Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F110 I1 R1	11	49.5	1781824	94.3%	1680260	142.4

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,936,308	C→T	V3I (GTA→ATA)	zwf ←	glucose‑6‑phosphate 1‑dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,936,308	0	C	T	98.4%	194.2 / NA	63	V3I (GTA→ATA)	zwf	glucose‑6‑phosphate 1‑dehydrogenase
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (31/31); minor base G (0/1); total (31/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

CTACGCCGATAATCCGGGTGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAA  >  NC_000913/1936170‑1936447

cTACGCCGATAATCCGGATGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGcc                                                                                                                                         <  2:195579/143‑1 (MQ=255)

cTACGCCGATAATCCGGATGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGcc                                                                                                                                         <  2:417447/143‑1 (MQ=255)

       gATAATCCGGGTGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACCGGCCTGGGCTGTTTGCGTTATCGCCagggcca                                                                                                                                  >  1:339999/1‑137 (MQ=255)

       gATAATCCGGGTGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCAt                                                                                                                                  >  1:253210/1‑143 (MQ=255)

            tCCGGGTGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTcc                                                                                                                             <  2:495332/143‑1 (MQ=255)

            tCCGGGTGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTAATAACGACAATTCAATAAATTATTACGCGTTGGTGCACCGCGCGCGCCGAAAATGAACAGGTCACGGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTcc                                                                                                                             >  2:886087/1‑143 (MQ=255)

             ccGGGTGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGAGCTGTTTGCGTTATCGCCAGCTCATTGTCCt                                                                                                                            >  2:576977/1‑143 (MQ=255)

                ggTGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTaa                                                                                                                         <  2:133684/143‑1 (MQ=255)

                     ccGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTtaa                                                                                                                    >  2:851950/1‑143 (MQ=255)

                        ggTTGAGCTGACCGGCTTTTTCCAGTCGATACACGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTtaacta                                                                                                                 <  2:28770/143‑1 (MQ=255)

                         gTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTGAGTtaactaa                                                                                                                >  2:753644/1‑143 (MQ=255)

                          ttGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTCAGTtaactaac                                                                                                               >  2:254123/1‑143 (MQ=255)

                             aGCTGACCGGCTCGTTGCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCg                                                                                                            <  1:710736/143‑1 (MQ=255)

                               cTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGt                                                                                                          >  2:180035/1‑143 (MQ=255)

                                   ccGGCGTTTTCCAGTTGAGACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGTGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACtt                                                                                                      <  1:612415/143‑1 (MQ=255)

                                    cGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTa                                                                                                     >  2:310904/1‑143 (MQ=255)

                                     ggCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTaa                                                                                                    >  2:507453/1‑143 (MQ=255)

                                     cgcttcctCCAGTTGATACAGGGAAGGCAGCAATTTCCGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTaa                                                                                                    <  2:339999/136‑1 (MQ=255)

                                         cttcccAGTTGATACAGCGAAGGCAGCAATCTACGACGCGCAAGGTCGCCCTTCGCGCCGAAAATGACCAGGTCACAGCCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCa                                                                                                <  2:673003/139‑1 (MQ=255)

                                          tttCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCAAg                                                                                               >  1:851247/1‑143 (MQ=255)

                                           ttCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAgg                                                                                              <  2:807844/143‑1 (MQ=255)

                                             ccAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGGTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGt                                                                                            >  2:509678/1‑143 (MQ=255)

                                               aGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGtat                                                                                          >  2:15958/1‑143 (MQ=255)

                                                 ttGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGGCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTGAGTTACCTAACCCGCTCCTTAAGCCAGGGgatcc                                                                                        >  1:750614/1‑141 (MQ=255)

                                                   gATACAGGGAAGGCAGCAATTGACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACtt                                                                                      <  2:437600/143‑1 (MQ=255)

                                                     tACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGt                                                                                    <  2:172427/143‑1 (MQ=255)

                                                         gttatggctgtattttACGACTTGCAAGTTAGCTTTTAGCTCCGAAAATGACCAGGTCACAGGCCGGGGCTGGCTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAAtt                                                                                <  2:497815/130‑1 (MQ=255)

                                                         gggAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTACCCCGGTACTTAAGCCCggcgtttcttttggtc                                                                                >  2:116842/1‑129 (MQ=255)

                                                            aaGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTCAGCCCGGGCGTCCTTGTCATTTTc                                                                             >  2:12571/1‑143 (MQ=255)

                                                            aaGGCAGCAATTTACGACGCGCAAGGTCGCCTTGCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGGCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTc                                                                             <  1:162229/143‑1 (MQ=255)

                                                            aaGGCAGCAAGGTACGACGCGCAAGGTCGCGTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTGGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTc                                                                             <  1:243214/143‑1 (MQ=255)

