Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,860,118 T→C 10.3% S38G (AGT→GGT)  ydjK ← putative MFS sugar transporter, membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,860,1180TC10.3% 301.0 / 2.6 120S38G (AGT→GGT) ydjKputative MFS sugar transporter, membrane protein
Reads supporting (aligned to +/- strand):  ref base T (44/60);  new base C (5/9);  total (49/71)
Fisher's exact test for biased strand distribution p-value = 7.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 121 total aligned reads displayed.

GCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATA  >  NC_000913/1859883‑1860346
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                    
gcaATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGGGGTGGAATTATCTGTCCAGCCCAAAGCTTTCAGCTGCGCGAGGATAAAACCACCAACGGCATTACTCca                                                                                                                                                                                                                                   >  1:744520/1‑239 (MQ=255)
   aTAAGGAAATCCATAGTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCCGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCcagca                                                                                                                                                                                                                                <  1:602970/239‑1 (MQ=255)
          aaTCCATATTCGGTGAGAAAGCCCCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAcaag                                                                                                                                                                                                                          <  1:932086/238‑1 (MQ=255)
          aaTCCATATTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGGATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGGGGAATTTTCTGTCCAGCCCAACGCTTTCAGGTGTGCGAGGATCAAGCCACCACAGGCATTAACCCACCAGAcaagc                                                                                                                                                                                                                         >  1:514468/1‑239 (MQ=255)
          aaTCCATATTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCCGAcaagg                                                                                                                                                                                                                         >  1:957818/1‑238 (MQ=255)
           aTCCATATTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGGGGTGGAAATATCTGTCCACCCCAACGCTTTCAGCGCCGCGAGGGTCAAGCCACCAACGGCATTccaccacaaaaaaaaaa                                                                                                                                                                                                                        >  2:1006590/1‑228 (MQ=255)
                tatTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCa                                                                                                                                                                                                                   >  1:425215/1‑239 (MQ=255)
                       tGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGGGAATGGGGCTGTGGGGGGATTTTCTGTCCACCCCAACGGTTTCCCCGGCCGCAGGATCAAGCCCCCAACGGCCATACCCCAGCAAAAAAACAAACaaaaaccga                                                                                                                                                                                                            >  2:844110/1‑234 (MQ=255)
                       tGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACCAGCAAGCCAAAcgcgc                                                                                                                                                                                                            >  1:176284/1‑238 (MQ=255)
                       tGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGGGGGGGAAATATCTCTCCAGACCAACGCTTTATGCTGCGGGGGGGTCAAACCACACACGGGATTACCCcacaacacacaaaaaccaaaaacgg                                                                                                                                                                                                            >  2:279697/1‑216 (MQ=255)
                          gaAAGCAACGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGcgacg                                                                                                                                                                                                          <  1:25006/238‑1 (MQ=255)
                              acccccccacccctCGAGGCCAATTGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGGCGCCAATGATGCCGCCCACCAGCGCCCCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGc                                                                                                                                                                                                     <  2:1073364/226‑1 (MQ=255)
                                cccGACAACCATCGGGGCAATTTGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGGCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGc                                                                                                                                                                                                     <  1:352629/236‑1 (MQ=255)
                                cccGACAACCAGCGGGTGATTATGAATGGCATCATAGAGAATGACCGCACTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCGCCAGCGCAGCGAGAAACATTCCGGCGGGCGGGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGc                                                                                                                                                                                                     <  2:711126/236‑1 (MQ=255)
                                                    tatGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCGGTGGTGGAATTATCTGTCCAGCCCAACCCTTTCACCTGCGCGAGGGTCAAACCACCAACGGCCTTAATCACGCAGCCAAGCAAGCCAACCGCGCCGATCGCCAAAATTAAGAAATCCCAGCga                                                                                                                                                                               >  2:155143/1‑238 (MQ=255)
                                                     gttgaTGGCCTCATGGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAGTGATGCCGCCCACCAGGGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTGCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGc                                                                                                                                                                              <  2:43643/235‑1 (MQ=255)
                                                        aagggCCCCAAAGAGGATGAACGCATTTCTGCGACCGG‑TTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATc                                                                                                                                                                          <  1:930941/236‑1 (MQ=255)
                                                          tGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGGGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGTCATTACTCCAGCCGACAAGCAAGCCAAAACCGACGAAGGCCAACATTCATGAATGCCAGCGGAAATcc                                                                                                                                                                         >  1:201299/1‑239 (MQ=255)
