Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,489,850 A→C 12.7% V72G (GTG→GGG)  yjgR ← DUF853 family protein with NTPase fold

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,489,8500AC12.7% 264.5 / 4.4 127V72G (GTG→GGG) yjgRDUF853 family protein with NTPase fold
Reads supporting (aligned to +/- strand):  ref base A (60/43);  new base C (4/20);  total (64/63)
Fisher's exact test for biased strand distribution p-value = 2.37e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 131 total aligned reads displayed.

AAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTG  >  NC_000913/4489612‑4490085
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                           
aaggTCGAGCAGTACCCGCCCCGGATCGTCAGCAATGCGGAAGATG‑ATATCCAGCCCGCCAGGTTGCACATCGTGGGGATTCAACAGTCGTGGCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGaca                                                                                                                                                                                                                                             <  2:235587/236‑1 (MQ=255)
      gAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCCCACCACCACCGGATTGCCATGCGGTTGCCAGTCCTTGAGCCCGATATTTTTAAGCCTTCCGACCGGTTTTTCCGACCCCGtt                                                                                                                                                                                                                                        >  1:345634/1‑238 (MQ=255)
       aGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCCCACCACCACCGGATTGGCATGCGGTTGCCAGTCATTAACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGtt                                                                                                                                                                                                                                        >  1:855414/1‑237 (MQ=255)
       aGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCCCCACCGGATTGGCAGGCGGTTGCCAGTCCTTGACGCCGAATTTTTTAAGCCTTGCGGGCAGTTTTTCCGACAcc                                                                                                                                                                                                                                           >  2:688929/1‑234 (MQ=255)
       aGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGCTTGCCAGGCATTGAACCCCATCTTTTTAACCCTTCCGAGCAGGTTTTCCGACAACGTTc                                                                                                                                                                                                                                       >  1:1001036/1‑238 (MQ=255)
             aaCAGCCCCTGATCGTCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTcctgc                                                                                                                                                                                                                                   <  1:5000/236‑1 (MQ=255)
               cacccccttgtcggtggCAATGCGG‑AGAGGTATATTCATCGCGACAGAGTGCACATCGTTGAAATTAAACAGTGGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTgcg                                                                                                                                                                                                                              <  2:560616/223‑1 (MQ=255)
                  ccccTGATCGTCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGACCAGTTTTTCCGACACCGTTCCTGCCTGcgcg                                                                                                                                                                                                                            >  1:752905/1‑238 (MQ=255)
                            tCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCCTGCGGGTGCCAGTAATTGCCGCCGAAATTTTTAAGCCTTGCGAGCAGGTTTTCCGACACCGTTCCTACCTGGGCGAAGCGGGtaaa                                                                                                                                                                                                                 >  2:103747/1‑236 (MQ=255)
                            tCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGGGCAGTTTTTCCCGAACCGTTCCGGCCTGCCCGGCGCCGGtaca                                                                                                                                                                                                                 >  2:1003117/1‑236 (MQ=255)
                            tCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAg                                                                                                                                                                                                                 >  1:765434/1‑239 (MQ=255)
                            tCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGGCGTGCCAGCAACAGCGGCCCCCGATCCGAAACCGTCGCCCGCACCGGGTGGCCGTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCGTGCGGTTGCCCATCATTCTCGCCCCACTTTTAAAGCCTTCCGGGCCGATTTTCCGCCACCCTCCCGGCCCTCGCGACGCCggagc                                                                                                                                                                                                                  >  2:673458/1‑235 (MQ=255)
                              aGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAACGGTCCTTCCCTcgcgcccgcgggcaaat                                                                                                                                                                                                               >  2:536918/1‑226 (MQ=255)
                              aGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGAACTTTTTAACCCTTGCGAGCAGTTTTTCCGACACCCTTCCTGCCTGCGCGACGCCggcccaa                                                                                                                                                                                                                >  2:222988/1‑233 (MQ=255)
                                cattGCGGAAGATG‑ATTTTCAGCACGCCAGATTGCCAATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCg                                                                                                                                                                                                             <  2:874851/236‑1 (MQ=255)
                                   tGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCt                                                                                                                                                                                                          <  1:95571/239‑1 (MQ=255)
                                    gCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACCGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCtt                                                                                                                                                                                                         <  1:1064690/239‑1 (MQ=255)
                                     cGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGAAGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGAAACCGTTCCTGCCTGCGCGACGCCGGCCAGATCGCCtt                                                                                                                                                                                                         >  1:640162/1‑238 (MQ=255)
                                      ggAAGATT‑ATATTCAGCACGCCAAATTGGACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCttt                                                                                                                                                                                                        <  1:536918/238‑1 (MQ=255)