                                                             cggCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCTTGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCt                                                                            <  2:374068/142‑1 (MQ=255)

                                                                 agcaATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTTCCTTCTCGCCATGTCATTCTCCTTCAGTTAACTAACCCGGTCCTTAAGCCATGGAATACTTGTAATTTTCTTACg                                                                        >  1:603352/1‑143 (MQ=255)

                                                                   cagtggccgcggcgcAGGGCAGCCCTTCGCGTCGAAAATGACCCGGCCACAGGCCTTGGCTGTTTGCGTTAGCGCCATGTCATTCTCCTTAAGTTATCTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGt                                                                      <  1:665840/132‑1 (MQ=255)

                                                                      tttACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGACTACTTGTAATTTTCTTACGGTGCa                                                                   >  1:715871/1‑143 (MQ=255)

                                                                           gacgCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTa                                                              <  2:100413/143‑1 (MQ=255)

                                                                                gcAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCt                                                         >  1:488858/1‑143 (MQ=255)

                                                                                  aaGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCttt                                                       >  2:523449/1‑143 (MQ=255)

                                                                                   aGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATCCTCCTTAAGTTAACTAACCCGGTACTTAAGCAAGGGTATACTTGTCATTTTCTTACGGTGCACTGTACTGCtttt                                                      <  2:655931/143‑1 (MQ=255)

                                                                                     gTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTAc                                                    >  1:129018/1‑143 (MQ=255)

                                                                                     gTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTAc                                                    <  1:180035/143‑1 (MQ=255)

                                                                                      tCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACg                                                   >  1:60894/1‑143 (MQ=255)

                                                                                      tCGCCTTTCGCGCCGAAAATGACCACGTCACAGTCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACg                                                   <  2:28260/143‑1 (MQ=255)

                                                                                      tCGCCTTCCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATTGCCATGTCATTCTCCTTAAGTTATCTAACCCGGTACGTAAGCCAGAGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACg                                                   <  1:14710/143‑1 (MQ=255)

                                                                                            ttCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTg                                             >  1:156961/1‑143 (MQ=255)

                                                                                                  ccGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGaaaa                                       <  1:843174/143‑1 (MQ=255)

                                                                                                  ccGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGCTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGaaaa                                       <  2:448775/143‑1 (MQ=255)

                                                                                                  ccGAAAATGACCAGCTCACAGGCCTTGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGaaaa                                       <  1:3243/143‑1 (MQ=255)

                                                                                                      aaaTGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGt                                   >  1:111791/1‑143 (MQ=255)

                                                                                                         tGACCAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTGACTAACCCGGTACTTACGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTGACGCGCTTGACAAAAcgcgaaa                                >  1:490952/1‑137 (MQ=255)

                                                                                                          gACCAGGTCACAGGCCTGGGCTGCTTCCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAAc                               <  2:633346/143‑1 (MQ=255)

                                                                                                            ccAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAATGc                             <  1:851950/143‑1 (MQ=255)

                                                                                                             cAGGTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCt                            >  2:436292/1‑143 (MQ=255)

                                                                                                               ggTCACAGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTa                          <  2:458113/143‑1 (MQ=255)

                                                                                                                gccacaGGCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATCCTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTAt                         <  2:40114/141‑1 (MQ=255)

                                                                                                                       gCCTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTCCTTAAGCCAGGGTATACTTGGAATTTGCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCg                  >  2:166267/1‑143 (MQ=255)

                                                                                                                         cTGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGTACACGAATTACGCTTATCCACCCGTg                >  1:346985/1‑143 (MQ=255)

                                                                                                                          tGGGCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGc               <  1:841419/143‑1 (MQ=255)

                                                                                                                            ggCTGTTTGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGa             >  2:629449/1‑143 (MQ=255)

                                                                                                                                 tttGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCCGGGTATACTTGTACTTTTCTTACGGTGCACTGTACTGATTTTACGCGCTTGCGAAAACTGTAAACGCTTATCCAGCGGTGCGCTTACg        >  2:352854/1‑143 (MQ=255)

                                                                                                                                 tttGCGTTATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGGGAAAATTGTAAACGATTATACaatattaatattaag        >  2:832312/1‑129 (MQ=255)

                                                                                                                                 gttGCGTTATCGCCATGTCATTCTCCTTAGGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACg        <  1:640265/142‑1 (MQ=255)

                                                                                                                                       ttATCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGaaaa  <  2:71018/143‑1 (MQ=255)

CTACGCCGATAATCCGGGTGTCCGGGTTGAGCTGACCGGCTTTTTCCAGTTGATACAGGGAAGGCAGCAATTTACGACGCGCAAGGTCGCCTTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAA  >  NC_000913/1936170‑1936447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A