Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I0 R1 92 125.0 2504412 98.2% 2459332 226.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 825,230 C→A 16.3% M293I (ATG→ATT)  ybhR ← putative ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913825,2300CA16.3% 188.7 / 6.1 95M293I (ATG→ATT) ybhRputative ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base C (51/25);  new base A (2/14);  total (56/39)
Fisher's exact test for biased strand distribution p-value = 1.17e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.86e-01

Only 100 of 101 total aligned reads displayed.

AGATAAGAAGTTACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGCCAGGTG  >  NC_000913/824992‑825467
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                             
aGATAAGAAGTTACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGc                                                                                                                                                                                                                                               <  2:1120268/239‑1 (MQ=255)
aGATAAGAAGTTACATCACCGTACGTCTAAACATCGCGTACGCCGCGGACCCTGTCGTGGCCGTTATCACCAGTAGGGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCATAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGc                                                                                                                                                                                                                                               <  2:950747/239‑1 (MQ=255)
  aTAAGAAGTTACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGca                                                                                                                                                                                                                                              >  1:315099/1‑238 (MQ=255)
        tgTTACATCACCTTACGTCTAAACACCGCGTCCGCCTCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATaaa                                                                                                                                                                                                                                       <  2:1179697/238‑1 (MQ=255)
                  aacgccttcaaaccATCGCGTACCCCTCTAACCCGGTGGGGGCCTTTACCACAATAAGCGGCCACAAACTATTCCACAAAATATCCAGACTCGCATCCTTAAAATAAATCTGCTGGTTAATGTCCGAAAAGGGGCGAATAGGGTTAACCCACGTAAGGTTTTGCAGCAATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAaca                                                                                                                                                                                                                               <  2:1078872/224‑1 (MQ=255)
                     tACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGAATCCTTCAAATAAATCTGCTTGGTAATGTCAGTAAAGTGGCGAATAGGGTTAATCAACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGCAACGTAACCGGAAAGAAGAATGGCGGGAATCAAAATGACaaaaaaggcg                                                                                                                                                                                                                          >  2:957631/1‑232 (MQ=255)
                       cGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAAACGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGAt                                                                                                                                                                                                                        >  1:654671/1‑239 (MQ=255)
                            aaaCATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGGGGGCATCATAACAACAAACACCCCGATCAAc                                                                                                                                                                                                                    >  2:908778/1‑238 (MQ=255)
                            aaaCATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAAAAAAAAAAGCCgcaaaaa                                                                                                                                                                                                                    >  2:174644/1‑232 (MQ=255)
                             aaCATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGc                                                                                                                                                                                                                                               <  2:279830/210‑1 (MQ=255)
                             aaCATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGc                                                                                                                                                                                                                                               >  1:279830/1‑210 (MQ=255)
                             aaCATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATaaaag                                                                                                                                                                                                                   >  1:149501/1‑236 (MQ=255)
                              acacCGGGTCCGCCGCTGACCCTTTCGGGCCCGTTATCACCATGAGCGGCCACAAACTATTCCACAAAATATCCAGACTCGAATCCTTCAAATAAATCTGCTTGGTAAGGTCCGTAAAGTGGCGAATAGGGTAAACCCACGTCAGGTTTTGAAGCCATCCCGGCA‑TGTTTTCCCCCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGcc                                                                                                                                                                                                                 <  2:332414/239‑1 (MQ=255)
                                  cgcgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGATCATAAAGACAAAAACGCCCATAAACGCct                                                                                                                                                                                                                >  2:693562/1‑236 (MQ=255)
                                  cgcgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCCCATAAAcctggc                                                                                                                                                                                                               >  1:1078872/1‑232 (MQ=255)
                                   gggTACGCCGCTGCCCCGTTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATCCCACACAATATCCAGCCTCGCATCCTTCAAATAAATCTGCTTGGTAATGCCCGTAAAGTGGCGAATAGGTTTAACCCACGTAAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAAAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCctgctg                                                                                                                                                                                                            <  1:177169/237‑1 (MQ=255)
