Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,976,691 T→C 12.9% E150G (GAG→GGG)  motA ← proton conductor component of flagella motor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,976,6910TC12.9% 197.2 / 3.6 85E150G (GAG→GGG) motAproton conductor component of flagella motor
Reads supporting (aligned to +/- strand):  ref base T (30/40);  new base C (4/8);  total (34/51)
Fisher's exact test for biased strand distribution p-value = 7.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTGACGTAAAACAGTCGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCCAGCAGATCCATATACATTGCT  >  NC_000913/1976453‑1976924
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                         
cTGACTAAAAACGGGCCCTAATGGGGAAATAAACCCGTAAGCCCACAAAATGCCGAAGAAAGCCCCCACCCACGCAT‑GTGCGATAAGCGCCCCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGCCCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAAtct                                                                                                                                                                                                                                           <  2:183351/239‑1 (MQ=255)
cTGACGTAAAACAGTCGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGGGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAAtct                                                                                                                                                                                                                                           <  2:173457/239‑1 (MQ=255)
     gTAAAACAGTTGGTAATTGGGAAATAAATCCGTAAGCAAATAAAAGGCCGAAGAAAGTCCCCACCATCGCAA‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCGAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTca                                                                                                                                                                                                                                      <  1:822005/239‑1 (MQ=255)
          aCAGTCGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGAGGAAAGCCCCCACCATCGCAT‑GGGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTcatccat                                                                                                                                                                                                                                 <  1:270800/239‑1 (MQ=255)
              tCGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATCCCAAACGCCGGACGTGAGTCCCCGACCACGGCCAGACCGTTCGCCGGGACTTCTGCCCCCCTTTCGGGCGGCCCAATCCCTTctcccccccaa                                                                                                                                                                                                                             >  2:1064254/1‑229 (MQ=255)
              tCGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCTTCaga                                                                                                                                                                                                                             >  1:791784/1‑239 (MQ=255)
              tCGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCCCTTCATCCATCata                                                                                                                                                                                                                             >  1:869467/1‑237 (MQ=255)
              tCGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGGGAGTCCCCGACCAGCGCCACACCGTTCGCCGGGCCTCCTGCCTCGCTTTCGTCCGCCCCCACCCCTTcatcccccaca                                                                                                                                                                                                                             >  2:162886/1‑233 (MQ=255)
               cGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTCCAGCCGCAACAATACCAAACGCCGGAAGTGGGGCCCCGACCAGCCCCGACCTGTTCCCCGGGACTTCTCCCCCCCTTTCCTGTGTCCCAAACCCTTctcccataaaca                                                                                                                                                                                                                            >  2:256974/1‑234 (MQ=255)
                           aataataCCGTAAGCCTAAAAAAGGCCGAGGAAAGTCCCCCCCATCGCAA‑GTGGCATAAGCGGACCCAGCCCGGCGGCAGGACGATCGGCTGAACCTAACGCGGGAACGCCCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGa                                                                                                                                                                                                                <  2:183392/239‑1 (MQ=255)
                           aataaatCCGTAAGCCAATAAAAGGGCGAGGAAAGGCCCCCCCAGCGTCT‑GGGCGATAAGCGCACCCAGGCCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGa                                                                                                                                                                                                                <  2:133118/239‑1 (MQ=255)
                            ataaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGACTCGCTTTCGTGCGGCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGaa                                                                                                                                                                                                               >  1:1050412/1‑239 (MQ=255)
                             taaatCCGTAAGCCAAAAAAATGCCGAAGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAg                                                                                                                                                                                                              <  1:656530/239‑1 (MQ=255)
                             taaaccctgaaGCCAATAAAATGCCGAGGAAAGTCCCCCCCATCGCAT‑GGGCGAAAAGCCCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGCCCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAg                                                                                                                                                                                                              <  2:791784/230‑1 (MQ=255)
                             taaacCCGTAAGCAAAAAAAAATCGGAGGAAAGTCCCCCCCATCGCAG‑GTGGGATAAGCGCACCCAGCTCGGGCGCAGGACGACCGGCAGAACCTACCGCGTGAACGCCCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAg                                                                                                                                                                                                              <  2:793684/239‑1 (MQ=255)
                                atCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACCGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCCCAATCTCTTCATCCTTCAGCGCTTCGATTTCGAAGgtg                                                                                                                                                                                                           >  1:1001015/1‑239 (MQ=255)
