTTGCCAGGCt                                                                                      >  2:400005/1‑238 (MQ=255)
                                                                                                                                                          tG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CAACGTTGCTTCGCCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGGGATATGCATTAACAGCAATGCCTTTGCCGGCCTTTGACCGCGCTTCACGGCGATATGAGTCCCGCTTTGCGCCAGGcctggccctt                                                                              >  2:74448/1‑230 (MQ=255)
                                                                                                                                                          tG‑CGACGTTGAGAGTGAACCTTGACCCGTTAAAATGA‑CGGGCATCATTCAGGCGGACAAAATGTGCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATTATGTCGGTAATGGGC‑AGTGTTCACCTCTTCTCCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCa                                                                              <  1:737065/239‑1 (MQ=255)
                                                                                                                                                                tgTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATTTTCGAT‑CACCGTTGCTTCGGCCCCTTCCGCCAAATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATg                                                                          <  1:522891/237‑1 (MQ=255)
                                                                                                                                                                cgggtttatgtaaCCGGGCCCCGGGAAAAGGA‑CGAGCACCATTCGGGCTGGCAAAATGTTCGAC‑ACCCGTTGCTTGGGCACCTTCCGCCAGATCCAGAGGAGGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGc                                                                         <  2:745387/228‑1 (MQ=255)
                                                                                                                                                                          tcgccttGCCCCGGTAAAATTA‑GCGGGATCATTCAGGATGACAAAATGGTCGGT‑CCCCGTTGCTTCGGCCCCTTCCGCCAGATCCAGATGATGGCGGTAATGGGC‑AGTTTTCACCTCTTCACCTGCCACGCCCTGGTTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACt                                                                <  2:403029/232‑1 (MQ=255)
                                                                                                                                                                          gAACCGTGCCCCGGTAAAATGA‑CCAGCATCATTCAGGCTGAAAAAATGTTCGAT‑CACCGTTGCTTCGGTCCCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACt                                                                <  1:384774/238‑1 (MQ=255)
                                                                                                                                                                           acccGTCCCCCGGTAAAATGA‑CGGGCATCATTCAGGTTGACAAAATGTTCGAT‑CCCCGTTGCTTCGGCCCCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTc                                                              <  2:919936/237‑1 (MQ=255)
                                                                                                                                                                              cttGCCCGGGTAAAAGTG‑CGGGCATTTTTCAGGGCGACAAAATGTTCGAG‑TGCGGTTGGTTCGGCACCTTCCGCCAGTTCCAGATGATGGCGGTAATGGGC‑AGTGTTCCCCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGc                                                           <  2:872293/237‑1 (MQ=255)
                                                                                                                                                                                tGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGGGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCt                                                         >  1:940158/1‑239 (MQ=255)
                                                                                                                                                                                  ccccGGTAAATTGC‑CGGCCATTTTTCCGGCTTACAAAATTGTCGGT‑CCCTGTTGTTTCGGCCCCTTCCGCCAGGTCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTCCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGa                                                       <  2:485757/239‑1 (MQ=255)
                                                                                                                                                                                        tAAATTGA‑CGGGCCTCACTCAGGTCGTCAAAATGGTCGGT‑GCCCGTTGCTTCGGCCCCTTCCGCCAGATCCAGAGGATGGCGGTAATGGGC‑AGTGCCCACCTCTTCCCCTGCCCCGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCg                                                 <  2:319047/239‑1 (MQ=255)
                                                                                                                                                                                         aaaaTGA‑CGCGCTCTATTCAGGCTGACAAAATTTTCGAT‑CGCCGTTGCTTCGGCCCCTTCCGCCAGATCCAGATGATGGCGGGAATGGGC‑AGTGTTCACCTCTTCCCCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGt                                                <  2:134153/239‑1 (MQ=255)
                                                                                                                                                                                         aaaaTGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCCCCTTCCGCCAGCTCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCg                                                 <  1:496257/238‑1 (MQ=255)
                                                                                                                                                                                           aaTGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCAAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCg                                              >  1:50526/1‑239 (MQ=255)
                                                                                                                                                                                                 cGAGCATCATTCCGGCTGACAAAATTGTCGAT‑CCCCGTTGCGTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCGCCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTa                                          <  1:243661/238‑1 (MQ=255)
                                                                                                                                                                                                  gAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGt                                                >  2:793363/1‑231 (MQ=255)
                                                                                                                                                                                                  gAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGt                                                <  1:793363/231‑1 (MQ=255)
                                                                                                                                                                                                        catTCAGGGTTAAAAAATGTTCGGTCCACTGTT‑CTTGGGACCCTTCCGCCACACCCCGATGATGTCGGTAAGGGGC‑AGTTGTCACCTCTGCCCCTGCCACGCCCTGGGTGATATGCATGAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACTCTTCCGCCTGAATAGCGTCGGGTAACCCCTGa                                  <  2:77376/239‑1 (MQ=255)
                                                                                                                                                                                                        catTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCCGAAACACTTCCGCCTGAATCGCCTCGGGTAAACCCtt                                   >  1:1069346/1‑237 (MQ=255)