                                   gcgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGc                                                                                                                                                                                                                                               <  1:43729/204‑1 (MQ=255)
                                     gTACGCCGCTACCCCTGTCGGGGCCTTTATCACCATTAGCGGCCACAAACTATTCCACAAAATATCCAGACTCGCATCCTTCAAAAAAATCTGCTTGGTAATGTCCGAAAAGGGGCGAATAGGGTTAACCCACGTCAGGTTTTGCAGCCATCCCGGCA‑TTTTTCCCACCGGAAAAACGTAACCGGAAAGGAGAAGGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCtgtt                                                                                                                                                                                                          <  2:149501/239‑1 (MQ=255)
                                              tgccccgaccGTGCCCGTAACCACCAGGGGCCGCCACAAACTATTCCACACAATATCCAGACGCGCACCCTCAAAATAACTCGGCGTGTTAAGCTCCGAAAGGGGGCGAATAGGGTTAATCCACGTCAGGTTTGGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGAAAAGGAGAATGGCGGGAATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGaa                                                                                                                                                                                                  <  2:1199554/229‑1 (MQ=255)
                                                    tGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGAAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCCCCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGAATCATAAAGACAACCACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGtg                                                                                                                                                                                           <  1:437303/239‑1 (MQ=255)
                                                          ggCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCC‑TGTTTTCCACCTGAGAAACGTAACCGGAAAGGAGAATGGAGGGCACCATAAAGACAAACACGCCCATAAAAGCCCGCAGCTGTGTTGCAAATAGAGATTaaa                                                                                                                                                                                     >  1:415538/1‑239 (MQ=255)
                                                                tATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCCTAAAGACAAACACGCCGATAAACGCCCGCTGTTGTGTTGAACAGAGAGATGAAATCAACa                                                                                                                                                                               >  1:1106418/1‑239 (MQ=255)
                                                                  cacccAGAAGCGGCCACAACATATCCCACACAATATCCAGGCGCGCTTCCTTAAAATAAATCTGTTTGTTAATGTCCGAAAAGGGGCAAATAGGTTTAATCCGCGTGAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGAAAAGGAGATTGGGGGGCATCATAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGa                                                                                                                                                                             <  2:265018/236‑1 (MQ=255)
                                                                  accccAGTAGCGGCCACAAACTATTCCACACAATAACCAGACCCGCATCCTAAAAATAAACCTGCTTGGTAATGTCCTAAAAGTGGCGAATAGGTTTAATCCACGTCAGGTTTTGCAGCAATCCCGGCA‑TTTTTTCCACCGGAGAAACGTAACCGAAAAGGAAAATGGCGGCCATCAAAAAGAAAACCACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGa                                                                                                                                                                             <  2:1041501/236‑1 (MQ=255)
                                                                     ccAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGTATGGCGGGGATCATAAAAACAAACACGCCGAAAAAAGCCCGCCGTTGGGTTGAAGAAGGTGATGAAATCAACAGACCg                                                                                                                                                                          >  1:254705/1‑239 (MQ=255)
                                                                         tAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACCCGCCGATAAACGCCCGCCGTTGTGTTGAACAGAGTGATGAAATCAAAAGCACGAAt                                                                                                                                                                       >  2:421338/1‑238 (MQ=255)
                                                                          aGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATc                                                                                                                                                                      >  1:478814/1‑238 (MQ=255)
                                                                              gCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGCTCATAAAAACAAACAAGCCGAAAAACGCCCTCCGGTGTGTTGAACAGATGGATGAAAACAAAAGACAGAAACccac                                                                                                                                                                  >  2:670974/1‑238 (MQ=255)
                                                                              accACAACCTATTCCTCCCAATACCCAGACCCACATTCATAAAATAAACTTGTTTGGTAATAACCATAAAGTGGCAAATAGGATTATTCCACGTCAGTTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACTAAAGCGGAAAGGAAAAGGGCGGTAAACATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCccac                                                                                                                                                                  <  1:957631/237‑1 (MQ=255)
                                                                                   aaaCTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCGGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGGGTTGAACAGAGTGATGAAATCAACAGACCGAATACCACCAGCGa                                                                                                                                                            >  1:457342/1‑239 (MQ=255)
                                                                                     aCTATTCCACACAATATCAAGACTCGCATCCTTAAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGTTTAACCCACGTCAGGTTTTGCAGCCATCCCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGAAAAGGAGAATGGCGGGAATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATa                                                                                                                                                          <  1:693562/239‑1 (MQ=255)
                                                                                                  ataaCCAGACTCGCACCCTTAAAAAAAATCTGCTTGGTAAGGCCCTAAAAGTGGCGAATAGGGTTAATCCACTTAAGGTTTTGCAGCCATACCGGCA‑TGTTTCCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCAAAATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCAc                                                                                                                                             <  2:660596/239‑1 (MQ=255)