                                acccGTAAGCCAAAAAAAGGCCGAGGAAACTCCCCCCCATCGCAT‑GGGCGATAAGGGCCCCCAGCTCGGCGGCAGGACGAACGGCTGAACCTAACGCGTGAACGCCCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGgtg                                                                                                                                                                                                           <  2:1050412/237‑1 (MQ=255)
                                          cAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGAc                                                                                                                                                                                                 <  1:149888/239‑1 (MQ=255)
                                          cAAAAAAATGACGAGGAAAGTCCCCCCCCGCGCAG‑GGGCGAAAAGCGCCCCCACCCCGGCGGCAGGACGATCGGCGGAACCCACCGCGTGAACGACCCCCCGTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGGTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGAc                                                                                                                                                                                                 <  2:565518/239‑1 (MQ=255)
                                          cAAAAAAAAGCCGGGGAAAGTCCCCACCATCTGATGGTGC‑AAAAGCGCCCCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGGGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGCCTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGAc                                                                                                                                                                                                 <  2:726264/239‑1 (MQ=255)
                                            aTAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGGTTTCATTTGAcc                                                                                                                                                                                                >  1:576600/1‑238 (MQ=255)
                                                agcgCCGGGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCCCGGCGGCAGGACGACCGGATGAACCTAGCGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCGGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGa                                                                                                                                                                                           <  1:1064254/236‑1 (MQ=255)
                                                       aGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGCCTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCCCTGATAATCAg                                                                                                                                                                                    >  1:951344/1‑239 (MQ=255)
                                                        ggAAAGTCCCCCGCATCGCAA‑GTGCGAAAAGCGGACCCAGCTGGGAGGCAGGACGATCGGCTGAACCTAGCGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAg                                                                                                                                                                                    <  1:115762/238‑1 (MQ=255)
                                                         gaagggccccACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAgg                                                                                                                                                                                   <  1:917429/232‑1 (MQ=255)
                                                                   accaTCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCACTCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCCCCGATAATc                                                                                                                                                                        >  1:758915/1‑239 (MQ=255)
                                                                   accaTCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGGGTTCATGTGACCGCTGCTAATCAGGCGCAGATAATc                                                                                                                                                                        >  1:45936/1‑239 (MQ=255)
                                                                        cGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCTCTTTCGAAGGTGTTCATGTGACCGCTGGTAATCAGGCGCAGATAATcgacgc                                                                                                                                                                   >  1:1049661/1‑238 (MQ=255)
                                                                        cGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGCTTTCGAAGGGGTTCATGGGCCCGCTGATAACCAGGCGCAGATAATcgccga                                                                                                                                                                   >  2:444792/1‑239 (MQ=255)
                                                                          gcagtggCGATAAGCGCCCCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGGGTGAACGACCCCCATTACAGCCGCAACAATCCCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGAt                                                                                                                                                                  <  1:444792/233‑1 (MQ=255)
                                                                          ctcttgtccgaaaGCCCCCCCAGCTCGGCGCCAGGCCGATCGGTGTAACCCAACCCGTGACCGACCCCGATTACAGCCGCAACAATCCCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGAt                                                                                                                                                                  <  2:134289/228‑1 (MQ=255)
                                                                                gcgagacgctaccccAGCGCGGCGGCAGGACGATCGGATGAACCTAACGCGTGAACGACCCCCATTACAGCCGAAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATc                                                                                                                                                            <  1:655782/227‑1 (MQ=255)
                                                                                gCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCCACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGCTTTCGAAGGGGTTCATGTGACCGCTGATAATAAAGCGCAGATAATCGCGGAAAAAAta                                                                                                                                                            >  2:99381/1‑238 (MQ=255)
                                                                                ccatcaaGCCCCCCCAGCCCGGCGGCAGGACGACCGGCTGAACCTAACGCGTGACCGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATc                                                                                                                                                            <  2:919837/234‑1 (MQ=255)
