Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F17 I0 R1 160 98.0 2214160 89.0% 1970602 222.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,065,745 A→G 10.6% E54G (GAG→GGG)  agp → glucose‑1‑phosphatase/inositol phosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,065,7450AG10.6% 235.0 / 2.9 87E54G (GAG→GGG) agpglucose‑1‑phosphatase/inositol phosphatase
Reads supporting (aligned to +/- strand):  ref base A (34/40);  new base G (9/2);  total (44/43)
Fisher's exact test for biased strand distribution p-value = 4.88e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTTGCGAACCTGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGA  >  NC_000913/1065508‑1065982
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                               
tttGCGAACCTGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGGTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGGGCTCATGATGAGCCGCCATAACTTACGCGCGCCGCCGGCGGACAATGGCCGGGGGCTGGAg                                                                                                                                                                                                                                                >  1:258269/1‑239 (MQ=255)
          tGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCCCTGGCGAAAAAAGGCAGGGTGCTGGGGCA‑GTCGACg                                                                                                                                                                                                                                      >  1:132164/1‑238 (MQ=255)
                      taattcttttttctttcACCCTTTTTTGTGATTAAT‑ACAAAAAGGGGGCCCAGAAAACACCAAACCC‑TAAACGGCCCGAGCTGTGGCAGGGATAGTTTAAC‑TCCTTTCAAACCC‑ACATGCAAAAACCGTACCGGAAGGCTATCAGCTAAGGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGc                                                                                                                                                                                                                         <  2:267868/230‑1 (MQ=255)
                       tcgagtggttaaaagaaaaagttttAGTGATTGATAAAAAAAGGGGTGCCAGAAAGAAACAAAACGC‑TAACC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAACCCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGc                                                                                                                                                                                                                         <  2:119398/216‑1 (MQ=255)
                                    gTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCCGGCGGAAAATGGCCGTGGGATGGGGCA‑GGCGACGCCGAATAAATGGCCAGAATGGGACGt                                                                                                                                                                                                            >  1:510879/1‑238 (MQ=255)
                                             tttAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGgggg                                                                                                                                                                                                   >  1:80436/1‑238 (MQ=255)
                                                   ggttgaaAAAAAAAGGGGTGCCAGGAAGAAAAAAACCGC‑TAACC‑GCCGCACGTGGGGCAGGG‑TAGTTTTACGCCGCGTAAACAGA‑CCAGGCCAAAACCTCACCGAAGGGCAACCGGCACAAGCATGTCCTCAGGAGGGGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTc                                                                                                                                                                                            <  2:246822/237‑1 (MQ=255)
                                                    ttttaaaaaaaaagggggtgcAGGGATGAAAAAAACGCATACTC‑GCGCGAGTGGTGGAGGGTATGTTTTTAC‑GCGCTTCAAACCT‑GCGGGCACAAACGGTCCGGAAAGGCTATCGGCAAAAGCAAGTGCTATGGATGGGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTAGGCAACTc                                                                                                                                                                                            <  2:242532/219‑1 (MQ=255)
                                                     ttgatAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGGGGGCTGGAGCA‑GTCGCCGCCGAATAAATGGCCCAAATGGGACGGCCCCGGTGGGCacatcc                                                                                                                                                                                           >  1:246822/1‑233 (MQ=255)
                                                     ttgatAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCCGGCGAACAATGGCAGTGTGCTGGGGCA‑GTCGACCCCGAAAAAAAGGCCAAAAAGGGACGGTCCCGGGGGGCaaacccc                                                                                                                                                                                          >  2:918785/1‑234 (MQ=255)
                                                       gatAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCCGAATGGGa                                                                                                                                                                                                               >  1:119398/1‑216 (MQ=255)
                                                       gatAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTcacc                                                                                                                                                                                         >  1:9118/1‑238 (MQ=255)
                                                       gatAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAA‑TCGCTTCAAACGG‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCCTAACTTACGTGCGCCGCCGGCGAACAAAGGCAAGGTGCGGGGGCA‑GTCGACCCCGAAAAAATGGGCAGAAAGGGGAAGCCCCGGGGGGGAACCcaca                                                                                                                                                                                         >  2:982017/1‑237 (MQ=255)
                                                               aaGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑CCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCCCTGTCGAACAATGGCAGTGGGCTGGGGCA‑GTCGCAGCCGAGAAAATGGCCAGAATGGGGCGTCCCCGGTGGGGGACCCACCACCaaaaag                                                                                                                                                                                >  2:1038450/1‑236 (MQ=255)
                                                                    ggcccAGGAATGAAAAAAACCA‑TAACC‑GCCGCAGGTGGGGCAGGGATAGTTTTAC‑CCGCTTCAAACGC‑TCAGGCAAAAACCGTCCCGGAAGGCTAGCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCg                                                                                                                                                                            <  1:602368/235‑1 (MQ=255)
                                                                    gTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTTTCAGCCACCACAAGTGCTCATGATGAGCCGCCATAACTTACGGGCGCCGCTGGCGAACAATGGCAGTGTGCTGGGGCA‑GGCCACGCCCAACAAAATGCCCAAATGGGACGGCCCCGGGGGGGAAATCACCCCCCAAAGGGGCGt                                                                                                                                                                           >  2:978658/1‑239 (MQ=255)
