Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I0 R1 140 172.9 3477528 97.9% 3404499 226.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,798,500 T→G 10.8% H148P (CAC→CCC)  pheS ← phenylalanine tRNA synthetase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,798,5000TG10.8% 342.2 / 5.2 131H148P (CAC→CCC) pheSphenylalanine tRNA synthetase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base T (58/54);  new base G (16/3);  total (74/57)
Fisher's exact test for biased strand distribution p-value = 1.11e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 132 total aligned reads displayed.

GTGCCTTTCAGGTTGGTAAAGC‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCAT  >  NC_000913/1798266‑1798728
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                     
gtgccttgtgagTTGGGAAAGCGGGAGGTTGG‑ATCATCAATGTGGCCTTCCATCTGATGGAACAGCGGCGTGTGAGTCTGCTCGTAGTCGTTACGATAAACACAGCCCGGCTCGATGATACGAAGCGGTGGCTGCTGGGCTTTCATGGTGCGGATGTGTACGCCAGATGTCTTGGTGCGCAGTAGGCGGGTAGTGTCAAAGCAGAAAGT‑GTCGTGGTCAGCGCGCGCCTGgtggtgtc                                                                                                                                                                                                                                    <  1:463277/227‑3 (MQ=255)
gTGCCTTTCAGGTTGGTAAAGC‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGAc                                                                                                                                                                                                                                    <  2:1547334/238‑1 (MQ=255)
  gCCTTTCAGGTTGGTAAAGC‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCa                                                                                                                                                                                                                                  <  2:94565/238‑1 (MQ=255)
           gTTGGTAAAGC‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGACACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGGGGCAAACCAGAAAAT‑GTCGGGGGCACCCCGCGCCGGGGGGGGACCAGGAAtatgcg                                                                                                                                                                                                                        >  1:1586671/1‑234 (MQ=255)
            ttGGTAAAGC‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCa                                                                                                                                                                                                                        <  2:1486490/238‑1 (MQ=255)
              ggTAAAGC‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGGAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGGGGGGACCCGGGATGGTCaga                                                                                                                                                                                                                      >  2:1341754/1‑238 (MQ=255)
                 aaaGC‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CAt                                                                                                                                                                                                                 <  1:1693839/239‑1 (MQ=255)
                     c‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAAACAGAAAGA‑GTCGTGGGTAGCGCGCGCCGGGTGGTGAGCAGGAATGTTCAGAG‑CATCGag                                                                                                                                                                                                             >  1:1198205/1‑238 (MQ=255)
                           gTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGGGGCCAGGAATGTTCAGAG‑CATCGAAGGTAt                                                                                                                                                                                                        >  2:668326/1‑239 (MQ=255)
                               gTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGa                                                                                                                                                                                                                               <  2:1564867/213‑1 (MQ=255)
                               gTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATa                                                                                                                                                                                                    >  2:1231651/1‑239 (MQ=255)
                                         tCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAAACGTCTTCg                                                                                                                                                                                          >  2:1650882/1‑239 (MQ=255)
                                         tCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGGCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCATAG‑CATCGAAGTTATGATAAACGTCttt                                                                                                                                                                                           >  2:1365293/1‑237 (MQ=255)
                                         tCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGGAGTGTCAAACCAGAAAGT‑GTCGTGGGCAGCGCGGGCCGGGGGGGGACCAGGAATGGTCAGAG‑GATCGAAGGTTTGATAATCGTCTTCg                                                                                                                                                                                          >  2:641267/1‑239 (MQ=255)
                                         tCAGACCTTCCATCTGATGGAACATCGGCGTGTGAATCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCCGGGATTTCATGGTCCGGATCTGTACGCCAGAAGTCTGGGTACGGAGGAGGCGGGTAGTGTCCAACCAAAAAAG‑GTAGTGGGTAACGGGACGCGGGGGGGGAACAGAAATGATCCGAG‑CATctcaagtttgtatatcgtactcg                                                                                                                                                                                          >  1:392888/1‑217 (MQ=255)
                                             aCCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGGGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGGGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTCTGATAATCGTCTTCGAttt                                                                                                                                                                                      >  2:1314084/1‑239 (MQ=255)
                                                 tCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGGCCAGGAATGGTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTTCg                                                                                                                                                                                   >  2:1647756/1‑238 (MQ=255)
                                                 tCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGAc                                                                                                                                                                                                                                    <  1:673929/190‑1 (MQ=255)