                                      ggAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGGCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGGCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCttt                                                                                                                                                                                                        <  1:586856/238‑1 (MQ=255)
                                            tg‑atATTCACCCCCCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTGTCTCGCCAAAGATATCCCACCCCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACAt                                                                                                                                                                                                   <  2:722087/237‑1 (MQ=255)
                                            tg‑atATCCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACAt                                                                                                                                                                                                   <  1:193016/237‑1 (MQ=255)
                                             tgtttttCAGCACGCCAGATTTCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACAt                                                                                                                                                                                                   <  2:715155/232‑1 (MQ=255)
                                             taatatTCAGCCCGCCAGATTGCACATCGTTGGAATTCAACAGTCGGGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGATGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACAt                                                                                                                                                                                                   <  1:687939/235‑1 (MQ=255)
                                             g‑atATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGCTTGGCATGCGGTTGCCAGTCATTGACGCCGAAATTTTTAAGCCTTGCGCGCCGTTTTTCCGACACCGTTCCTGCCTGCCCGACGCCGGTCAGACCCCCTTTcacaacc                                                                                                                                                                                                 >  2:992383/1‑235 (MQ=255)
                                                      gCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCCGCCTTCGCGCCGCCGGGCAGATCGCCTTTCACATCAGCCAaaaa                                                                                                                                                                                         >  2:483630/1‑238 (MQ=255)
                                                      gCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATCCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGCCACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCCTaaa                                                                                                                                                                                         >  1:461800/1‑238 (MQ=255)
                                                       cACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCGACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCCGTTTTTCCGACACCGTTCCTGCCTGCGCGAGCCCGGTCAGATCGCCTTTCACATCAACCAaaaaa                                                                                                                                                                                        >  2:888871/1‑237 (MQ=255)
                                                          gCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCCCACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCATGCCTGCGCGCCGCCGGTCAGATAGCCTTTCACATCTGCCATACACCCCg                                                                                                                                                                                    >  1:196741/1‑239 (MQ=255)
                                                          gCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGCCGCCGGTCAGATCGCCTTTCACATCAGCCATAAACAcc                                                                                                                                                                                     >  1:708020/1‑238 (MQ=255)
                                                          gCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCAAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAAcccc                                                                                                                                                                                     >  1:2788/1‑238 (MQ=255)
                                                                ttGCCCATCGTTGAGATTCAACGGTCGGCCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGc                                                                                                                                                                              <  1:428195/239‑1 (MQ=255)
                                                                 tGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGCCACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCATCCATAAACACCGGCAcccc                                                                                                                                                                             >  1:814984/1‑239 (MQ=255)
                                                                    acaTCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTcctgc                                                                                                                                                                                                                                   <  1:60815/182‑1 (MQ=255)
                                                                    acaTCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTcctgc                                                                                                                                                                                                                                   >  2:60815/1‑182 (MQ=255)
                                                                      aTCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTTCGGGCAGTTTTTCCGACAACGTTCCTGCCTGCGCGACCCCGGTCAGATCGCCTTTCACATCAGCCATAAAAACAGGAACGGCGAtt                                                                                                                                                                         >  2:323930/1‑238 (MQ=255)
                                                                        cGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGAGATTTTTAAGCCTTGCTAGCATTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCCAATCGCCTTTCACATCAGCCCTAAACACCCGCACGCCGGTATcc                                                                                                                                                                      >  2:817556/1‑239 (MQ=255)
                                                                            gaagaggcagggTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCCCCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACa                                                                                                                                                                  <  1:364913/228‑1 (MQ=255)
                                                                             agaTTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGCTGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGGTTTCCGACaa                                                                                                                                                                 >  2:848160/1‑239 (MQ=255)