                                                                    gTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGGGGGCTGGGGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGGGGGCAACTCACCACCAAAGGGGGCg                                                                                                                                                                            >  1:355334/1‑238 (MQ=255)
                                                                       ccAGAAATAAACAAACCGA‑TAACC‑CCCGCAGGTGTGGCAGGGATATTTTTAC‑TCGTTTCAAACGC‑TCGGGTACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCt                                                                                                                                                                        <  1:283744/239‑1 (MQ=255)
                                                                         aGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGCATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCCCCACCAAAGGTGGCGTGCTCg                                                                                                                                                                      >  1:1002912/1‑239 (MQ=255)
                                                                           gAATGAACAAAACGC‑TACTC‑GCCGCAGCTGTGGCAGGGGTAGTTTTAC‑TCGCTTCCCACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCAGAAATTACGGACCCCCCCGGCGGACAATGGCGTGGCGCTGG‑GCACATCGACCCCCAATAAAAGGCCAGCATGGGGGGAGCCCAGGGTGCAACACAACACCCAAGgcggcgacgtagaa                                                                                                                                                                    >  2:239240/1‑231 (MQ=255)
                                                                            aaggAACAAAACCG‑TAACC‑GCCGCGTGTGTGGCAGGGATATTTTTCC‑TCGTCTAAAACGC‑TAAGGCACAAACCGTCCGGGAAGGCTAACAGCTAACGCAAGGGCTAAGGATGAGCCGCCAGAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGa‑a                                                                                                                                                                   <  2:80436/235‑1 (MQ=255)
                                                                            aagaaaCAAACCGC‑TAAGC‑GCCGCAGCTGGGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑CCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGa‑a                                                                                                                                                                   <  1:836742/234‑1 (MQ=255)
                                                                            aacaaaCAAACCGC‑TAACC‑GCCGCAGTTGTGGCAGGGATATTTTTCC‑TCGCTCAAACCGC‑TCAGACACAACCCGAACCGGAAGGCTTTCAGCTACAGAAGGTGCTCAGGAGGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg                                                                                                                                                                      <  2:247400/232‑1 (MQ=255)
                                                                            aaagAACAAAACGC‑TAAAC‑ACCTCAGCTGTGGCAGGGAAAGTTTTAC‑TCGCTTCAAACCC‑CAGGGCAAAAACCGTTCCGGAAGTCTATCAGCTACGGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGa‑a                                                                                                                                                                   <  1:388736/235‑1 (MQ=255)
                                                                            aaTGAACAAACCCT‑AAACC‑CCCGCAGTTGTGGCAGGGATAGTTTTCC‑CCGCTTCAAACCC‑TCAGGCAAAAACCGTACCGGAAGGCTATAAGCTAAAGCAAGTGCTAATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg                                                                                                                                                                      <  1:982017/236‑1 (MQ=255)
                                                                            aaTGAACAAAACGC‑TAACC‑GCCGCAGCTGTGGCAGTGATAGTTTTAC‑GCGGTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGAAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg                                                                                                                                                                      <  1:872143/236‑1 (MQ=255)
                                                                            aaTGAACAAAACGC‑TAACC‑CCCGCGGCTGGGGCAGGGATAGTTTTAC‑TCCCTACAACCGC‑TCAGGCACAACCCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGCGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGa                                                                                                                                                                     <  1:112799/237‑1 (MQ=255)
                                                                             aatcaaaacaccgtcaaac‑gccgcAGCGGGGGCGGGGATTGTTTGAC‑‑CGCCTCCAACCCGTCAGGCAAAAACCGTCCCGGAAGGCTATGAGCTACACCAAGTGCTCATGGTGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATTGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg                                                                                                                                                                      <  2:258269/218‑1 (MQ=255)
                                                                             aaacaaaaaacctctacac‑gcggcAGTGGTGGGAGGGATAGTTTTCC‑CCGCGACAACGGC‑TGAGGCCAAACCCGGCCCGGAAGGTTACCAGCTACAGAAAGTGCTCAGGAGGGGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg                                                                                                                                                                      <  2:132164/218‑1 (MQ=255)
                                                                                aaCAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCCGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGta                                                                                                                                                              >  1:960229/1‑239 (MQ=255)
                                                                                 aCAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCCAAAGTGGCGGGCTCGA‑AGTGgat                                                                                                                                                             >  1:247400/1‑239 (MQ=255)
                                                                                  cAAACCGC‑TAATC‑GCCGCAGCTGGGGCAGGGATAGTTTTAC‑TCGCTTCAACGTC‑CAAGGCACAAACCGTCCCGGAAGGCTACCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGtata                                                                                                                                                            <  1:1038450/239‑1 (MQ=255)
                                                                                     aaCGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGGGTatattg                                                                                                                                                         >  1:652399/1‑237 (MQ=255)