                                                                                                  ataaCCAGACCCGCATCCCAAAAATAAATCTGCTTGGTAATGTCCGAAAGGGGGCGAATAGGGTTAACCCACGTCAGGTTTCGGAGCCATCCCGGGT‑GGTTTCCCACCGGAGAAACGGAACCGAAAGGGAGAATGGCGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCAc                                                                                                                                             <  2:177889/239‑1 (MQ=255)
                                                                                                   tatCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGCAACGTAACCGGAAAGGAGAATGGCGGGCCTCCTTAAGACAAACAAGCCCATAAAAGCCCACTGTTGTGTTTAACAGAGTGATGAAATCAACAAAACCCAAACCACCCGCCACTAACCATAAATCAc                                                                                                                                             >  2:1104094/1‑238 (MQ=255)
                                                                                                   tatCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCAcc                                                                                                                                            >  1:914838/1‑239 (MQ=255)
                                                                                                   gatctagtcgcGCAACCTTCAAATAGAGATGAGTGGAAATATCCATAGCGGGGCGAAAAGGGTTAGAGCACGGGAGGTTGTGCAGCCATCCAGGCA‑TATTAACCACGAAAGAAAGGTAACAGGAAAGGAGAAGGGCGAGAATAAAAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAAt                                                                                                                                                <  2:72208/225‑1 (MQ=255)
                                                                                                   cagatgtgtaaaagaaaaagaaaaaaatCTGCTTTGAAAGTCCCGAAAAGGGGCAAATAGGGTTAATCCCCGTAGGGTTTTGCAGCCATCCCGGCA‑TGTTTCCCACCGGAAAAACGTAACCGAAAAGGAGAATGGCGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCAc                                                                                                                                             <  2:1206406/218‑1 (MQ=255)
                                                                                                     cccAGACTCGCATCCTACAAAAAAATCTGCTTGGTAATGTCCTTAAAGGGGCGAATAGGGTTAACCCCCGTCAGGTTTTGCAGCCATCCCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAAGGGCGGGCATCATAAAGACAAACACGCCGATAAACGCctg                                                                                                                                                                                                               <  1:293843/169‑1 (MQ=255)
                                                                                                       cagacccgatcccagcAAAAAAATCTGCGGGGAAAGGTCCGAAAAGTGGCAAACAGGGTAAATCCCAGGCAGTTTTGGCACCAAGTCCGGCA‑TGGTTTCCACCGAAAAACTGAAACAGAAAAGGAGAATGGCGGGAACAAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCg                                                                                                                                        <  2:654671/224‑1 (MQ=255)
                                                                                                       cAGACTCGCACCCTGAAAAAAAATCTGCTGGTTAAGGTCCGTAAAGGGGCGAATAGGGTAAACCCACGTCAGGTTTTGCAGCAATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATAAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCg                                                                                                                                        <  2:478814/239‑1 (MQ=255)
                                                                                                       aagccaccattCCTTCAAAGAAATCTGCGTGGAAAGGTGCGAAAAGGGGGAAATAGGGTTAACCAACGTAAGTTTTTGAGGCAATACCGGCG‑TGTTTTCCACCGGAGAAACGTAACCGAAAAGGAGAATGGAGGGCATCATAAAGCAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCg                                                                                                                                        <  2:1203936/229‑1 (MQ=255)
                                                                                                       aaGACTCGCATCCTTCAAAAAATGCTGCTGGGTAATGTCCGTAAAGTGGCGAATGGGGTTAATCCCCGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGAAAAGGAGAATGGCGGGCATCATAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCg                                                                                                                                        <  1:962113/238‑1 (MQ=255)
                                                                                                       aaGACACACATCTTTAAAAAAATTCTGTTTGATAGTGCCATTAATGTGGATAAGAGGGTTAATCCACGCCAGGTTTTACGGCAATCCCGGCA‑TGTTTTCCCCCGGAAAAAGTTAACCGGAAAGGAGAATGGCGGAAAACAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCg                                                                                                                                        <  2:610818/238‑1 (MQ=255)
                                                                                                         gACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGCTAAACACCCGCTGGTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAAACATTAATAACCCTCGTa                                                                                                                                      >  1:914210/1‑239 (MQ=255)
                                                                                                          aCTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTaa                                                                                                                                     >  1:396947/1‑239 (MQ=255)
                                                                                                           cTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGGGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTaaa                                                                                                                                    >  1:660596/1‑239 (MQ=255)
                                                                                                           cTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGAAAAACGGCGGCTGTTGTGTTGAACAGAGTGATGAAATTAACAGACCGAATCCCAACAGCGATAAAACATAAATCACCATCGGaaa                                                                                                                                    >  2:329057/1‑239 (MQ=255)
                                                                                                             cGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCCTAAAAACAAAAACGCCCATAAAAGCCCGCTGGTTGGTTGAAAAAAAGGAGGAAAACAAACGACAGAAACCCCCCAACGATAAACCACAAAACACCCTACTAAAga                                                                                                                                  >  2:618714/1‑238 (MQ=255)