                                                                                  cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGCAAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGCCAATGAc                                                                                                                                                             >  1:993727/1‑238 (MQ=255)
                                                                                     cttgcgtgcacgccccAGCGACCCCAACCCCGAACCCGTCCCCCGCTCCGGATGGCCGTTCTCCGCAAAGATATCCCACACCCACACCGGTTTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGACCCGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCg                                                                                                                                                         <  2:981411/224‑1 (MQ=255)
                                                                                     ccgTCGGGCCAGCAACAGCGGCCCCAGATCCAAAACCGTCGCCCGCCACGGATGGCCTTTCCCGCCAAAGATACCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCg                                                                                                                                                         <  2:153893/237‑1 (MQ=255)
                                                                                     cccgcGTGCCAGCAACCGCGGCCCCAGATCCGAACCCCGCACCCGCCCCGGGTGGCCGTTCCCGCCAAAGATATCCCACACCTCCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCg                                                                                                                                                         <  2:323780/235‑1 (MQ=255)
                                                                                          gTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCCCATCAGCCATAAACACCGGCACCCCGATTTCCGACAATGACTCCGccc                                                                                                                                                      >  1:1000473/1‑236 (MQ=255)
                                                                                          gTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCCCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAAAACCGGCCCCCCGATTCCCGAAAAAAACACCCCCAGt                                                                                                                                                    >  2:363435/1‑239 (MQ=255)
                                                                                           tGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGtt                                                                                                                                                   >  1:564673/1‑239 (MQ=255)
                                                                                             ccAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACCTCAGCCCTAAACACCGGCCCCCCGATTTCCGACAATGACCCCCCCCGtttt                                                                                                                                                 >  2:67271/1‑239 (MQ=255)
                                                                                                     gccgcccccAG‑TCCGAACCCCTCGCCCCCCTCTGATTCCCTTTCCCCCCAAAAATTACCCCCCCCCCCCCCGGATTGGCAGGCGGTTGCCATGCATTGACGCCGATAGTTTTAACCCTTGCGAGCCTTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTa                                                                                                                                        <  2:117724/234‑1 (MQ=255)
                                                                                                       cgcccccgcttccgcacccccccccccCACCGGATGGCCTTTCTCGCAAAAGATACCCCCCACCCCCCCCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTaa                                                                                                                                       <  2:533530/216‑1 (MQ=255)
                                                                                                                   cGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAACCTTGCAAGCAGTTTTTCCGACACGGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAGCACCGGCACGCCGATTTCCGAAAATGACTCCGCCACTTTTTTCACGGTAACCGTTTTAccc                                                                                                                            >  1:978605/1‑238 (MQ=255)
                                                                                                                    gcacccgccgCCCCCCCCGGGTGTCCTTTCCCGCCAAAACTACCCCCAACCCCCCCCGGTTTGGCATGCGTTTGCCAGTCATTGACGCCAATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGt                                                                                                                          <  2:609926/235‑1 (MQ=255)
                                                                                                                     aaaCCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCCCATCAGCCATAAACACCGGCACGCCCCTTTCCGCCCATGACCCCCCCAGTTTTTTCCACGTACCGTTTTTACCCgc                                                                                                                          >  2:1050271/1‑237 (MQ=255)
                                                                                                                            gccccccccctggtGGCCTTTCCCGCCAAGATTCGCCCACACCCCCGCGGGTTTGGCCTGCGGTTGCCATGTATTGACGCCGGTATTTTTAAGCGTTGCGGGCAGTTTTTCCGACCCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTg                                                                                                                  <  2:862969/226‑1 (MQ=255)
                                                                                                                             gCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCCTAAACACCCGCCCGCCGCTTTCCGACAATGCCTCCCCCAGTTTTTTCACCGTAACGGTTTTACCCCACCCCGttc                                                                                                                  >  2:7973/1‑237 (MQ=255)
                                                                                                                              cccGCACCGGATGGCCTTTCTCGCCAAAGATACCCCCCCCCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTgcg                                                                                                                <  1:546556/239‑1 (MQ=255)
                                                                                                                                   aCCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACAGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTCCGCCgga                                                                                                           >  1:733802/1‑238 (MQ=255)
                                                                                                                                      ggATGGCCTTTCTCGCCAAAGATTTCCCACCCCACCTCCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAAt                                                                                                        <  1:323930/239‑1 (MQ=255)
                                                                                                                                      ggAGGGCCTTTCCCCCCAAAGATACCCCACCCCACCCCCGGATTGGCATGGTGTTGCCAGTCATTGACGCCGATAGTTTTAAGCCTTGCGAGCAGTTTTCCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAAt                                                                                                        <  2:561295/239‑1 (MQ=255)
                                                                                                                                             cTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCCCATCCGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCCCCGGGAATAAGCCCa                                                                                                 >  2:1039838/1‑239 (MQ=255)