                                                                                         cgctaacgcgggcgacggtgggggggATATTTTGCC‑CCGCTCCAACCCG‑TAAGGCAAAAACCGCACAGGAAGGCTATCAGCTACAGAAAGTGTGCAGGAGGGGCCGCCATAACTTAGGTGCGGCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGc                                                                                                                                                       <  2:960229/216‑1 (MQ=255)
                                                                                             aTC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGGGGCGTGCTCGA‑AGGGTATATGGGCCCTTa                                                                                                                                                  >  1:422052/1‑239 (MQ=255)
                                                                                                   cgcAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGGGCA‑GTCGACGCCGAATAAATGGCCAGAACGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGGGCTCGA‑AGGGGATATTGGGCATTACACGc                                                                                                                                             >  1:552579/1‑239 (MQ=255)
                                                                                                             gCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGGGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGGGAAtg                                                                                                                                      >  1:1035588/1‑236 (MQ=255)
                                                                                                                       ttttAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGGGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAg                                                                                                                         >  1:1016643/1‑239 (MQ=255)
                                                                                                                       ttttAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATAAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGGGCA‑GTCGACGCCGAATAAATGGCCCAAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGGGGCGGGCTCGA‑AGGGGATATGGGGAATTACAAGCGGGAATGGCTGGCAgaggag                                                                                                                         >  2:417109/1‑239 (MQ=255)
                                                                                                                            c‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGGGAATGCCTGGCCGAGCAGGGGAt                                                                                                                    >  1:702428/1‑239 (MQ=255)
                                                                                                                                             cAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACCTGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGa                                                                                                     >  1:732873/1‑239 (MQ=255)
                                                                                                                                                  aaaacccggccgggAAGGCTAGCGGCCACAGCAGGTGCTCAGGAGGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGGGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGcc                                                                                                <  1:918785/227‑1 (MQ=255)
                                                                                                                                                      aCCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTggg                                                                                                                                                                                                  <  1:378008/138‑1 (MQ=255)
                                                                                                                                                      aCCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTggg                                                                                                                                                                                                  >  2:378008/1‑138 (MQ=255)
                                                                                                                                                      aCCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCGGAGCAGGGGATggctgtctcttataaccatctcc                                                                                             >  1:318926/1‑217 (MQ=255)
                                                                                                                                                        cGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGGGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCccgccg                                                                                           >  1:1072806/1‑238 (MQ=255)
                                                                                                                                                          tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGTACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGAATCTGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGGGAAACCgggg                                                                                                       >  1:75980/1‑224 (MQ=255)
                                                                                                                                                          tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACg                                                                                                                                                                                                                                      >  2:1042031/1‑98 (MQ=255)
                                                                                                                                                          tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACg                                                                                                                                                                                                                                      <  1:1042031/98‑1 (MQ=255)
                                                                                                                                                          tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCccgccgccg                                                                                        >  1:919673/1‑239 (MQ=255)
                                                                                                                                                          tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGAGGGTGAAATCGGGGGAATGCccgccgccg                                                                                        >  1:1084594/1‑239 (MQ=255)
