Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F17 I0 R1
|
124 |
155.2 |
3079696 |
98.3% |
3027341 |
226.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,256,052 |
G→C |
15.2% |
G138G (GGC→GGG) |
plsB ← |
glycerol‑3‑phosphate O‑acyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,256,052 | 0 | G | C | 15.2%
| 365.9
/ 12.5
| 146 | G138G (GGC→GGG) | plsB | glycerol‑3‑phosphate O‑acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (46/76); new base C (16/8); total (62/84) |
| Fisher's exact test for biased strand distribution p-value = 1.23e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 146 total aligned reads displayed.
ATCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGC > NC_000913/4255821‑4256282
|
aTCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTTGCCttttt > 1:1506502/1‑239 (MQ=255)
aTCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTTACTTCGCCttttt > 1:1336053/1‑239 (MQ=255)
aTCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGCCctttt > 1:64375/1‑239 (MQ=255)
ccTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGCCtttttt > 1:882806/1‑237 (MQ=255)
ccTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACCTCCCCtttttt > 2:616669/1‑237 (MQ=255)
gACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTTTCCTCGCCTTTTT‑TAcc > 1:640906/1‑237 (MQ=255)
cGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGccc < 1:97605/239‑1 (MQ=255)
gCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCCCCTCGCCCTTTT‑CTCGccccc > 2:878974/1‑237 (MQ=255)
cAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTTGCCTTTTT‑CTCGcccccg > 1:211670/1‑236 (MQ=255)
cAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTGTACCTCGCCtttttttagcacccg > 2:525736/1‑228 (MQ=255)
ggCAAACTTGGGCCTACGGAGGCCGGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGgcg < 1:1016983/238‑1 (MQ=255)
cAAACGTGGGCCTGCGGTAGCCGGTGGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGgcg < 2:1463512/236‑1 (MQ=255)
aaaCGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCCCCttttttgcccccccgccccc > 2:244740/1‑223 (MQ=255)
aaaCGTGGCCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGgcgcgc < 1:567642/238‑1 (MQ=255)
tGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCCCCCTTTT‑TACGCCCCCGCGCGC‑GGCC‑aa > 1:103141/1‑239 (MQ=255)
gCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑caaaa > 1:1354283/1‑237 (MQ=255)
gCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACCTCGCCTTTTT‑TTCGCCCCGgccccccgccccaa > 2:426131/1‑226 (MQ=255)
gCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGGCCCTTCCCCTTTTT‑TCCGCCCCCGCCCGC‑GCCC‑CAAc > 1:69454/1‑238 (MQ=255)
ccTACGGCCGCCAGATGTTGACGGGAAAAGTG‑CATCCGCGCCCCGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTCCATCCGCCATACGGCGCAGCGAAACTGCCGGGGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACa < 1:890021/238‑1 (MQ=255)
aCGACAGCCGGACGTGGACGGGAAATGTG‑CATCCGCGCCCGCCGCGCCAGTTTCTGAGCGATAGTTTTAGCTGTGCCGTGTTACCCCGCCATGCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAATCGGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTGCGCCGTTAAGCATACGCAGCGGCGGGTTCACTGCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AATCATC‑Ac < 2:1026425/239‑1 (MQ=255)
cggcacccgtcggtggcggggAAAAGTG‑CATCCGCCCCCCGCGCCCCGCTTTCGGCGCGATATTTTTCCCCGTGCCGTGTCCACCCGCCAACCGGCGCAGCGAAACTGACGGCGAGAAACGCCAAAAACTGTCGCGCCCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑Acc < 2:742673/221‑1 (MQ=255)