                                                                                                                                              tttCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTGGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACCCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCAt                                                                                                <  1:234754/239‑1 (MQ=255)
                                                                                                                                               ttCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATg                                                                                               >  1:143496/1‑239 (MQ=255)
                                                                                                                                               ttCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGAAGCCGATCTTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACCCCGCTTTCCGCCAATGACTCCGCAAGTTTTTGCACCGGACCGGTTTTACCCGTCCCCGTTGCGCCGGTAATCACCCCagg                                                                                               >  2:790312/1‑237 (MQ=255)
                                                                                                                                                       aaatgtcccccccccccccacgGGATTGGCCTGCGGTTGCAAGTCATTTGCGCCGATTTTTCTAACCCTTGGGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAg                                                                                       <  2:1000473/222‑1 (MQ=255)
                                                                                                                                                                ccACACCACCCCCGGATTGGCATGCGGTTGCCAGGCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCg                                                                              <  1:121711/239‑1 (MQ=255)
                                                                                                                                                                   cacccccacCGGATTGGCATGCGGTTGCCAGTCCTTGACCCCGATATTTGTAACCCTGGCGAGCATTTTTGCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCa                                                                           <  1:363435/239‑1 (MQ=255)
                                                                                                                                                                    accaccaccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGCCGGTTAGCCATTCCCGGCAg                                                                          >  1:186340/1‑239 (MQ=255)
                                                                                                                                                                    accaccaccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGGTTTTGCAGCGTCACGGTTTTACCCTTCCCCGTTGCGCCCGGAAAAAGCCCATGACGGGTAGCCAATCCCGGcgg                                                                          >  2:390611/1‑237 (MQ=255)
                                                                                                                                                                         caccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGCCTCCGCCAGTTTTTTCAGCGTAACGGCTTTACCCGTCCCCGGTGCCCCGGAAATCAGCCCATGACGGGTAGGCATTCCCGCCAGTaaaa                                                                     >  2:35389/1‑239 (MQ=255)
                                                                                                                                                                          caggggtttggaTGGGGTTGCCCGTCATTGACCCCGATATTTTTAACCCTTGCGAGCAGTTGTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTaaaaa                                                                    <  2:501779/228‑1 (MQ=255)
                                                                                                                                                                                        cGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGCCCCCGTTGCGCCGGTAATCAGCCCATGACGGCTAGCCATTCCCGGCAGTAAAAACAGTTCtgtg                                                          >  1:501779/1‑235 (MQ=255)
                                                                                                                                                                                         ggTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCACCGGTACTCACCCCATTACGGTTAGCCATTCCCGGCCGCAAAAACAATACTGGGTCCgc                                                     >  2:43783/1‑238 (MQ=255)
                                                                                                                                                                                             gCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTcc                                                                                                                                                                      >  1:1008645/1‑122 (MQ=255)
                                                                                                                                                                                             gCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGCCTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAACCAGCCCATGCCGGTAAGCCATTCCCGGCAGTAAAAAAAGTTTTGTTTCCGGCggg                                                 >  2:207801/1‑237 (MQ=255)
                                                                                                                                                                                             gCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCCGTAAAAACAATTCTGGTTCCGGGGTg                                                 >  2:639508/1‑239 (MQ=255)
                                                                                                                                                                                             gCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCCTCCCCGTTGCGCCGGCAATCAGCCCATGACGGTAAGCCATTCCCGCCCGTAAAAAAAATTCTGTTTCCggaggg                                                 >  2:598436/1‑235 (MQ=255)
                                                                                                                                                                                              ccAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCCGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGc                                                <  1:1003117/239‑1 (MQ=255)
                                                                                                                                                                                               cAGTCATTAGCGCCCATTTTTTCAAGCCTTGCGAGCAGTTTTTCCGACCCCGTCCCTGCCTGCGGCACGCCGGTCAGAGCGCCTTTCACATCAGCCATACACACCGGCCCGCCGATTTCCGACAAGGGCTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGTCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCg                                               <  2:697679/239‑1 (MQ=255)
                                                                                                                                                                                                 ctcttttccccccatttttttAACCCTTGGGAACTGTTTTTCCGCACCCGTCCCTGCCCGCGGGACGCCGGTCAGACCCCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCggg                                             <  2:143496/223‑1 (MQ=255)
                                                                                                                                                                                                           ccGATTTTTTTAGGCCTTCCGACCTGTTTTTCCGCACCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAACCACCGGCCCGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAg                                   <  2:988082/239‑1 (MQ=255)