                                                 tCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGG‑GGCGTGGGCAGGGCGCGCCGGGGGGGGGCCCGGAATGGTCCGAGCCACCGAGGTT‑TGGTAAACGTCTTccgttttcg                                                                                                                                                                                   >  1:1261678/1‑230 (MQ=255)
                                                 tCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGGAGGGGTCAACCCGCAAGT‑GTCGTGGGTCGCGCGCCCCGGGGGGGTGCCCGGGATGGTCAGAG‑CAATGAAGGTATTGTAATCGTCtttcgttttcg                                                                                                                                                                                   >  1:1505667/1‑229 (MQ=255)
                                                 tCCATCTGATGGAACATCGGCGTGTGAGTCTGGGCGTAGTCGTTAAGCTAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCGAGAGGTCTGGGCACGCAGCAGGCGGGTAGTGTCAAAACAGACAGTAGGCG‑GGTCAGTGGGGGACGGGTGGGGAGCAGGCATGATCAGAG‑CAACGCAGTCATGATAATCGTACTCGGTTTACgg                                                                                                                                                                                  >  1:459758/1‑239 (MQ=255)
                                                  ccATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGc                                                                                                                                                                                 <  2:127912/239‑1 (MQ=255)
                                                         aTGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGGGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGtt                                                                                                                                                                           >  2:345162/1‑238 (MQ=255)
                                                          tGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGc                                                                                                                                                                         <  2:1648485/239‑1 (MQ=255)
                                                          tGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGc                                                                                                                                                                         <  2:1290926/239‑1 (MQ=255)
                                                           ggAACATCGGCGTGTGAGGCTGGTCGTAGGCGTTACGATAAACCCGGCCAGGCGCGATGATGCGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGc                                                                                                                                                                         <  1:1433959/238‑1 (MQ=255)
                                                               cATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGGCTGGGTACGCAGCAGGCGGGTAGTGTGAAACCAGAAAGG‑GGCGTGGTCAGCGCGCGCCGGGGGGTGACCAGGGATGGTGAGAG‑CATGGGAGTTATGGGAATCGTCTTCGATTTCCCGCCCCGGGGCCACgg                                                                                                                                                                    >  1:583602/1‑239 (MQ=255)
                                                                       tgtgAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGGAGTGTCCAACCAGAAAGG‑GTCGGGGGCAGCGCGCGCCGGGGGGGGACCAGGGATGTTCAGAG‑ACTCGAAGGTATGATAATCGTCTTCGATTTCCGGCCCGGGTGCCACGGGAAAGCCa                                                                                                                                                            >  1:21371/1‑239 (MQ=255)
                                                                          gAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAg                                                                                                                                                          <  2:885360/238‑1 (MQ=255)
                                                                                 gTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCg                                                                                                                                                   <  1:1396538/238‑1 (MQ=255)
                                                                                 gTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGGGGTCCGCGCGCGCCGGGTGGGGACCAGGAATTTTCAGAG‑CATCGAAGGTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTccccca                                                                                                                                                  >  2:1319139/1‑237 (MQ=255)
                                                                                 gTCGTAGTCGTTACGATAAACACGGCCAGGAGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGAGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGGAGGGTCAAACCAGAAAGC‑GCGGGGGGCAGCGCGCGGCGGGGGGTGACCAGAACTGATAAGCA‑CATCCAAGTTATGATTATCGCCTTCGATTTCCAGCCCGGTTGCCACGGTAAAGCCAAGCTCACCgc                                                                                                                                                  >  1:1223122/1‑238 (MQ=255)
                                                                                    gTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCgaaga                                                                                                                                               <  2:1275688/239‑1 (MQ=255)
                                                                                    gTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCgaaga                                                                                                                                               <  2:1261678/239‑1 (MQ=255)
                                                                                     tAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCgaagaa                                                                                                                                              >  2:1368961/1‑239 (MQ=255)
                                                                                            tACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCgaag                                                                                                                                                >  2:402794/1‑230 (MQ=255)
                                                                                               gATAAACACGGCCAGGCGCGCTGATACGAATCGGTTGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATa                                                                                                                                    <  1:764764/239‑1 (MQ=255)
                                                                                               gATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATa                                                                                                                                    <  1:1368961/239‑1 (MQ=255)
                                                                                                    acacGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTc                                                                                                                               <  2:1195733/239‑1 (MQ=255)
                                                                                                      tcGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGCTCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCGCGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGa                                                                                                                             <  2:698106/238‑1 (MQ=255)