                                                              cTCATAGAGGATGAACGCATTTCTGCGACCGTTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTa                                                                                                                                                                     <  1:367309/239‑1 (MQ=255)
                                                              cTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCCGCTGCGCGAGGATCAAGCCACCCACGGCCTTACTCCCGCAGACAAGCCAGCCAAACGCGCCGATGGCAAAAATTGATAAATACCCACGGCAATCCggaa                                                                                                                                                                     >  2:453287/1‑237 (MQ=255)
                                                              cTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGGTCAAGCCACCAACGGCATTACTCCCGCAGACAAGAAAGCCAAACGCGACGATGGCAAAAATTGATGAAAGCCAACGGCAAAcccgga                                                                                                                                                                     >  2:955334/1‑235 (MQ=255)
                                                              cTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATTAATGCCAGCGGCAATCCGGTa                                                                                                                                                                     >  1:994231/1‑239 (MQ=255)
                                                                 aTAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGGGGGGGACTTATCTGTCCCGCCCAACGCTTTAAGCTGCGCGAGGATCAAGCCCCCAACGGCCTTACTCCAGCAGCCAAGCCAAACAAAAGCGCCGCTGGCACACATTTAGAAAACCCACCGGCAAACCGGGaaag                                                                                                                                                                  >  2:1066074/1‑237 (MQ=255)
                                                                  tAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCCGCTGCGCGAGGGTCAAACCCCCAACGGCATTACTCCCGCCAACAAACAAGCCAAACGCGACGCTCGCCAACACTTATAAAAGCCAGCggacaaccggcaacgg                                                                                                                                                                 >  2:152407/1‑225 (MQ=255)
                                                                       gATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCATCTGCGCCAGGATCAAGCCACCAACGGCATTACTCCAGCAGCCAACCAAGCCCAACCAGACGAGGGCAAACATTGATCAAAGCCACCGGCAACCCGGTaaaggaacc                                                                                                                                                             >  2:18177/1‑231 (MQ=255)
                                                                       gATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCCCCAACGGCATTAACCCCGCAAGAAAACAAGCCAAACCCCACGATGGCAAAAATTGATGAATGCCAACGGCAAACCGGaaaagcaccc                                                                                                                                                             >  2:488230/1‑231 (MQ=255)
                                                                       gATGAACGCATTTCTGCGACCGG‑TTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCCATCCGGGAAGCCGTCCa                                                                                                                                                            >  1:639058/1‑238 (MQ=255)
                                                                         ttaccGCTTTTCTGGCCCCGGTTTTGGCCCCAATGATGCCCCCCACCAGCGCACCGAGAAACATTCGGGCGGGCGTGATTGCTGAGAATGGGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg                                                                                                                                                           <  2:1000522/234‑1 (MQ=255)
                                                                         tgacctcctttgttcgcccGTTTTTGGCCCCAATTATGCCGCCCGCGAGCGCCCCGAGAAACACTCCGGCGGTCGTGATTGCTGAGAAGGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg                                                                                                                                                           <  2:487635/221‑1 (MQ=255)
                                                                         tGAACGTATTTCGGGGACGGGTTTTGGCGCCAATGATGCCGCCCACCAGCGCCCCGAGAAACCTTCCGGCGGTCGTGATTGCTGAGAATGGGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg                                                                                                                                                           <  2:399279/238‑1 (MQ=255)
                                                                         tGAACGCATTTTAGGGACCGGTTTTGTCGCAAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg                                                                                                                                                           <  1:462382/238‑1 (MQ=255)
                                                                         tGAACCCATTTCTGCGACCGGTTTTGGCGCCAATGAAGCCGCCCACCAGCGCACCGAGAAACATTACGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg                                                                                                                                                           <  1:155143/238‑1 (MQ=255)
                                                                           aaCGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGCGGAATTATCTGTCCAGCCCCACGCTTTAAGCTGCGCGAGGGTCAAGCCACCACAGCCATTCCTCCAGCCGACAAGCAAACCCAACGCGAACAGTGCAAACATTTATAAATTCCCGCGGCAAACCgggagagagacacaccc                                                                                                                                                        >  2:991261/1‑224 (MQ=255)
                                                                                    cTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGGGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACcaca                                                                                                                                               <  1:1066074/239‑1 (MQ=255)
                                                                                       cgccctgTTTTTTCGCCGATGATGCCGCCCACCAGCGCACCGGGAAACATTCCGGCGGTCGTGATTGCTGAGAATGGGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATg                                                                                                                                            <  2:304803/233‑1 (MQ=255)
                                                                                        gACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAAAATTGATGAATGCCAGCGGCAATCCGGTAAGCGGTCCCGCCGTGCACCCCAATGc                                                                                                                                           >  1:829047/1‑239 (MQ=255)
                                                                                         cccGGTTTTGGCCCCAATGATGCCCCCCACCAGCGCCCCGAGAAACATTCCGGCGGTCGGGATTGCTGAGAATGTGGCTGTGGTGGAATTACCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCg                                                                                                                                          <  2:667764/238‑1 (MQ=255)
                                                                                           cgtttttGCCGCCTTTGATCCCCCCCCCCAGC‑CACCGACAAACATTCCGGCGGTCGTGATTGCCGAGAATGGGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGtt                                                                                                                                       <  2:378952/236‑1 (MQ=255)