                                                                                                             cGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGt                                                                                                                                  >  1:178288/1‑239 (MQ=255)
                                                                                                             cGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGGGATGAAATACACAAACCGAATCCCACCCACGATAAACCCTAAATCACCATCGTAAAGt                                                                                                                                  >  2:727627/1‑239 (MQ=255)
                                                                                                             cGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGGGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGt                                                                                                                                  >  1:584673/1‑239 (MQ=255)
                                                                                                               cATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAGGTGGCGAATAGCGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGCTAAACGCCCGCTGTTGGGTTGAACAGAGTGATGAAATCAATAGACCAAATCCCACCAGCGATAAAACATAAATCACCCTCGTAAAGTAg                                                                                                                                >  1:259719/1‑239 (MQ=255)
                                                                                                               cATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGCGAATGGCGGGCATCATAAAGACAAACACGCCGGTCAACGCCCGCCGTTTGGTTGCACCGAGTGGTTAAATCAACAGACCCAATCCCCCCAACGCTCAACCATAAATTCCCATCCTaaacgag                                                                                                                                >  2:1144923/1‑235 (MQ=255)
                                                                                                               cATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCCTAAAGACAAAAACGCCGATAAACGCCTGCtgttgtgtt                                                                                                                                                                                                     >  2:293843/1‑170 (MQ=255)
                                                                                                               cATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCCCCAGCGATAAACCATAAATCACCATCGTAAAGTAg                                                                                                                                >  1:868001/1‑239 (MQ=255)
                                                                                                                 ccttgcAAAAAACTCTGCGTGGTAAGGTCGGAGAATGGGAAAAGAGGGTAAGCCCCCGTCGGTTTTTACAGCCATCCCGGCT‑TGTTTGCCACCAGAAAAACGTACCCGAAAAGGAGTTTGGCGGGAAACATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCGCCAGCGATAAACCATAAATCACCATCGTAAAGTAGaa                                                                                                                              <  2:254705/234‑1 (MQ=255)
                                                                                                                            agccTGTTTGGTAATGTCCGTAAAGTGGCGAATAGGTTTAATCCACTTAAGGTTTGGCAGCCATACCGGCT‑TGTTTTCCACCGGAGAAACGTACCCGGAAAGGAGAATGGCGGGCATAATAAAAAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCg                                                                                                                   <  1:945855/236‑1 (MQ=255)
                                                                                                                              ttttctggtgaaTGTCCACAAACGGGAGTATAGGGTAAACCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGTAGAAACGTAACCGAAAAGGAGAAGGGCGGGAATAAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGAt                                                                                                                 <  2:330589/229‑1 (MQ=255)
                                                                                                                              tCTGCTTGGTAATGTCCGTAAAGGGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGGTGAACAGAGTGATGAAATTAACAGAACGAAACCAACCAGCGATAAAACATAAAACACCATCGAAAAGTAGAAAAGCGCCAGCGa                                                                                                                  >  2:508410/1‑238 (MQ=255)
                                                                                                                                  cTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGtctgtctcttttacacctatc                                                                                                              >  1:1206406/1‑218 (MQ=255)
                                                                                                                                  cTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCg                                                                                                              >  1:492371/1‑238 (MQ=255)
                                                                                                                                  cTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACCCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCg                                                                                                              >  1:71868/1‑238 (MQ=255)
                                                                                                                                       tAATGTCCGTAAAGTGGCGACTAGGGATAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGGTGTTGTGTTGAACAGAGTGATGAAATTAACAGACCGAAACCCACCAGCGATAAACCCTAAAACAACCTCGTAAAGTAGAACAGCGCCAGCGATACGCCGAAg                                                                                                        >  2:738523/1‑239 (MQ=255)
                                                                                                                                       tAAGGTCCGTAAAGTGGCGAATAGGGTTAATCCACTCTAGGTTTTGCAGCCATGCCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGGGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATTAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGaa                                                                                                         <  1:329057/238‑1 (MQ=255)
                                                                                                                                        attctcagTAAAGTCGCAAAGAGTGATAACCCACTTCAGGTTTGGCAGCTATACCGGCA‑TTTTTTCCACCGGAGAAACGTACCCGGAAGGGAGAATGGGGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAg                                                                                                        <  2:340198/231‑1 (MQ=255)
