Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,171,546 |
G→A |
12.9% |
pseudogene (182/299 nt) |
gatR ← |
pseudogene, repressor for gat operon, interrupted by IS3, split galactitol utilization operon repressor, fragment 2, split galactitol utilization operon repressor, interrupted |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,171,546 | 0 | G | A | 12.9%
| 218.4
/ 2.0
| 85 | pseudogene (182/299 nt) | gatR | pseudogene, repressor for gat operon, interrupted by IS3, split galactitol utilization operon repressor, fragment 2, split galactitol utilization operon repressor, interrupted |
| Reads supporting (aligned to +/- strand): ref base G (52/19); new base A (5/7); total (58/27) |
| Fisher's exact test for biased strand distribution p-value = 4.31e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
TATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGG > NC_000913/2171311‑2171780
|
tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTTGAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGG‑GGGTAGGGTCAATCATCCCTTCGTGGATCATTTTTACTGCCGCCTGCGCGATTTTGTTTTTTTGCGGGCT‑GGCGGGC‑TGAAAT‑CGCCCTTTAAA‑ACCGCCTTCCTGGGGCTC‑GGTTTTCATTTTACCAAAC‑a > 2:354939/1‑239 (MQ=18)
tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTTACTGCCGCCTGCGCTATTCTGTTTTTTTGCGCGCT‑GGCGGGC‑TTAAAT‑CGCCCTTTAAA‑ACCGACTTCCTGGGGCTC‑GGGTTCACCATTACCAAAC‑a > 1:557800/1‑239 (MQ=21)
tCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGCCTTCCTGGGTCTC‑GGTTTCCATATTCCCAGAC‑ctt > 1:754247/1‑239 (MQ=255)
aaTGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGGTCATTTTTACTTCCGCCTGCGCCATTCTGTTTTTTTGCCCGCT‑GGCGAGC‑TGAAAT‑CGCCCTTTAAA‑CCCCACTTCCTGGGGCCC‑GGTTTCCCTATTAACAAAC‑aata‑tt > 2:747162/1‑239 (MQ=21)
aaTGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGG‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGCGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTTACCATTACCAGAC‑attt‑tt > 1:1045416/1‑239 (MQ=255)
tgtgATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCCTGGATCATTTTTACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCC‑GGCGGGC‑TGAAAT‑CGCTCTTTAAA‑CCCCACTTCCTGGGTCTC‑GGTTTCACCATTACCAGAC‑ATAA‑tttt > 2:879832/1‑239 (MQ=255)
tgtgATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAAAACCTCGCTTAGGCCTGTGTCCCTATTACGT‑GGGTAGGAACAGTCATCCCTTCGTGGGTCATTTTTACTGCCGCCCGCGCTTTTTTGTTTTTTTTCGCGCG‑TGCGGGC‑GGAAATCCCCTCTTTAAA‑‑CCGGCTTCCTTGGTCCC‑GGGTTTACCTTTTCCCAAC‑AATA‑tttt > 2:671929/1‑239 (MQ=17)
tgtgATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGACTTAGACCGGAACAATTTGAAAACAAGAACCCTCCTTAAGCCTGTGTCCCAAATAACT‑GGGTAGGGTCAGCGATCCCTTCGTGGGTCCTTTTGAATGCCACACGGGCTATTTTGTTTTTTGGCCGGCC‑GG‑GCGCGTGCACA‑TGCGCCTTGAA‑CCCGACTTCCCGGGGTCC‑GGTTTCCCTATTTCAAAAC‑ATTA‑attt > 2:969784/1‑239 (MQ=9)
cAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAACAACCTCGCTTAGGGCTGTGTCCATATTACGG‑GGGGAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTTTTTTTTTTTGCGCGCT‑GTGGGGC‑TGCAAT‑AGCTCTTTTAA‑ACCGCCTTTCTGGGGTCC‑GGGTTTACCATTACCAGAA‑AATA‑TTTTTGCCTCa > 2:505195/1‑238 (MQ=18)
cAAGCGGTGGCGGCGGCACAGTTGGTGTGGGGGCCTAAGTCCGGAACAATTTGAAACCAAGACCCTCGGTTGGGCTTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCAc < 1:844108/239‑1 (MQ=38)
acaGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGGTCAGTCATCCCTTCGTGGATCATTTTGACTGCCCCCTGCGCTCTTCTGTTTTTTTGCGCGCT‑GGCGAGC‑TGAAAT‑CGCCCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCCCTATTACCACAC‑CTTATTTTTTGCCCCCCCCCCATGAAAGcgcga > 2:214399/1‑238 (MQ=25)
gcggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGGTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCCCCGCCATGAAAGCGCGTAA‑CCACGCCtttt > 1:465890/1‑239 (MQ=255)