                                                                                                                                                                                                          ttCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGGAATGCGTCACGCTTTGTGCCAGGCTTTCCGGCAAATCCCGAAACACTTCCCCCTGaaaaaccgcggggaaaaccccgcg                                >  2:596290/1‑217 (MQ=255)
                                                                                                                                                                                                               gCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCCGGCTTTCCGTCAAATGCAGAAACCCTTCCGCCTGAATAGCGCCGGGTAAAACCCCACGggcgg                           >  2:488168/1‑238 (MQ=255)
                                                                                                                                                                                                                   gcAAAATGTTTGTG‑CACCGTTTTTTCGGCCCCTTCCCCCAGACCCAGGTGTTGGTGGTAAGGGGC‑AGTTTTCCCCTCTTCACCTGCCCCGCCCGGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGGGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTcgtcgt                        <  2:560370/237‑1 (MQ=255)
                                                                                                                                                                                                                   aCAAAATTTTCGTG‑CCCCTGTGCGTCGGCCCCTTCCCCCAGAGCCCGATGATGTCTGTAATGGGC‑AGTGTCCACCGCTTCCCCTGCCACGCCCTGGGTGATATGCATTAACAGCAATTGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAGCCCTGACGGTCGTCGtt                       <  2:31792/239‑1 (MQ=255)
                                                                                                                                                                                                                   aCAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATACCGTCGGGTAAACCCCGACGTTGCTCGtt                       >  1:514761/1‑239 (MQ=255)
                                                                                                                                                                                                                    cAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGCCGGGTAAACCCTGCCGGTCGTCGTTa                      >  1:279974/1‑239 (MQ=255)
                                                                                                                                                                                                                       atttttCGTT‑CACCGTTGTTTTGGCACCTTCCGCCAGGTCCAGAGGAGGGGGGTAATGGGC‑AGTGTTCACCTCTTCCCCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATg                   <  2:455566/235‑1 (MQ=255)
                                                                                                                                                                                                                        aTGTGCGAA‑CTCCTTTGCTTCGCCCCCCTCCGCCAGCTCCAGATGGTGCCGGTAATGGGC‑AGTGTTACCCCCTTACCCTGCCCCGCACTGGGTGAGATGCATTAACAGCAATGGCTTTGCCGGCCGGTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGGGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGc                  <  2:643846/239‑1 (MQ=255)
                                                                                                                                                                                                                         ttttCGAT‑CACCTTTGCTTCGGCCCTTCCCCCCAGACCCGTGTGATGTCGGGAATGGTC‑ATTGTTCCCCTCGTCCCCTGCCCCGCCCGGGTTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCt                 <  2:166028/237‑1 (MQ=255)
                                                                                                                                                                                                                         tGTTCTCT‑CGCCGTTTCTTCGGCCCCTTCCGCCCGAACCGAGTGATGTGGGTAATGGGC‑AGGGTTAACCTCTTCCCCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTGGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCt                 <  2:695231/239‑1 (MQ=255)
                                                                                                                                                                                                                         tGTTCGAT‑TCCCGTTGCTTCGGCACCTTCCTCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCt                 <  1:400005/239‑1 (MQ=255)
                                                                                                                                                                                                                          ttttggtgccccGTTGCTCCGGCCCCTTCCCCCAGATCCCATGGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCCCCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCt                 <  2:50526/229‑1 (MQ=255)
                                                                                                                                                                                                                           ttCGAG‑CACAGTGTCCTCGGCACCCTCCGCCAGATCCGGATAAGGTCGGTAATGGGC‑AGTGTGCGCCCCTTCTCCTGCCACGCCCTGGGTGATATGCATTATCAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCt                 <  1:721096/237‑1 (MQ=255)
                                                                                                                                                                                                                             tgttttcccgttcttccGGCCCCTTCCGCCCGATCCGGTGGTGGTCGGTAAGGGGC‑TGTGTTCACCTCTTCCCCCGCCACGCCCTGGGTGATTTGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCTCAc              <  2:545479/223‑1 (MQ=255)
                                                                                                                                                                                                                             cGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAAAACTTCCGCCTGAATAACGTCGGGGAAAACCCGACggcggccgtaaaagcccac              >  2:463941/1‑221 (MQ=255)
                                                                                                                                                                                                                                    ccttttgttCGGCCCTTTCCGCCAGATCCAGATGATGTGGGTAAGGGGC‑AGTGTTCACCTCTTCCCCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCTCACTTCatat       <  2:336599/232‑1 (MQ=255)
                                                                                                                                                                                                                                    ccGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCTCACTTCata        >  1:352878/1‑238 (MQ=255)
                                                                                                                                                                                                                                         gCTTCGGCCCCCTCCGCCGTATCCAGATGATTGCGGTAATGGGC‑AGTGTTCCCCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCTCACTTCATATCCGCt  <  1:1085967/239‑1 (MQ=255)
                                                                                                                                                                                                                                         gCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCTCACTTCATATCCGCt  <  1:586326/239‑1 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                       
CGTACTGGTGTTGTGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGC‑TGCAAGTGGGCATTCGCTG‑CGACGTTGATAGTGAACCGTGCCCCGGTAAAATGA‑CGAGCATCATTCAGGCTGACAAAATGTTCGAT‑CACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGC‑AGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCCGTTGACCGCGCTTCACGGCGATATGCGTCACGCTTTGTGCCAGGCTTTCCGTCAAATGCAGAAACACTTCCGCCTGAATAGCGTCGGGTAAACCCTGACGGTCGTCGTTAATGCTCACTTCATATCCGCT  >  NC_000913/1761015‑1761482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A