gcggCCAGCCGTGGCCGGGCAAAGTG‑CATCCGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATCCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAACCGGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑Acc < 2:1344029/234‑1 (MQ=255)
agcccAGACGTTGCCGGGCAAAGTG‑CATACGCGCCCCGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGa < 2:663636/235‑1 (MQ=255)
gCCAGCCGTGGACGGGCAAAGTG‑CATCCGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTACCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGaca < 2:211670/238‑1 (MQ=255)
gCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑TACCCCCCCGCGCGC‑GACC‑CAACATC‑Accccca > 1:340067/1‑234 (MQ=255)
ccAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGACTTTTT‑TACCCCCCGGCTCGC‑GACC‑CAAAAAT‑ACCGacac > 1:121036/1‑238 (MQ=255)
cAGCCGTTG‑CGGGGCAAGTGCCATCCGCGCCCCGCGCGCCAGTTTCTGACCGATAGTTTTAGCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGCCCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGaca < 2:326162/236‑1 (MQ=255)
cAGACGTTGACGGGCAAAGTG‑CATCCGCGCCCCGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGaca < 1:329513/236‑1 (MQ=255)
ccGTTGACGGGCAAAGGC‑CATACGCCCCACGCGCGCCAGTTCCGGGGCAATAGTTTTACCCGTGCGGTGTTCTCCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGc < 2:882806/237‑1 (MQ=255)
aCGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTTGCCTTTTT‑TCCCCCCCGGCGCGC‑GACC‑ACAAATA‑Acccgccacggc > 1:413979/1‑229 (MQ=255)
cttggaggggCAAAGTG‑CATCCGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTACCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACGGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGc < 2:64375/230‑1 (MQ=255)
tgtGACGGGAAAAGTG‑CATACGCGCCCCGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCTTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCAcc < 1:525736/237‑1 (MQ=255)
aCGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACCTCGCCTTTTT‑TACCCCCCGGCGCGCGGCCC‑AAACA‑C‑ACCGACACCGGCAccc > 2:149660/1‑235 (MQ=255)
gggCAACGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGc < 1:1376778/239‑1 (MQ=255)
aTACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACGGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGAt < 1:705008/238‑1 (MQ=255)
tACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCCC‑CACC‑AAACATC‑CCCGGCACTGGGACCCTCTGCCCCACCCGAttt > 1:1260624/1‑239 (MQ=255)
tACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTTACTTCGCCTTTTT‑CACGCCCCCGCCCCC‑GCCC‑AAACCTC‑ACCCCCCCTGGCACCCTCTTCCCCTCCCGAttt > 1:135470/1‑239 (MQ=255)
cgcgcccgccggccaggTTTCTGGCGGATGGTTTTGCCCTTGCCGTGTTCACCCGCCGTCCGGCGCAGCGAACCTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTg < 2:1321591/222‑1 (MQ=255)
cgcCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCCTTTT‑CACCCCCCGGCCGGC‑GACC‑AAACAAC‑ACCCACACCAGCTACCCCTGCACACCCCGATTTgggg > 2:341639/1‑238 (MQ=255)
ccACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGTCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCCCTTCGCCTTTTT‑CAACCCCCCGCGCGC‑CTCC‑AAACAAC‑ACACACACCGGCACCactcctccataccagctttggttt > 2:592152/1‑216 (MQ=255)
ccACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTTACTTTCCCTTTTT‑CACGCCCCGGCGAGC‑GAAC‑AAAAATC‑ACCCACACTGGCACCACATTCACATCCCGATTTgggat > 1:703419/1‑236 (MQ=255)
ccACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑TACGCCCCCGCCCGC‑GACC‑AAACATC‑ACCCGCACTGGCACCCCCTGCCCATCCACATTTTGGtt > 1:978033/1‑238 (MQ=255)
ccACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCCCCTTTTT‑TACGCCCCGGCGCGC‑GACC‑CAACAAC‑ACCGCCACTGGGCCCATCTGCACCTCCCAGTTTTGGTTg > 1:817642/1‑239 (MQ=255)
cgcCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGCTCACTTCGCCTTTTT‑TACGCCCCCGCGCGC‑GCCC‑CAACATC‑ACCGACACCCGCACCATCTGCCCATCCAGATTTTGGTTGCTACgcg > 1:191928/1‑237 (MQ=255)
gcCAGTTTTTGAGCGATGTGTTTATCCGTGCCGTGTTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTg < 2:487540/239‑1 (MQ=255)
ccaggttgcgagccGATATTTTTATCCGTGCCGTGTTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTg < 2:1354283/226‑1 (MQ=255)
ccAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑CACC‑AAAAACC‑ACCCACACTGGCCCCATCTGCACCTCCAGATTTGGGTTTCTACGGTGc > 1:688769/1‑239 (MQ=255)
ggaaTAGTTTTATCCGTGCCGGGTGCACCCGCAAAACGGCGAAGCGAAACGGACGGCGAGAAACGCACAAAACTTTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGAt < 2:924803/235‑1 (MQ=255)
gCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGAt < 1:562415/238‑1 (MQ=255)
gCGATAGTTTTATCCGTACCGTGTTCATCCGCCGTACGGCGCGGGGAAACTGAGGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGAt < 1:471439/238‑1 (MQ=255)
cggATAGTGTTAGCCGGGCCGTTTTCATCCACCATAGGGCGCAGGGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGAt < 2:826538/236‑1 (MQ=255)
aTAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACCTCGCCTTTTT‑TACGCCCCGGCGCGC‑GACC‑CAACATC‑ACCGACACTGGCACCATCTTCACCTCCCGATTTGGGTTGGTACGGTGCAAATCGAGATAGTc > 1:422738/1‑239 (MQ=255)
tgaacccgtgccgtgTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTgg < 2:69454/233‑1 (MQ=255)
ttgacgggaccggttcaagcccccATACGGCGCAGCGAAACTGACGGGGAGAAACGCCCAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:530803/217‑1 (MQ=255)
ttATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 1:1067615/239‑1 (MQ=255)
ttATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 1:498482/239‑1 (MQ=255)
ttATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:228098/239‑1 (MQ=255)
ttATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 1:1189943/239‑1 (MQ=255)
ttACCCGTGCCGTGTTCATCCGCCACCCGGCCCCGCGAACCTGACGGCGAGAAACGCACAAACCTGTCGCGCCCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:157295/239‑1 (MQ=255)
ttACCCGTGCCGGGTCCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCAAAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:340067/239‑1 (MQ=255)
ttACCCGGGCCGGGTCCATCCGGCATACGGCGCAGCGAAACTGACGGCGAAAAACGCACAAAACTGTCGCGACCGGGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:1161246/239‑1 (MQ=255)
ttACCCGGGCCGGGGCCACCCGCCATACGGCGCAGCGAAAATGACGGCGAAAAACGCACAAAACTGCCGCGACCGGGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:413979/239‑1 (MQ=255)
ttAACCGTGCCGGCTCCAGCCGCCATGCGGCGCAGCGAAACGGACGGCGAGAAACCCAAAAACCTGTCGCGCCCGAGCCACAGTACAGCGAAAAT‑TTTCGTTACGCCGTTAAGCATACGCGGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:970535/239‑1 (MQ=255)
tgaTCCGGGACGTGTGCACCCACCATACGGCACAGCGAAACTGACGGCGAGAAACGGAAAAAGCGGTCTCGACCGAGCCACAGTCCAGCGAAAAA‑TTTCTGTACGCCAGTAAGCAGACGCAGCGGCGGGTTCAGTTGGCCTTTTT‑CCCGCCCCGGCGCGC‑GGCC‑AACCATC‑CCCGACGCTGGCACCAGCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:1088057/237‑1 (MQ=255)
taaccggtgccgggTTAACCCGCCATACGGCGCAGCGAAACGTACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCGCAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:789170/233‑1 (MQ=255)
gagcagcgacgtgGTCGTCCGCCATGCGGCGCGACGAAACTGGCGGCGAGAAACGCGCAACACTGGGGGGACCGGGCCGAAGTACAGCGAAAAA‑TTTCTGGACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCATTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCGGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGaa < 2:34262/229‑1 (MQ=255)