                                                                                                      acGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGa                                                                                                                             <  2:117403/239‑1 (MQ=255)
                                                                                                         gCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCCCCGAAGAAACTTTCGATACGGTCGATgg                                                                                                                          >  2:940643/1‑239 (MQ=255)
                                                                                                         gCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATgg                                                                                                                          >  2:1029259/1‑239 (MQ=255)
                                                                                                         gCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGCGGCAAACCAGAAAGT‑GTCGTGGGCAGCGCGCGCCGGGGGGTGACCAGGAATGTTCCGAG‑CATCGCAGTTATGATAATTGTCTTCGATTTCCAGCCCGGTTGCCACGGCAAAGCCAAGCTCACCGGAGAAAATTTCGCTACGGtggccgg                                                                                                                          >  1:1195733/1‑233 (MQ=255)
                                                                                                          ccAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGGGGTGACCAGGAATGTTCAGAG‑CATCGCAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGACGGAACTTTCGATACGGTCGATGGt                                                                                                                         >  1:1570268/1‑239 (MQ=255)
                                                                                                                  gatgatACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTa                                                                                                                  <  2:876990/238‑1 (MQ=255)
                                                                                                                    tgatACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAAc                                                                                                                <  1:1615214/238‑1 (MQ=255)
                                                                                                                        aCGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGGAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGGCCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGGTTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCCACGAAGAAAATTTCGAGACGGTCGATGGTATGGGTAACCCGAt                                                                                                           >  1:398637/1‑239 (MQ=255)
                                                                                                                                               tCATGGGGCGGATCTGGACGCTGGATGTTTGGGTACGCAGCAGGCGGGTAGTGTAAAACCAGAAAGT‑GTCGTGTTCAGCGAGGGCCGGGTGGTGACCAGGAATGTACAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGTTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGcga                                                                                    <  1:1115556/239‑1 (MQ=255)
                                                                                                                                                 aTGGTGCGGATCTGTCCGCCAGAGGTCTGGTTACGCAGGAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGcgacg                                                                                  <  1:1161007/239‑1 (MQ=255)
                                                                                                                                                   ggggCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCgacgac                                                                                <  2:1518520/236‑1 (MQ=255)
                                                                                                                                                    gTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGGGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGcgacga                                                                                 >  2:1259068/1‑237 (MQ=255)
                                                                                                                                                       cGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGG‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATg                                                                                                                           >  1:316412/1‑192 (MQ=255)
                                                                                                                                                        ggATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTgg                                                                            <  1:1231651/238‑1 (MQ=255)
                                                                                                                                                          aTCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAAACAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGGGACCCGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGGAAAGCCAAGCACCCCGAAGAAACTTTCGATACGGTCGATGGTACGGGGAACCGGATGCAGACCGCCGTTTTCAATTCGACGACCTGGCag                                                                         >  1:579639/1‑239 (MQ=255)
                                                                                                                                                            cTGTACGCTAGAGGTGTGGGTAGCCAGCAGGCGGGGAGTGTCAATACAGAAGGT‑GTCGGCGTCAGCGCGCGCCGGGGGGGGACCAGGAATGTTCAGAG‑CATCGAAGTTATGAGAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCCCCGAAGAACCTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCaga                                                                        <  1:952517/238‑1 (MQ=255)
                                                                                                                                                               tACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACg                                                                                                                                  <  2:1400051/177‑1 (MQ=255)
                                                                                                                                                               tACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACg                                                                                                                                  >  1:1400051/1‑177 (MQ=255)
                                                                                                                                                               tACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGt                                                                                                                         >  2:727834/1‑186 (MQ=255)
                                                                                                                                                               tACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGt                                                                                                                         <  1:727834/186‑1 (MQ=255)