                                                                                      aGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGCTAATCGACGATAAAATCAAGCAt                                                                                                                                                      >  1:607148/1‑239 (MQ=255)
                                                                                          gaCCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATGCCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACg                                                                                                                                                  <  1:403048/238‑1 (MQ=255)
                                                                                            cccACCCCGGGGGCCGGAGCACCGGCTGCACCTAAGGCGTGAACCACCCCCATTCCAGCCGCAAAAATGCCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCCCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCt                                                                                                                                                <  2:869467/239‑1 (MQ=255)
                                                                                                    ggggggcggcggagccgCTCAAACTACCGGGGGAACCCCCCCCATTCCAGCCCCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGa                                                                                                                                        <  2:607148/223‑1 (MQ=255)
                                                                                                    ggcggcAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGa                                                                                                                                        <  1:162886/239‑1 (MQ=255)
                                                                                                      cggcAGGACGATCGGCTAAACCGAACGGGTGAACGACCCCCATTACATCCGCAACAATACCAACCGCCGGAAGTGGGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAg                                                                                                                                       <  1:1081966/238‑1 (MQ=255)
                                                                                                        ttgttataagaaacaaaccccaaCGCGGGAACGACCCCGATTACGACCGCAACAATCCCAAACGCCGGAAGTGAGTCCCCGTCCAGCGCCAGACGGTTCGCCGGGACTTCGGCCTCGCTTTCGTGCGGCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAAACGACGATAAAATCAAGCATGACGCTATCCGCGAGGa                                                                                                                                     <  2:369373/217‑1 (MQ=255)
                                                                                                        gcAGGACGATCGGCTAAACCTAACGCTGGAACGACCCACATTACAGCCGCAACAATACCAAACGGCGGAAGTGAGTCCCCGGCCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGa                                                                                                                                     <  1:675317/238‑1 (MQ=255)
                                                                                                                gtCGGCTTACCCCACCCCGGGAACCACCCCCATTCCCGCCGAAACAATCCCAAACGCCGGAAGGGAGTCCCCGACCAGCGCCAGGCTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCGCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGt                                                                                                                            <  2:870335/238‑1 (MQ=255)
                                                                                                                                  gTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGGGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCAGAACGTTATCCGCAGGGATGCGTGGGTAGCTGGCGAAGCTATCg                                                                                                           >  1:991703/1‑238 (MQ=255)
                                                                                                                                   tGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACAGCTGCTAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGAGGCTATCCGCGGGGATGCGCGGGTAGCTgaccctaatacaca                                                                                                          >  1:369373/1‑225 (MQ=255)
                                                                                                                                   ggAACGCCCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGGGGCCCCGACCAGCGCCATGCTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGct                                                                                                         <  2:758915/238‑1 (MQ=255)
                                                                                                                                    gAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCGTCCATCAGAGCTTCGATTTCGAAGGCGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGCAGCTGGCGAAGATCTCGct                                                                                                         >  1:160571/1‑238 (MQ=255)
                                                                                                                                     aaCGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGCGACCGCTGATAATCAGGCGCAGATAATCGACGTAAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGctc                                                                                                        >  1:1056808/1‑238 (MQ=255)
                                                                                                                                       ccccccccATTCCACCCCCTACTATTCCAGACGCCGCGTGTGGTGCCCCGACCCGTGCCAGACTGTTCGCCGTGCCTTCTTCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCAGCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCa                                                                                                     <  2:633304/236‑1 (MQ=255)
                                                                                                                                          cccccATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTAACCGCGAGGATGCGGGGGAAGCGGGCGaaaaacccgccccaacgg                                                                                                  >  2:1040651/1‑223 (MQ=255)
                                                                                                                                                 tACCGCCCCAACAATCCCAAACGCCGGAAGTGAGTCCCCGACCAGGGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGAtttt                                                                                           <  2:991703/239‑1 (MQ=255)
                                                                                                                                                    aGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCCCGAGGATGCGTGGGTAGCGGGCGAAGATTCCCCTCCCCCGGGGATTTTCaa                                                                                        >  2:768743/1‑239 (MQ=255)