                                                                                                                                                          tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGGGAATGGCTGGCAGAGCAGGGGATGGGGAAATCGGGGGAATGCccgccgccg                                                                                        >  1:770338/1‑239 (MQ=255)
                                                                                                                                                             gggatggatcgcAGCTACATGAAGCACTCATGGAGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGGGTGCTGGAGCA‑GGCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCTCCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTac                                                                                     <  1:581815/228‑1 (MQ=255)
                                                                                                                                                                  ggCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGGATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGGACACCGt                                                                                >  1:498220/1‑239 (MQ=255)
                                                                                                                                                                      aTCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGAGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGCTGGCGTGCTCGA‑AGTGTATATGGGCCCTTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGGGAAATCGGGGGAATGCCCGCCGCCCTACACCGTTta                                                                             >  1:315552/1‑238 (MQ=255)
                                                                                                                                                                       tCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGGAGTCCCCGGTGGGCAACTCACCACCAAAGGGGCCGTGCCTGAGGGTGT‑TTTGGGCCATTAAAGCCGGGAATGGCTGGCACAGCAGGGGGAGGGGAAAACGGGGGAATGCCCCGCCCCGGACACCGTTtat                                                                            >  2:545856/1‑238 (MQ=255)
                                                                                                                                                                       tCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGTCCGCCCCCGTAAACCGTTtat                                                                            >  1:523868/1‑238 (MQ=255)
                                                                                                                                                                         ctcataggtgtgttgtgcggtgaaGCCCCGATATCTTACGTGCGCCGCTGGTGAACAATGGCTGTGTGCTGGAGCA‑GTCGACGTCGAATAAAGGGCCAGAATGGGATGTCGCCGGTGGGCAACTCACCACAAAAGTTGGCGTCCTCGA‑AGTGGATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTtatgcc                                                                         <  2:661357/216‑1 (MQ=255)
                                                                                                                                                                            tACAGCAAGTTCTAGTGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTtatgcc                                                                         <  1:580403/236‑1 (MQ=255)
                                                                                                                                                                              cAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGGGCTCGA‑AGTGCATATGGGCCATTACATGCGCGAATGGCTGGCAGGGCAGGGGGTGGGGAAATCGGGGGAAGGGCCGCCGCCGGACACCGTTattgccctgcc                                                                    >  2:261390/1‑234 (MQ=255)
                                                                                                                                                                               aGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTatat                                                                                                                                                           <  2:631462/151‑1 (MQ=255)
                                                                                                                                                                               aGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTatat                                                                                                                                                           >  1:631462/1‑151 (MQ=255)
                                                                                                                                                                                 actgtcctctgtagggcccgccATAACTTACGGGCGCCGCTGGCGACCAAGGGCAGTGTGCTGGAGCA‑GTCGCCGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGGGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCaa                                                                 <  2:1016643/222‑1 (MQ=255)
                                                                                                                                                                                  aggTGCTCATGAGGGGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCa                                                                  <  1:164742/235‑1 (MQ=255)
                                                                                                                                                                                    ccgtcattggggggccgccATAACTTACGGGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGGATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAAt                                                                <  1:718293/224‑1 (MQ=255)
                                                                                                                                                                                      cctctgggggacccgccATAACTTACGTGCGCCGCTGGCGAAAAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTc                                                            <  1:239240/227‑1 (MQ=255)
                                                                                                                                                                                       ctaatggtgGGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTc                                                            <  1:978658/235‑1 (MQ=255)
                                                                                                                                                                                          taagggacgggccATAACTTCCGGGCGCCGCTGGGGAACAAGGGCGGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCa                                                        <  2:402259/229‑1 (MQ=255)
                                                                                                                                                                                                             tcggggcgcCGCTGGGGAAAAATGGCAGTGGGCTGGGCCA‑GTGGACGCCGAATAAAGGGCCAGAATGGGACGTCCAGGGTGGGCACCCCCCCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca                                     <  2:844225/234‑1 (MQ=255)