                                                                                                                                                               tACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGa                                                                                                      <  1:1196386/205‑1 (MQ=255)
                                                                                                                                                               tACGCCAGAGGTCTGGGTACGCAGCAGGCGGGGAGTGTTAAACCAGAAAGT‑GTCGGGGGCAGCGCGCGCCGGGGGGTGACCAGGAATGATCACAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCACACAGACGTAACTTTCGATACGGTCGGAGGGACGGGTAAACGGGTGCAGACCGCCGTTTTGAAAGCGGCGACCTGGCggagag                                                                     >  1:509600/1‑238 (MQ=255)
                                                                                                                                                                    cAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACgg                                                                                                                                                                    <  1:1361861/138‑1 (MQ=255)
                                                                                                                                                                    cAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGCACTGGGCGGGAGACACCa                                                               >  1:21728/1‑239 (MQ=255)
                                                                                                                                                                         gTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGGAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGGCGATGGGACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGt                                                          >  1:1726528/1‑239 (MQ=255)
                                                                                                                                                                          tCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCgacgac                                                                                <  2:511595/216‑1 (MQ=255)
                                                                                                                                                                            tGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGttt                                                        >  2:1498647/1‑238 (MQ=255)
                                                                                                                                                                              ggTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGGGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTcc                                                      >  2:1177440/1‑238 (MQ=255)
                                                                                                                                                                              ggTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGG‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGCATGCTCAGAG‑CATCGAAGTTATGATAATAGTCTTCGGTTTCCCGCCCGGGTGCCCCGGTAAAGCCAAGCTCACCGAAGAAACTTTCGGTACCGTCGACTGTCCGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTAGCAGAGAGTCATCAATGCTTTcc                                                      >  1:1692887/1‑238 (MQ=255)
                                                                                                                                                                                   gcagcaGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCcgccgc                                                 >  2:682631/1‑238 (MQ=255)
                                                                                                                                                                                   gcagcaGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCcgccgc                                                 >  1:1578606/1‑238 (MQ=255)
                                                                                                                                                                                   gcagcaGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCgccgcc                                                >  2:262499/1‑239 (MQ=255)
                                                                                                                                                                                     ggcagGGGGGTAGGGTCAAGCCAGAAAGG‑GTCGTGGACAGCGCGCGCCGGTTGGGGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTACCGCCGCCa                                               <  1:18785/237‑1 (MQ=255)
                                                                                                                                                                                     ggcagGCGGTTAGTGTCAAACCAGAAAGG‑GGCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCa                                               <  1:1119142/237‑1 (MQ=255)
                                                                                                                                                                                     agcagGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCa                                               <  1:1650882/238‑1 (MQ=255)
                                                                                                                                                                                        agGCGGGTAGTGTCAAACCAGAAAGT‑GTCGGGGTCAGCGCGCGCCGGGTGGTGACCAGGGATGTTCAGAG‑CATCGAAGTTATGATAATAGCCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGACAAGCTCACCGAAGAAAATTTCGATACGGTCGATGGTATTGGTAATCGGATGCAGACGGCCGGTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGATTCCGCCTCTAGAc                                            >  1:285152/1‑238 (MQ=255)
                                                                                                                                                                                        agGCGGGGAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGGAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGAc                                            >  2:1119142/1‑238 (MQ=255)
                                                                                                                                                                                          gCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGAcgc                                          >  2:466331/1‑238 (MQ=255)
                                                                                                                                                                                             ggTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCAt                                      >  2:1139987/1‑239 (MQ=255)
                                                                                                                                                                                               tAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCAtt                                     <  2:392888/238‑1 (MQ=255)