aTCCGGGCCGTTTTAGCCCGCCATACGGCGCAGCGAAGCTGACGGCGAAAACAGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACa < 2:838995/239‑1 (MQ=255)
tgccgtgTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CTCGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGGGCAAATCGAGATAGTCGTGGGACAGCTTa > 1:1217878/1‑239 (MQ=255)
gccgtgTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCCGCGCCC‑GCCC‑CAACATC‑ACCGCCACCGGCACCATCTCCCCCCCCCCATTTTGGGTGCCACGGCGGCAACCGAGATAGTCGTGGGACAGCCTaa > 2:129079/1‑239 (MQ=255)
gtTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑TACGCCCCCGCGCGC‑CACC‑CAAAATA‑ACCGACCCTGGCACCCCCCCCCCCACCCGATTTGGGTTGCTTCCGTGCAAAAAGCGAAAGTCGTgggaattgctcttctac > 2:559598/1‑224 (MQ=255)
gtTCATCCGCCATACGGCGCAGCAAAACTGACGGCGAGAAACGCACAAAACGGCCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGGGGCGGGTTCACTTCGCCTTTTG‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGAc < 1:1093365/239‑1 (MQ=255)
ttCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGAc < 1:885972/238‑1 (MQ=255)
tCATCCGCCATGCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGAct < 1:1159545/238‑1 (MQ=255)
aTCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCCCTTCCCCTTTTT‑TACGCCCCCGCGCGC‑GACC‑CAACATC‑ACCCACACCGGCACCCTCTCCACATCCCCATTTGGGGAGGTAACGTGCGAATAGCGATAGTCGGTGAACAACTTAAATAACtctt > 2:1410055/1‑239 (MQ=255)
ccGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTTGCCTTTTT‑TACGCCCCCGCGCGC‑GACC‑CAACATC‑ACCGGCACCGGCACCCTCTTCCCATCCCCATTTTGGGTGCTACGGGGCCAATCGAGATAGTCGGGGAACAGCTTAAAAAACtcctct > 1:278446/1‑239 (MQ=255)
ccATACTGCGCAGCGAAACTGACAGCGAGAAACGCACAAAACAGTCGCTACCGAGCCACAGTACAGCGAAAAC‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGATTCCTTTGCCGCTTT‑TTCGGCCCCGCTCGC‑GGCC‑CTACATCAACCGACCCTTCCA‑CACCTCTACACCCCGACTTGGATTGCTTCGGTGCCAATCGAGATAACCGCTGACACGTTTAATAGACCCTTCttt > 2:5728/1‑238 (MQ=255)
aTACGGCGCAGCGAAGCTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCgg < 1:412119/239‑1 (MQ=255)
aTACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCgg < 1:500569/239‑1 (MQ=255)
aTACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGCCCTTTT‑TTCCCCCCGGCGCGC‑GGCC‑AAACATC‑ACCCACCCTGGCACCCACCTCCCACCCAGATTTTGGTTGCTTCCGGGCAAATCGAGATAGTGGTGGGACAGCTTAATAAACACTTCTTTTgg > 2:1479587/1‑239 (MQ=255)
aCGGCGCAGCGAAACTGACGGCGAGAAACGCAAAAAACGGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCg < 1:482940/239‑1 (MQ=255)
aCGGCGCAGCGAAACGGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCg < 1:868270/239‑1 (MQ=255)
cgcAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACCTCGCCTTTTT‑CACCCCCCCGCCCGC‑GACC‑AAAAAAC‑AACCGCACCGGCCCCCCCCTCACAACCACACTTGGGGTGCTTCGGTGCAAACCCAGATAATCGTGGGACCGCTTAATAGCATCTTTTTTCTGCGTGTa > 2:1382704/1‑239 (MQ=255)
aGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑TACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCCGATTTTGGTTGCTACGGGGCAAATCGAGATAGTCGTGGAACAGCTTAATAAACTCTTCTTTTGGCGTGTAATa > 1:1432040/1‑239 (MQ=255)
cGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTTACTTCGCCTTTTT‑TACGCCCCCGCGCGC‑GACC‑CAACATC‑ACCGACACTGGCACCCTCTGCACATCCAGATTTTGGGTGCTACGGTGCAAATCGAGATAGACGGGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTGATAgg > 1:426682/1‑239 (MQ=255)
gAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAgg < 1:1286181/238‑1 (MQ=255)
aaaaacCTGCCCCGACCGAGCCACAGAACAGAAAAAAT‑TTTTTTGCCCCCGTAAAGCATCCGCGGCGGGGGTTTCCCTCCGCTTTTTC‑CCCCCCCCGGCGCCC‑GACA‑AAACATC‑CCCGACACGGGCACCATCTGCACACCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGTTTAATAGACTCTTCTTTCGGCGTGAAATAGGTGAACACCCGCGGCCCGCCGtg < 2:556543/237‑1 (MQ=255)
aaCTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACAt < 1:639408/135‑1 (MQ=255)
gACCGGGCCACAGTACAGCGAAAAA‑TTTTTGTACGCCTTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAg < 1:282692/239‑1 (MQ=255)
gccGAGCCACAGTACAGAAAAAAT‑TTTTTGTCCCCGGTTAAGCATCGGCGGGGGGGGTTTCCCTTCCCTTTTTC‑CCCGCCCCGGCGCGC‑GAAA‑AAACATC‑CCCGACCCGGGCACCATCTGCACATCAAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACCCACGCGGCCCGCCGTGAATGAACACATAg < 2:1331567/237‑1 (MQ=255)
aCCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTTGCCTTTTT‑CACGCCCCCGCCCGC‑GACC‑AAAAATC‑ACCGACACCGGCACAATATGCACAACCAGCATTGGGTTGCTCCGGGGCAAAACGAGATAGTGGTGGGACAGCTTAATAGAGCCCTCTTTCGGCGGGTAAAATGTGAACAAACCCGGCCCCGCGCGGATGAAACCATAg > 2:175532/1‑238 (MQ=255)
cgagcccacgTACAGAGAAAAATTTTTTGGCCGCCGTAAAGAATCGGCGGGGGGGGGTTCCTTCCGCTTTTTT‑CACCCCCCGCGGCG‑‑GACCAAAACACC‑ACCGACCAGGGCACAATCTGCACATCCAGATTGGGGTTGCTACGTGGCAAATGGAGATAGTGGTGAAACAGTTTAATAGACTCTTCTTTCGGCGTGAAATAGGGGAACACACGCGGCCCGCCGTGAATGAACACATAgcg < 2:1148883/230‑1 (MQ=255)
gAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCCCTTCGCCTTTTT‑CACCCCCCCGCGCGC‑GCCC‑AAACATC‑ACCCACACCGGCACCCTCCTCACATCCAGAATTGGGGTGCTTCGGGGCAAATCGAGATAGACGTGGGACAGCTTAATAGACTCTTCTTTCTGCGGGTAATAGGGGAAAAAACACGGGCCCCCCTGAATTAacaacaaacgcc > 2:501511/1‑230 (MQ=255)
aGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCCTCTGCACATCCAGATTTTGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGGGTAATAGGTGAACACACCCGGCCCGCCGCGAATGAACACATAGCGCGGCAGTAGCggg > 1:537349/1‑236 (MQ=255)
aGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGGTGCTAATGTGCAAAACGATATATTCTTCTATTCGCGTTATAGACTCTTCTTTCGGCGGGTAATAGGGGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGGAGCGTg > 1:900844/1‑238 (MQ=255)
cGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑TACGCCCCCGCGCGC‑GACC‑AAACATC‑ACCCACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAAACGAGATAGTCGTGGAAAAGCTTAATAGACTCTTCTTTCTGCGGGTAATAGGGGAAAACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCg > 1:954243/1‑239 (MQ=255)
aGCATACGCAGCGGCGGGTTCACTTCCCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCCACCCCGGCCCCATCTTCACATACCGATTTTGGTTGCTACCGGGCAAATCGCGATAGTCGGGGGACAACTTTATAGACCCTTCTTTTGGCGTGTAATAAGTGAACAAACGCGGCCCCCCGGGTATGAACACACAGCGCGGCAGGAGCGTGCCGGCgcgtttcacgggggctcacgg > 2:565704/1‑219 (MQ=255)
cATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCttt < 1:1042940/147‑1 (MQ=255)
atccGCAGCGGCGGGTTCCCTTCCCCTTTTC‑CACCCCCCGGCGCGC‑AACA‑AAACATC‑CCCGACACTGGCCCCATCTGCACATCCAAATTGGGGTTGCTACGGTGAAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGt < 1:35781/235‑1 (MQ=255)
aacccccgcggcgGGTTCCCCTGCCCTTTTTCCCCCCCCCGGCGCGC‑GCCA‑AAACACC‑CCCGACACTGGCCCCATCTGCACATCAAGATTGGGGTGGCTCGGGTGAAAATCGAGATAGTCGTGAAACAGCTAAATAGACTCTTCTTTCGGGGTTTAATAGGTGACCACCCGCGGCCCGCCGTGAATGAACATATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGt < 2:1217878/232‑1 (MQ=255)
ttCACTCCGCTTTTTC‑CCCGCCCCGGCGCGC‑GCCC‑AAACACC‑CCCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTCCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGc < 1:1483273/239‑1 (MQ=255)
|
ATCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTG‑CATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTT‑CACGCCCCGGCGCGC‑GACC‑AAACATC‑ACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGC > NC_000913/4255821‑4256282
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