                                                                                                                                                                                                             tACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca                                     <  1:379714/239‑1 (MQ=255)
                                                                                                                                                                                                             tACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca                                     <  1:526871/239‑1 (MQ=255)
                                                                                                                                                                                                              gcGTGCGCCGTTGGCGAACAGTGGCGGTGGGCTGGAGCA‑GGCGGCGCCGAAAAAAGGCCCAGAAGGGGACGTCCCCGGTGGGCAACCCACCACCAAAGGTGGCGTGCTGGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca                                     <  2:498220/237‑1 (MQ=255)
                                                                                                                                                                                                               cGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGtt                                              >  1:402259/1‑228 (MQ=255)
                                                                                                                                                                                                               cGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGGGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGCCTGCAACGTACCGTTGCGGCCGccca                                   >  1:573835/1‑239 (MQ=255)
                                                                                                                                                                                                                   cgccgcTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAAAAGTCTGCAACGAACCGTTGCGACCGCCCAGt                                 >  1:158253/1‑237 (MQ=255)
                                                                                                                                                                                                                   cgccgcTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTAAACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCCCACAGt                                 >  1:922252/1‑237 (MQ=255)
                                                                                                                                                                                                                   cgccgcTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGACAAGGGGATGGTGAAATCGGGGGACTGCCCGCCGCCGTACCCCGCTTATGCCTATGCCAATAGTCCGCAACGCACCGTTGCCACCCCACAAttt                               >  2:696019/1‑238 (MQ=255)
                                                                                                                                                                                                                                cAATGGCAGTGTGTGTGAGCA‑GTCGAGGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGgcg                  <  1:359181/239‑1 (MQ=255)
                                                                                                                                                                                                                                cAATGGCAGTGTGCTGGGGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGgcg                  <  1:417109/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tgtgCTGGAGCG‑GTCGACGCCGAAAAAATGGCCAGAATGGGACGCCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑GGTGTAAATGGGCCCTTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCg          <  2:158253/238‑1 (MQ=255)
                                                                                                                                                                                                                                          gtgggggAGCA‑GGCGCCGCCGAATAAAGGGCCGGAATGGGACGTCCCCGGGGGGCAACTCCCCACCAAAGGGGGCGTGCTCGA‑AGTGTATATGGGCCATTACAGGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCggg        <  2:592954/234‑1 (MQ=255)
                                                                                                                                                                                                                                          gtgCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCccg                                                                                              <  2:415679/153‑1 (MQ=255)
                                                                                                                                                                                                                                          gtgCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCccg                                                                                              >  1:415679/1‑153 (MQ=255)
                                                                                                                                                                                                                                           ggCTGGAGGG‑GTCGACGCCAAATAAAGGGCCAGAAGGGGACGTCCCCGGGGGGCACACCCCCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTCCATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCgggg       <  2:1035588/238‑1 (MQ=255)
                                                                                                                                                                                                                                           ggCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCgggg       <  1:173940/238‑1 (MQ=255)
                                                                                                                                                                                                                                            gcgggAGCA‑GGCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCgggg       <  1:696019/235‑1 (MQ=255)
                                                                                                                                                                                                                                             cTGGCGCA‑GTCCACCCCGAATAAAGGGCCAGAAGGGTGCGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGgtg     <  2:1003608/239‑1 (MQ=255)
                                                                                                                                                                                                                                                 aGCA‑GTCGACGCCGAAGAAATGGGCAGAATGGGGCGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGGGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGa  <  1:517484/238‑1 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                               
TTTGCGAACCTGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGC‑TAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGC‑TCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGA  >  NC_000913/1065508‑1065982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A