                                                                                                                                                      ccGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGGGAAGATCTCGCCCTCACGGGGATTTTCaaa                                                                                       >  2:537379/1‑237 (MQ=255)
                                                                                                                                                      ccGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAAACTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCAGGGATGCGTGGGTAGCTGGCGAAGATCTGTctcttataaacacatccgag                                                                                       >  1:314258/1‑222 (MQ=255)
                                                                                                                                                        ccacaaaTCCCAAACGCCGGAAGGGGGCCCCCGACCAGCGCCAGGCTGTGCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCCCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATc                                                                                    <  2:756528/234‑1 (MQ=255)
                                                                                                                                                         caacaaTACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATc                                                                                    >  1:793033/1‑238 (MQ=255)
                                                                                                                                                          aacaaTCCCAAAGCCCGGAAGTGCGTCCCCGCCCAGGGCCAGACTGGTCGCCGGGACTTCTGCCCCGCTTTCGTGCGTCTCAATCTCTGCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATc                                                                                    <  2:98529/237‑1 (MQ=255)
                                                                                                                                                                    aaCGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGc                                                                          >  1:98529/1‑237 (MQ=255)
                                                                                                                                                                    aaCGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGc                                                                          >  1:756528/1‑237 (MQ=255)
                                                                                                                                                                    aaCGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATCCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGa                                                                        >  1:1027016/1‑239 (MQ=255)
                                                                                                                                                                       gCCGGAAGTGAGTCCCCGACCGGCGCCAGACTGTTCGCCGGGACTTCGGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCAGCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGaaaa                                                                     <  1:424272/239‑1 (MQ=255)
                                                                                                                                                                           gAAGTGGGTCCCCGGCCAGCGCCAGCCTTTTCGCCGGGACTTCTGCCCCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATc                                                                 <  2:953905/239‑1 (MQ=255)
                                                                                                                                                                                             gcgcCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCCTGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATACCACTTTCCGGCGAAAAAATCCCCAtttccaccgtttt                                                >  2:813371/1‑226 (MQ=255)
                                                                                                                                                                                             gcgcCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCCCCACCGGGGATTTTCATTATCACGTTCCAGCGAAAAAATCCCCATCTACCGCGATTTc                                               >  2:474789/1‑239 (MQ=255)
                                                                                                                                                                                              cgcCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGAGGCGTGGGTAGCTGGGGAAGATCTCGCTCTAACGGGGATTTTCAAAATAAGGTTCCAGCGAAAAAATACCAACCTGCCGCGATTTc                                               >  2:497836/1‑238 (MQ=255)
                                                                                                                                                                                               gccctgcttttgcccGGGCCTTCTCCCTCCGTTTGGTGCGTCCTAATCCCTTCATCCATCAGAGCTTCGATTCCGAAGGTGTTCAGGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGAttt                                                <  2:576600/223‑1 (MQ=255)
                                                                                                                                                                                                    gcctttCGCCGGTTCTTTCTCCTCCCTTTCGTGCGTCTCAATCTCTTCATCCATCAGGGTTTCGAGTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAAGCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATTTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCa                                        <  2:425305/235‑1 (MQ=255)
                                                                                                                                                                                                     cttttCGCCGGGACTTCTGCCTCGCTTTCGGGCGTCCCAATCCCTTCATCCCTCAGAGCTTGGATTTCGAAGGTGTTCATGGGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCa                                        <  2:793033/235‑1 (MQ=255)
                                                                                                                                                                                                     cttttCGCCGGGACTTCTGCCTCGCTTGTGGGCCTCTCAATCCCTTAATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGGGCCCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCa                                        <  1:474789/235‑1 (MQ=255)
                                                                                                                                                                                                        ttCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCCCGGGGATTTTCAATATCCCGTTCCAGCGAAAACATCCCCATCTTCCCCGTTTTTCCCACCAACCg                                    >  2:882177/1‑239 (MQ=255)