                                                                                              ttttgttgccccttctgCCCCCCCCCGTCGCCCCGAGAAACATTCCGGCGGTCCTGATTGCTGAGAATGGGGCTGTGGTGGAATTAGCTGTCCAGCCCAACGCTTGCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACCCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGtttt                                                                                                                                     <  2:133520/224‑1 (MQ=255)
                                                                                               tttGGCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGGGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACCCCAGCAGACAAGCAAGCCAACCGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGtttt                                                                                                                                     <  1:253778/238‑1 (MQ=255)
                                                                                                           ggtgCCCCCCACCCGCGCCCCGGGAAACATGCCGGGGGTCGGGATTGGTGGAAATGGGGCTGTGGTGGAATTACCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCa                                                                                                                        <  2:1075867/237‑1 (MQ=255)
                                                                                                             tgCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAAACCGGTAAGCGATCCAGCCGTGCACCCCAATGCGGTTTTGTTATCTGTTCCAt                                                                                                                       >  1:34404/1‑238 (MQ=255)
                                                                                                                    caccaGCGCACCGAGCAACATTCCGGCCGTCGTGATGGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAAc                                                                                                               <  1:541846/239‑1 (MQ=255)
                                                                                                                      ccccccccccggaaaaCTTTCCGGCGGTCGTGATGTCTGAGAATGTGGCTGGGGTGGAATTATCGGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGt                                                                                                             <  2:957818/226‑1 (MQ=255)
                                                                                                                      ccaGCGCCCCGGAAAACTTTCCGGCGGTCGTGATTGCTGAGAGTGTGGCTGGTGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACCCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGt                                                                                                             <  2:1016142/239‑1 (MQ=255)
                                                                                                                          cgcACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCCAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATACGGTTTTGTTATCTGTTCCATGGGATAACGTTCCt                                                                                                         >  1:348023/1‑239 (MQ=255)
                                                                                                                            cACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGGGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCtt                                                                                                        <  1:1026576/238‑1 (MQ=255)
                                                                                                                             aCCGAGAAACATTCCGGCGGTCGTGATTGCTGGGAATGCGGCTGGGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCa                                                                                                      <  1:93914/239‑1 (MQ=255)
                                                                                                                                 agaAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATg                                                                                                                                            >  1:6978/1‑197 (MQ=255)
                                                                                                                                 agaAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATg                                                                                                                                            <  2:6978/197‑1 (MQ=255)
                                                                                                                                         tCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGGTGCGCGAGGATCAAGCCACCCACGGCATTACTCCAGCCGACAAGCAAACCAAACGCGACGAAGGCCAACATTTATGAATGCCCACGGCAATCCGGTAAGCGAACCACCCGTCAACCCCAATACGGTTTTGTTTACTTTTCCCTGCGACAACCTTCCTCCCGGAGAGAGGttt                                                                                          >  2:503989/1‑238 (MQ=255)
                                                                                                                                           cggcggTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGGGGTTAt                                                                                         >  1:522484/1‑238 (MQ=255)
                                                                                                                                               ggTCGTGATTGCTTGGAATGTGGGTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATtcatc                                                                                    <  2:522484/239‑1 (MQ=255)
                                                                                                                                                 ttgttagtGCTGAGAATGGGGCTGTGGTTGAATTATCTGTCCAGCCCAACGCATTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATtcatca                                                                                   <  1:976144/231‑1 (MQ=255)
                                                                                                                                                 tCGTGATTGGTGGGAAGGTGGCTGGGGGGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCAACAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATtcatca                                                                                   <  2:639058/238‑1 (MQ=255)
                                                                                                                                                 tCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATtcatca                                                                                   <  1:665552/238‑1 (MQ=255)
                                                                                                                                                 tCGGGATTGCTGAGAAGGTGGCTGTGGGGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATtcatca                                                                                   <  1:945403/238‑1 (MQ=255)
                                                                                                                                                  ctgggttGCTGAGAATTTGGCTGTGGTGGAATTAACTGTCCAACCCAACGCTTTCAGCTTCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCaa                                                                                  <  1:501558/233‑1 (MQ=255)
                                                                                                                                                        tggtGAGAATGTGGCTGTGGTGGAATTAACTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGt                                                                            <  1:423348/235‑1 (MQ=255)