                                                                                                                                           gcccGAAAAGGGGGGAATGGTTTAAATCCACGTCAGTTTTTGCAGCAATCCCGGTA‑TGTTTTCCCCCGGAGAAGCGAACCGGGAAAGGAGAATGGGGGGCAACATAAACACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGa                                                                                                    <  2:71868/237‑1 (MQ=255)
                                                                                                                                                      gtcGAATAGGGTTAACCCACGCCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGAAAAGGAGAAGGGCGGGAATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGcc                                                                                         <  2:178288/237‑1 (MQ=255)
                                                                                                                                                      ggCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGc                                                                                          >  2:963519/1‑238 (MQ=255)
                                                                                                                                                      ggCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGGTTTTGACAGAAGGATGAAATCAACAGACCGAAACCCACCAGAGATAAACCATAAATCAACATCGTAAAGTAGAACAGCGCCCACCAATCGGCGCAGGGGATTTTATACga                                                                                          >  2:716760/1‑237 (MQ=255)
                                                                                                                                                               ggTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAGATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCa                                                                                >  1:35787/1‑239 (MQ=255)
                                                                                                                                                               ggTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGGGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCa                                                                                >  1:98559/1‑239 (MQ=255)
                                                                                                                                                                gTTAATCCCCTACAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAAAAAGGTAACCGAAAGGGAGAAGGGCGGGCATAAAAAAGACAAACACGCCGATAAACGCCTGCTGGTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCa                                                                                <  1:637584/238‑1 (MQ=255)
                                                                                                                                                                    accccgttaggtgtttGGAGCATTACCGGCA‑TGTTTCCCCCCGAGAAAACGTAACCGAAAAGAAAAAGGGCGGGAAACATAAAAAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGc                                                                           <  2:1106418/226‑1 (MQ=255)
                                                                                                                                                                    aTCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGAAAAAAGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAAACATAAATCACCATCGTAAAGTAGAAAAGCGCCAGCGATCCGGCGAAGGGGATTTGATAAGCCCAGAAACCacacc                                                                            >  2:880084/1‑234 (MQ=255)
                                                                                                                                                                    aTCCACGTCAGCTTTTGCAGCCATGCTGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGACTGGCGGGAATCATAAGGAGAAAAACGCCGAAAAACCCCTGCTGTTGTGTTGGAAAGAGTGATGAAATCAACAGACCGACTCCTCCCAGCCAGAAACCCTAAAATACCATCGAAAAGTAGAACAGCCCCAGCGAACCGGGGCAGGAGACTTTATACCCCCAGACAACCATCg                                                                            >  2:713597/1‑238 (MQ=255)
                                                                                                                                                                     aaccaggtgggTTTTGCAACCCTAACGGGATTGTTTCCCACCGAAAAAAGGTAACGGAAAGGGAGAATGGCGTGCATCATAAAAACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGc                                                                           <  1:202810/230‑1 (MQ=255)
                                                                                                                                                                         cGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAgg                                                                       >  2:324190/1‑237 (MQ=255)
                                                                                                                                                                         cGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGGGTTGAACAAAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCCGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGACAGc                                                                       >  1:1237520/1‑238 (MQ=255)
                                                                                                                                                                          gTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCCTCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTTAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCCATCGCCAGcac                                                                     >  1:571501/1‑239 (MQ=255)
                                                                                                                                                                          gTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGcac                                                                     >  1:1114465/1‑239 (MQ=255)
                                                                                                                                                                          gTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATAAGCCCAGATACCAATCGCcaccac                                                                     >  1:603587/1‑239 (MQ=255)
                                                                                                                                                                                   tGCAGCCAACCCGGCA‑TGTTTACCACCGAAGAAACGTAACCGGAAAGGAGAATGGCGGGCAACAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGc                                                            <  1:508410/239‑1 (MQ=255)
                                                                                                                                                                                         cATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGaa                                                      >  1:335339/1‑239 (MQ=255)