                                                                                                                                                                                               tAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCAtt                                     <  2:509600/238‑1 (MQ=255)
                                                                                                                                                                                               tAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCAtt                                     >  1:1711171/1‑238 (MQ=255)
                                                                                                                                                                                                   gtCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGTTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCTCCGAAGAAACTTTCGATACGGTCGATGGTATGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTg                                <  2:285152/239‑1 (MQ=255)
                                                                                                                                                                                                   gtCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTg                                <  2:1053196/239‑1 (MQ=255)
                                                                                                                                                                                                    tCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGc                               >  2:1430909/1‑239 (MQ=255)
                                                                                                                                                                                                    tCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGc                               >  2:637828/1‑239 (MQ=255)
                                                                                                                                                                                                    tCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCAGCCGCCAGACGCGCATTCAGTGc                               >  1:1651071/1‑239 (MQ=255)
                                                                                                                                                                                                    tCAAACCAGAAAGT‑GTCGTGGTCAGCGAGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGATATCAATCGTTTCCGCCGCCTGCCGCGCATTCCGtt                                >  1:258913/1‑237 (MQ=255)
                                                                                                                                                                                                       aaCCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGcga                                                                                    <  1:1660025/183‑1 (MQ=255)
                                                                                                                                                                                                       aaCCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGcga                                                                                    >  2:1660025/1‑183 (MQ=255)
                                                                                                                                                                                                                   gtCGTGGGCAGAGGGCGGCGGGGGGGGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGCCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTGGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGt                  <  1:897231/238‑1 (MQ=255)
                                                                                                                                                                                                                     cGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTcc               >  2:897231/1‑239 (MQ=255)
                                                                                                                                                                                                                     cGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTAAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCCTTCAGTGCAGCGCTTCCCAGTTc                >  1:1588493/1‑238 (MQ=255)
                                                                                                                                                                                                                          tCAGCGGGCGCCGGGGTGTGCCCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCtt           <  1:1177440/238‑1 (MQ=255)
                                                                                                                                                                                                                          tCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCtt           <  2:21371/238‑1 (MQ=255)
                                                                                                                                                                                                                            aGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCCGTTCCGCTTTa         >  2:917697/1‑238 (MQ=255)
                                                                                                                                                                                                                            aGCGCGCGCCGGGCGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGCTTTCCGGCCCGGTTGCCACGGTGAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCCATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAGTGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCCAATTCAGTGCCGAGCTTTcccgctcacctttc         >  1:136398/1‑226 (MQ=255)
                                                                                                                                                                                                                              cgcgcgcCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTAcgc      >  1:173434/1‑239 (MQ=255)
                                                                                                                                                                                                                              cgcgcccCGGGTGGTCACGAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTCCCGCCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGGCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTAcg       <  1:917697/238‑1 (MQ=255)
                                                                                                                                                                                                                                   gcCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAACCTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATTAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCCTTTCCGCCTTAcacccct  >  1:462893/1‑232 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                     
GTGCCTTTCAGGTTGGTAAAGC‑TGATGTTGGTATCAACAATCAGACCTTCCATCTGATGGAACATCGGCGTGTGAGTCTGGTCGTAGTCGTTACGATAAACACGGCCAGGCGCGATGATACGAATCGGTGGCTGCTGGGCTTTCATGGTGCGGATCTGTACGCCAGAGGTCTGGGTACGCAGCAGGCGGGTAGTGTCAAACCAGAAAGT‑GTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAG‑CATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCCACGGTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCAT  >  NC_000913/1798266‑1798728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A