                                                                                                                                                         gCTGAGTATTGGGCTGGGGTGGAATTCTCTGTCCCGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGTCATTACTCCCGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTaa                                                                          <  2:201299/239‑1 (MQ=255)
                                                                                                                                                          tgggaatggtgcttgtgGT‑GAATTATCTGTCCAGCCCAACCGTTTCAGCTGCGCGAGGATAAAGCCACCAACGGCATTACTCCAGCAGAAAAGCAAGCCAATCGGGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGt                                                                        <  2:1050156/226‑1 (MQ=255)
                                                                                                                                                             agaATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCAAGCGGCAATCCGGTAAGCGTTCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGCTAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTaaaccc                                                                      >  1:841352/1‑235 (MQ=255)
                                                                                                                                                                      cTGTGGAGGAATTTTCTGTCCAGCCCAACGGATTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACt                                                              <  1:503989/238‑1 (MQ=255)
                                                                                                                                                                       tgtgGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCAACACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTACGGGAAGTGGTAATTCATCAATATCGTCAGTCATGATCACttt                                                            >  1:1734/1‑239 (MQ=255)
                                                                                                                                                                         tggtggAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATAATCACTTTGa                                                          >  1:220858/1‑239 (MQ=255)
                                                                                                                                                                         tggtggAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGCCGTAAGCCATGATCACTTTGa                                                          >  1:891422/1‑239 (MQ=255)
                                                                                                                                                                             ggAATTATCTTTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACAGTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGGGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTg                                                       <  1:726292/238‑1 (MQ=255)
                                                                                                                                                                             ggAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCCCCAAAGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGAAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTg                                                       <  2:251532/238‑1 (MQ=255)
                                                                                                                                                                                 ttttcttcccAGCCCAACGCTTTCAGCTGCGCGGGGATCAACCCACCAACGGCATTCCTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGtt                                                  <  2:639408/231‑1 (MQ=255)
                                                                                                                                                                                      tGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACTTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATc                                             >  1:809848/1‑239 (MQ=255)
                                                                                                                                                                                        tCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAACCGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAATTCATGATCCCTTTGATTGCGGTTTTAttg                                            >  1:599809/1‑236 (MQ=255)
                                                                                                                                                                                        tCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCCGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGAACCCTTTGATTGCGGTTTTATCgc                                           >  2:482695/1‑238 (MQ=255)
                                                                                                                                                                                        tCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGGTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGCGTGGTTTTTGTTCAATGTCGTAAGTAAGGATACCTTTACTTTGGGTTTTATCg                                            >  2:10802/1‑238 (MQ=255)
                                                                                                                                                                                        acaggCCCAACGCTTTCAGCTGGCCGAGGATCAAGCCCCCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATc                                             <  1:1027785/233‑1 (MQ=255)
                                                                                                                                                                                         ccAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATCGGATAACGTTCCTTCAGGAGGGGGGGTATTCATCAAATCCGTAAGCAATGATCAATTTGATGGGGGTTTTATCAAc                                          >  2:1009685/1‑239 (MQ=255)
                                                                                                                                                                                            ccccAACCCTTTCAGGTGCGCGAGGATCAAGCCCCCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCAt                                       <  2:891422/238‑1 (MQ=255)
                                                                                                                                                                                             ccccccGCTTTCAGTTGCGCGAGGACTAAGCCACCAACGTCATGACCCCAGCAGGCAAGAAAGCCAAACGCGACTACTGCAAACATTGATGAATGCCAGGGGCAAGCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATc                                      <  2:666695/234‑1 (MQ=255)
                                                                                                                                                                                             cccaaccttttcagtggccgcgggATCAAGCCCCCAACGGAATTACACCCGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATc                                      <  2:628034/217‑1 (MQ=255)
                                                                                                                                                                                              ccAACCCTTTCCGCTGCCAGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATc                                      <  1:1009685/238‑1 (MQ=255)