                                                                                                                                                                                          aTACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAg                                                     >  1:423352/1‑239 (MQ=255)
                                                                                                                                                                                          aTACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCCGCTGTTGTGTTTAACAGAGTGATGAAATCAACAGAACGTATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAACGCCAGCGATCCAGCGAAGGGGATTTGATACGCCCAGAAACCAATCCCCAGCACAAAGGAGGCCTGGAAg                                                     >  2:149079/1‑239 (MQ=255)
                                                                                                                                                                                                  a‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACAATCGTAAAGTAGAACAGCGACAGCGATCCGGCGAAGGGGATTTGATACGCCTCGAGACCAATCGCCAGCACAATGGAGGCCTGGAAGGTGGCGAc                                             >  1:107172/1‑239 (MQ=255)
                                                                                                                                                                                                      ttttCCACCGGAGAAAGGTACCCGGAAAGAAGAAGGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGa                                                                                                          <  2:750947/175‑1 (MQ=255)
                                                                                                                                                                                                      ttttCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCCTCATAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAAAAGAGTGATGAAATCAAAAGACCGAATCCCACCCGCGATAAACCATAAATCACCATAGGAAAGCAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTTATACGCCCAGATACCCATCGCCAGCACAATGGTGGCCTTGAAGGGGGCGACact                                          >  2:530956/1‑237 (MQ=255)
                                                                                                                                                                                                       ttaccACCGGAGAACCGTAACCGGAAAGGAGAATGGGGGGCATAAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAAtt                                         <  2:603587/236‑1 (MQ=255)
                                                                                                                                                                                                          ccACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGAATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAAc                                      <  1:727627/239‑1 (MQ=255)
                                                                                                                                                                                                            acggaaaaaaCGAAACCGAAAAGGAGAGGGGCGGGCAACAAAAAGAAAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGc                                    <  2:423352/232‑1 (MQ=255)
                                                                                                                                                                                                            aCCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACg                                     >  1:157790/1‑238 (MQ=255)
                                                                                                                                                                                                                gagaAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTg                                                                                                >  1:750947/1‑175 (MQ=255)
                                                                                                                                                                                                                     aCGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACg                             >  2:434455/1‑237 (MQ=255)
                                                                                                                                                                                                                         aaCAGGAAAGGAGAATGGCGGGAATAAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGTATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTg                       <  1:149079/239‑1 (MQ=255)
                                                                                                                                                                                                                                aaGGAGAATGGCGGGCATCATAAAGACAAACACCCCGATAAACGCCTGCTGTTGGGTTGAACCGAGGGATGAAATAAACGGACCGAATCCCACCAGCGATAAACCATAAATCCCCATCGTAAAGTAGAACAGCCCCAGCGATCCGGCGGAGGGGATTTGATACGCCCAGATACCAATCGCCACACCAATGGTGGCCTGGGAGGGGGCGACAATTAACGCCGGGACGCCGTTGCCGCTGa                >  2:1160704/1‑239 (MQ=255)
                                                                                                                                                                                                                                    agaATGGCGGGCATCAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAg              <  2:315099/237‑1 (MQ=255)
                                                                                                                                                                                                                                    agaATGGCGGGAATAAAAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAg              <  1:1059951/237‑1 (MQ=255)
                                                                                                                                                                                                                                             ggCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtg                                                                 >  2:294875/1‑177 (MQ=255)
                                                                                                                                                                                                                                              gCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGAGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGCCAggtg  >  1:1249762/1‑239 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                             
AGATAAGAAGTTACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCA‑TGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCCGATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGCCAGGTG  >  NC_000913/824992‑825467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A