gTCCGGAACATTTTGAAAACGAGATCCTCGTTTGGGCTGGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTGGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCgaga < 1:100663/239‑1 (MQ=255)
ccGGAAAAATTTGAAAACAAGAACCTCGTTTAGGCCTGTGTCCATATTACGG‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAC‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCgaga < 1:671929/237‑1 (MQ=255)
gAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAgcg > 1:178562/1‑239 (MQ=255)
aaCAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTGCGG‑GGGTAGGATCATTCACCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAgcg < 1:730496/238‑1 (MQ=255)
tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTaa > 1:620902/1‑208 (MQ=255)
tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCCCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTTTAGAAAACGCAAATc > 2:238051/1‑239 (MQ=255)
aaaaaaAGACCCCCGGTTGGGTCT‑TGTCCCTTTTTCGTGGGGTGGGATCAGTCATCCCTTCGGGGTGTATTTTGCCTGCCGCCTGCGCTTTTCTGTTTTTTGGGGCGTG‑GGCGAGC‑TGAAAC‑CGCTCTTTAAA‑CCCCGCTTCCTGGGTCTC‑GGTTTCACTATTACCAGCC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCa < 2:742286/239‑1 (MQ=255)
aaaCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCAc > 1:322893/1‑239 (MQ=255)
gAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCCCTATTACCAGAC‑ATTA‑TTTTAGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGCGAAAGCGCAAATCGGCACGGCTTg > 1:248427/1‑239 (MQ=255)
gCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTTTTCGAGAAAGCGCAAATCGGCCCGGATTGTAGCTTc > 2:153788/1‑239 (MQ=255)
gCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCtt > 1:57460/1‑238 (MQ=255)
cTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTcc > 1:627846/1‑239 (MQ=255)
atatTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCCAATAc > 1:350105/1‑238 (MQ=255)
atatTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATAc > 1:789906/1‑238 (MQ=255)
aCGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAgcgc > 1:646064/1‑165 (MQ=255)
aCGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGCGGCAGCAAATACTCCCg > 1:281094/1‑238 (MQ=255)
aCGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCCTTTTGTTCGAGAAAGCGCAAATCGGAACGGATTGACCCTTCCAAGGCAGCAAATACTCCCGc > 1:150097/1‑239 (MQ=255)
cGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCa > 2:15596/1‑203 (MQ=255)
cGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCa < 1:15596/203‑1 (MQ=255)
cGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGcc > 1:780329/1‑239 (MQ=255)
gT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTCCCAGAC‑ATTA‑TTTTCTCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGccc > 1:221138/1‑238 (MQ=255)
gT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCCGCAAAAACCCCCGcaa > 2:827983/1‑237 (MQ=255)
ggTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGa > 1:812371/1‑238 (MQ=255)
ggTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGa > 1:384829/1‑238 (MQ=255)
gTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCCCGGATTTTCGCTTCCTAGGCAGAAAAAACCCCCCCCAAAt > 2:81320/1‑238 (MQ=255)
gTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATAATCCCACCAGag > 2:177795/1‑237 (MQ=255)
gTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCCCTTCCGAGGCAGCAAAAACTCCCCCCaaac > 2:357405/1‑235 (MQ=255)
ggATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGGGGCAGCAAAAACTCCCCCCAAACCCTg > 2:1033342/1‑239 (MQ=255)
gATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGa > 1:949536/1‑239 (MQ=255)
gATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CAACGCCTTTTTGTTCTAGAAAGCGCAAATCGGCACGGATTTTCCCTTCCGAGGCAGCAAAAACCCCCGCCAGATCCGGa > 2:241004/1‑239 (MQ=255)
ctcctcTTCGTGGTTCTTTTTCTCTCCCCCCTGCGTTTTTTTTTTTTTGGGCG‑GCTGGGGGAGC‑TGAAAT‑CGCTCTTTAAC‑CCGGACTTCCGGGGTCTC‑GTTTCCACTATTCCCAGAC‑TTTA‑TTTCCCCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCa < 2:1045416/234‑1 (MQ=255)
gcccTTGGGGTATCATTTGGACTGCCGCCTGGGCTTTTCTGTTTTTTGGCGCGCT‑GGCGATC‑CAAAAT‑CGCTCTTTAAC‑CCCGCCTTCCTGGGTCCC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACg < 1:750815/238‑1 (MQ=255)
cccttgcgggtatattttgGACCGCCGCCTGCGCTTTTCTGTTTTTTGGCGCGCT‑GGCGAGG‑TGAAAT‑CCCTCTTTAAC‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACg < 1:586664/224‑1 (MQ=255)
cccTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAAATCCTCAACAAACACgg > 2:814887/1‑239 (MQ=255)
ctttCGTGGATCATTTTGACTGCCGCCTGCGTTTTCCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCCCTTTAAC‑CCCGACTTCCTGGGTCCC‑GGTTTCACTTTTCCCAGAC‑ATTA‑TTTTCCCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGt < 1:1033342/237‑1 (MQ=255)
ccTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTTTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGACGCAAAAACTCCCGCCaaaacccaaaaaagaaagg > 2:518422/1‑220 (MQ=255)
tCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGCTTGTCCCTTCCGGGGCAGCAAATACTCCCGCCAGTCCCTGacaacaaacgggtc > 2:651965/1‑225 (MQ=255)
tCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACCCCCGCCAAACCCTGAACAAGACCGGTTc > 2:586664/1‑238 (MQ=255)
cGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTc > 1:777111/1‑237 (MQ=255)
gTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAAAACTCCCCCCAGATCCCGAAAAAGAACGGTTcccc > 2:109740/1‑238 (MQ=255)
aTCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCGGCAAATACTCCCGCCAGATCCTGAACAACCACGGTTCCCTGtta > 1:1085816/1‑238 (MQ=255)
aTCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGttc > 1:106057/1‑239 (MQ=255)
aTCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAACCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCCCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGACCGGTTCCCTGttc > 1:511678/1‑239 (MQ=255)
cATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGttcat > 1:263054/1‑239 (MQ=255)
tttttGCCTCCCCCCTGTTCTTTTTTTTTTTTTGGCGGTCT‑GGAGAGC‑TAAAAT‑CGC‑CTTTAAACCCCGCCTTCCGGGGTCTG‑GTTTCCCCTTTTCCCAAAC‑TTTA‑TTTCCGCCGCCCCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGttcatt < 2:557800/238‑1 (MQ=255)
cccctgctttttttttttttttGGCGCGCT‑GGCGAGC‑TAAACT‑CGCTTTTAAAC‑CCCGCCTTCCGGGGTTCC‑GGTTCCACTTTTCCCAAAC‑TTTA‑TTTCCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGga < 2:384829/223‑1 (MQ=255)
ccccTGCCCTTTTCGGTTTTTTGGCGCGCT‑GGGAAGC‑TGAAAT‑CGCTTTTAAAA‑CCCGACTTCCTGGGTCTG‑GGTTTCATTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGga < 1:879832/237‑1 (MQ=255)
ccctgggtttttgtGTTTTTTGGGCGGCTGGGCGATC‑GAAAAC‑CCCTTTTAACA‑CCCG‑CTTCCCTGGGCTCGGGTTTCATTTTTCCCGAAC‑TTTT‑TTTCCGCCGCCCCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGga < 2:106057/226‑1 (MQ=255)
cccTGCGCTATTTTGTTTTTTGGCGCTCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCGGGGTCTC‑GTTTTCACTATTACCAGAC‑ATTA‑TTTCCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGgat < 1:238051/238‑1 (MQ=255)
cgtttttttGGCGGGCT‑GGCGAGC‑TAAAAT‑CGCTTTTTAAC‑CCGGATTTCCTGGTTCTG‑GGTTCCATTTTTACCAGAC‑ATTT‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCt < 1:638134/236‑1 (MQ=255)
ttttttGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATa > 1:116590/1‑172 (MQ=255)
tttGGCGCGCT‑GGCGAGC‑TGCAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCCCTCATTGGATGACCTTATTCCTTTGCTc > 1:573647/1‑239 (MQ=255)
tGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATa > 1:728105/1‑167 (MQ=255)
tGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCCGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCga > 1:236241/1‑239 (MQ=255)
aggtcgAAAT‑CGCTCTTTAAC‑CCCGCCTCCCGGGGTCCG‑GGTTTCCCTATTCCCAGAC‑ATTG‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAAGCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCCGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATc < 1:109740/233‑1 (MQ=255)
aGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGAAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGt > 1:97227/1‑239 (MQ=255)
tGAAAT‑CCCTTTTTAAA‑CCCCACTGCCGGGGTTTG‑GGTTTCCCTTTTCCCAAAC‑ATTT‑TTTTCGCCCCCCCGGCATGAAAGCGCGTAA‑CCCCGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGt < 2:780329/236‑1 (MQ=255)
aaaatcccctttaaaaccgcgtctCCCGGGTTCC‑GTTTTCAATATTACCGGCC‑GTTT‑TTTTCGCCGCCCCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCAtt < 1:153788/216‑1 (MQ=255)
ct‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCGAAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGGCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTAc < 1:745331/238‑1 (MQ=255)
accgttctTTAAA‑CCCGACTTCCGGGGTCGC‑GTTTTCCCTATTACCAGAC‑ATTA‑TTTTCGCCCCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTAc < 1:814887/234‑1 (MQ=255)
cGCTTTTTAAC‑CCCGTCTCCCGGGGTCTC‑GTTTTCCCT‑TTTCCAGTCAATTT‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTAccc < 1:518422/239‑1 (MQ=255)
tctTAAAA‑CCCGGTCTCCGGGGCCCC‑GTTTTCACTTTTCCAAGCA‑ATTT‑TTTCCCCCACACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCata < 1:958015/239‑1 (MQ=255)
tAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTAATTCCTTCGCCCGAATGAATCAATCGTCATTTACCCAAATTCa > 2:859284/1‑239 (MQ=255)
aCTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATtttg > 1:839012/1‑237 (MQ=255)
tc‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGa > 1:622470/1‑239 (MQ=255)
cACTATTCCCAACC‑TTTA‑TTTCCCCCGCCCCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGa < 1:272832/239‑1 (MQ=255)
aCTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCCCCCGAATGAATTCATCGCCCTTTACCCATATTCAATTTTGGCTAGGTTAAAAAAAGGGGGAc > 2:309193/1‑239 (MQ=255)
ttttACCACAC‑TTTA‑TTTCCCCCGCTCCGCCATGAAAG‑GCGTAATCCACGCCTTTTTGGTCGAAAAAGCGCAAATCGGCACGGATTTGCGTTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCa < 1:651965/237‑1 (MQ=255)
tATTCCCAAAC‑TTTT‑TTTGCCCCCCCCCGCCATGAAAGCGCGTAA‑CCCCGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCa < 2:977558/239‑1 (MQ=255)
ttACCAGAC‑TTTA‑TTGCCGCCACACCGCCATGAAAGTGCGTAA‑CCCCGCCTTTTTGTTCGAGAAAGCGCAAACCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCAtt < 1:519070/239‑1 (MQ=255)
aCCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCCCTAATTGGATAATCTTATTCCTTCGCTCGAATGAATTCATCGTCCTTTACCCATATTCACTTGTGGCTAGAGAAAACGAAaggggcacatggg > 2:338424/1‑231 (MQ=255)
aCCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAAtt > 1:290858/1‑208 (MQ=255)
aCCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTTTGGCTAGTGTAAACGAAGGGGGACCATTgg > 1:977558/1‑239 (MQ=255)
gAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCga > 1:727971/1‑172 (MQ=255)
|
TATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGT‑GGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCT‑GGCGAGC‑TGAAAT‑CGCTCTTTAAA‑CCCGACTTCCTGGGTCTC‑GGTTTCACTATTACCAGAC‑ATTA‑TTTTCGCCGCACCGCCATGAAAGCGCGTAA‑CCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGG > NC_000913/2171311‑2171780
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