                                                                                                                                                                                                        ttCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGAGGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCg                                    >  1:90843/1‑239 (MQ=255)
                                                                                                                                                                                                          cGCCGGGCCTTTTGCTGTGCTTTCGTTGGTCTCAATCCCTTAATCCGACAGAGCTTAGTGTTCGAAGGTGGTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGAt                                  <  2:160571/239‑1 (MQ=255)
                                                                                                                                                                                                               ttaaaggaagttccgtttCGTTCGGCTCAATTTCTTCACCCATAAGGGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGc                             <  2:700812/224‑1 (MQ=255)
                                                                                                                                                                                                                       tccccggtttccggcctcccAATCGCTTCATCCATCAGAGCTTCGATTTCGAAGGTTTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcag                     <  1:99381/220‑1 (MQ=255)
                                                                                                                                                                                                                         cctgttttctggCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGGGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcagca                   <  2:1049661/228‑1 (MQ=255)
                                                                                                                                                                                                                         cccggcttCGTGGGTCACAATCCCTTCATCCCACAGGGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcagca                   <  1:918220/233‑1 (MQ=255)
                                                                                                                                                                                                                         cacGCTTTCGGGCGTCTCAATCGCTTCAACCAACAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcagca                   <  1:882177/237‑1 (MQ=255)
                                                                                                                                                                                                                         cTCGGTTTCGTGCCGCTCAATCCCTTCATCCAACAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcagca                   <  1:486136/239‑1 (MQ=255)
                                                                                                                                                                                                                         cTCGCTTTCGTGCGTCTCAATCTCATCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcagca                   <  1:768743/239‑1 (MQ=255)
                                                                                                                                                                                                                         cTCGCTTTCGGTCGTCTCAATCTCTTCATCCATCAGGGCTTTGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcagca                   <  2:1001015/239‑1 (MQ=255)
                                                                                                                                                                                                                         cTCGCATTCGGTCGTCTCAATCTCTTCATCCATCGATGCTTCGATGTCGAAGGTGTTCATGTGCGCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcagca                   <  1:584983/239‑1 (MQ=255)
                                                                                                                                                                                                                          tctgtttCGGGCGTCCCAATCCCTTCATCCAACAGGGCTTCGATTTCGAAGGTGTTCATGGGCCCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGGTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCcagca                   <  1:19466/234‑1 (MQ=255)
                                                                                                                                                                                                                           cGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCTATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCCAGCAGa                 <  1:497836/239‑1 (MQ=255)
                                                                                                                                                                                                                                     cGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGccacca                   >  1:700812/1‑227 (MQ=255)
                                                                                                                                                                                                                                      gtttccaTCTCTTCATCCATCAGAGCTTGGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCCAGCAGATCCATATACa       <  2:45936/232‑1 (MQ=255)
                                                                                                                                                                                                                                       tctcAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAAAATCCCCACCTGCCGCGATTTCTCCATCAACCGATAAAGCAACGCCAGCCCATCCCTATACAt      >  1:481162/1‑238 (MQ=255)
                                                                                                                                                                                                                                          cAATCTCTTCATCCATACGAGCTTCGATTTCGAAGGTTTTCATGTGACCGCTGATAAACAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCCAGCAGATCCATATACATTGCt  <  1:468733/239‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                         
CTGACGTAAAACAGTCGCTAATGGGGAAATAAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCAT‑GTGCGATAAGCGCACCCAGCTCGGCGGCAGGACGATCGGCTGAACCTAACGCGTGAACGACCCCCATTACAGCCGCAACAATACCAAACGCCGGAAGTGAGTCCCCGACCAGCGCCAGACTGTTCGCCGGGACTTCTGCCTCGCTTTCGTGCGTCTCAATCTCTTCATCCATCAGAGCTTCGATTTCGAAGGTGTTCATGTGACCGCTGATAATCAGGCGCAGATAATCGACGATAAAATCAAGCATGACGCTATCCGCGAGGATGCGTGGGTAGCTGGCGAAGATCTCGCTCTCACGGGGATTTTCAATATCACGTTCCAGCGAAAACATCCCCATCTGCCGCGATTTCGCCATCAACCGATAAAGCAGAGCCAGCAGATCCATATACATTGCT  >  NC_000913/1976453‑1976924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A