                                                                                                                                                                                                            cGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAgg                                  >  1:914444/1‑239 (MQ=255)
                                                                                                                                                                                                               tatTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGt                               <  1:220794/239‑1 (MQ=255)
                                                                                                                                                                                                                cgtttttccctttGCGCGCCTTTTTTCCGACCCCCTTCCTGCCTGCGGGCCGCCGGTCATATCGCCTTTCCCCTCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGtt                              <  2:308126/228‑1 (MQ=255)
                                                                                                                                                                                                                atTTTTAAGCCTTTGCAGCAGTTTTCCCGACCCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCCGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGtt                              <  1:1039838/239‑1 (MQ=255)
                                                                                                                                                                                                                 tttttAGTCCTGGCCGGCTGTTTTTCCCACCCCGTTCCCGCCGGGGCGGCGCCGGTCAGACCGCCTTTCACATCAGCCATAAGCACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGtt                              <  2:374493/238‑1 (MQ=255)
                                                                                                                                                                                                                  ttttAAGCCTTGCGAGCGGTTTTTCCGCCACCGTTCCTGCCTGCGCGACGCCGTGCAGATCGCCTTTCACATCAGCCATAAACCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCa                            <  1:615440/239‑1 (MQ=255)
                                                                                                                                                                                                                  ttttAAGCCTTGCGAGAACTTTTCCCGACCCCGTTCCTGGCTGCGCGACGCCGGTACGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCa                            <  1:1050271/239‑1 (MQ=255)
                                                                                                                                                                                                                       aGCCTTGCGAGCAGTTTGTCCGACCCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCAt                       <  1:450335/239‑1 (MQ=255)
                                                                                                                                                                                                                       aGCCTTGCGACAATTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCAt                       <  1:973030/239‑1 (MQ=255)
                                                                                                                                                                                                                          cttggcatctttttttCCGCCCCGTTTCCCGCCCGCGGCACGGCGTGCAGATCGCTTTTCCCATCTGCCATAAACACCGGACCGCCGATTCCCGACAATGTCTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATgag                    <  2:354111/228‑1 (MQ=255)
                                                                                                                                                                                                                          cTTGCGAGCAGTTTTCCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATgag                    <  1:117085/239‑1 (MQ=255)
                                                                                                                                                                                                                           ttGGGAGCATTTTTCCCACCCCCGTTCCTGCCTCCGCGCCCCCGGCCAGATCGCCTTTCCCCTCGGCCATAAACCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATgaga                   <  2:765434/239‑1 (MQ=255)
                                                                                                                                                                                                                           aaaagaccgttttttCCGCCCCCCTTCCTGCCTGGGCGACCCCGGTCAGGTCGCCTTTCCCAACAGCCATAACCCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATgaga                   <  2:834660/229‑1 (MQ=255)
                                                                                                                                                                                                                            tGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACCCATgag                    >  1:374493/1‑237 (MQ=255)
                                                                                                                                                                                                                            tGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGGGCGGGCAATTAACAGGGGTTCACTCATGAGat                  >  1:681585/1‑239 (MQ=255)
                                                                                                                                                                                                                            tGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAAAAGTTTTTTTGCCGCCGTCGTGGCAATTAAAAAGGGTTCAccaaatagaa                  >  2:142830/1‑230 (MQ=255)
                                                                                                                                                                                                                             gCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACCCATaag                    >  1:308126/1‑236 (MQ=255)
                                                                                                                                                                                                                             gCGACCAGTTTTTCCGACCCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGata                 <  1:222988/239‑1 (MQ=255)
                                                                                                                                                                                                                             cggAGCGGTTTTTCCCCCACCGTTCCGCCCCGCGCGCCCCCGGTCAGATCCCCTTTCCCACCAGCCATAACCCCCGGCCCGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGata                 <  2:564673/237‑1 (MQ=255)
                                                                                                                                                                                                                                               acCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCCCTCCTGAGATATCCTCCAg         >  1:834660/1‑229 (MQ=255)
                                                                                                                                                                                                                                               acCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTcctg  >  1:528110/1‑236 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                           
AAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATG‑ATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTG  >  NC_000913/4489612‑4490085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A