                                                                                                                                                                                                  cGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGt                                                                        >  2:909117/1‑200 (MQ=255)
                                                                                                                                                                                                  cGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGt                                                                        <  1:909117/200‑1 (MQ=255)
                                                                                                                                                                                                  cGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGGGGTTATTCATAAAAGCAGTAAGTCATGACCCCTTTGATTGCGGGTTTATCGACCATCGCaac                                 >  2:605141/1‑237 (MQ=255)
                                                                                                                                                                                                      ttCAGGTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAAACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCaaa                              <  1:347961/238‑1 (MQ=255)
                                                                                                                                                                                                       tCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGGGAGTGGTTATTCATCAAAGCCGTAAGTCATGATCACTTTGTTTTCGGTTTTTTCTACCATCgactctgt                              >  2:1027785/1‑230 (MQ=255)
                                                                                                                                                                                                             gcgcGAGGATCAAGCCACCAACGGCATTACCCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTcgc                      <  1:453287/239‑1 (MQ=255)
                                                                                                                                                                                                              cgcgAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATAACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTcgc                      >  1:1035501/1‑238 (MQ=255)
                                                                                                                                                                                                              cgcgAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCAGGTACACTTTGATTGCGGTTTTATTGACCCTCGCCAAAAACCCTTccc                      >  2:347961/1‑236 (MQ=255)
                                                                                                                                                                                                               gcgAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGCGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCCTCAAACCCTTcccg                     >  1:673416/1‑238 (MQ=255)
                                                                                                                                                                                                                   ggATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCAt                 <  1:175037/238‑1 (MQ=255)
                                                                                                                                                                                                                       taaGCCACCAACGGCATTACCCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGa            <  1:633071/238‑1 (MQ=255)
                                                                                                                                                                                                                       cacgCCCCCACCGGCCTTTCTCCAGCAGACAAGCAAGCCAAACGCGACGAGGGCAAACATTGATGAATGCCCGCGGCAATCCGGTAAGCTATCCCGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGa            <  2:680964/236‑1 (MQ=255)
                                                                                                                                                                                                                       cAAGCCCACAACGGCATTACTCCAGAAGCCAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGa            <  1:955334/239‑1 (MQ=255)
                                                                                                                                                                                                                       cAAGCCACCAACGGCAGTCCTCCAGCAGACAAGCAAGCCAAACCCGACGATGGCAAACCTTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGa            <  1:940393/239‑1 (MQ=255)
                                                                                                                                                                                                                       cAACCCCCCAACGGCATTACCCCAGCAAACAAGCAAGCCAAACGCGGCGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGa            <  2:766565/239‑1 (MQ=255)
                                                                                                                                                                                                                         cgCCCCCATCGGTCTTACACAAGGAGACACACGAGCCAAGCGCGACTATGGAAAACAGGGATGAATGCCATTCGAAACCCGGTACGTGATCCGGCCGAACAACACAAGGCGGTTTTAATATCTGTTCCATGCGATAACGTTCCTTCAGGCGAGTTGTTAATCAACAAAGTCGTAAGTCATGATCATTTTGATTGCGGTTTTATCGACCAGCGCATCAAACCATTCGTGCCATTGCGACa          <  2:970546/238‑1 (MQ=255)
                                                                                                                                                                                                                               caACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGCTCACTTTGATTGCGGTTTTATCGCCCATCGCCTCAAAACCTTCGCGCCATTCCGACAGGCCGa    >  2:940393/1‑239 (MQ=255)
                                                                                                                                                                                                                               caACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTTCGACAGGCCGa    >  1:264982/1‑239 (MQ=255)
                                                                                                                                                                                                                               caACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGCCAGGCCgt    >  1:766565/1‑238 (MQ=255)
                                                                                                                                                                                                                               caACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGa    >  1:604356/1‑239 (MQ=255)
                                                                                                                                                                                                                                 aCGGCATTACCCCAGCAGACAAGCCAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATa  <  1:152407/239‑1 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                    
GCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGATTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGACAAGCAAGCCAAACGCGACGATGGCAAACATTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGCACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATA  >  NC_000913/1859883‑1860346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A