Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F9 I0 R1 80 116.8 2384848 97.0% 2313302 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,630,341 A→C 20.2% G61G (GGT→GGG)  ettA ← energy‑dependent translational throttle A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,630,3410AC20.2% 247.7 / 10.3 106G61G (GGT→GGG) ettAenergy‑dependent translational throttle A
Reads supporting (aligned to +/- strand):  ref base A (54/25);  new base C (2/21);  total (57/49)
Fisher's exact test for biased strand distribution p-value = 3.44e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 107 total aligned reads displayed.

AGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTT  >  NC_000913/4630105‑4630562
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                              
aGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCa                                                                                                                                                                                                                                >  2:862130/1‑237 (MQ=255)
    tATGACCGTCGTGAGCCTGAATTATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  2:158902/239‑1 (MQ=255)
    tATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  1:831338/239‑1 (MQ=255)
    tATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  2:295411/239‑1 (MQ=255)
    tATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  1:1012884/239‑1 (MQ=255)
    tATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  1:466668/239‑1 (MQ=255)
    tATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  2:977932/239‑1 (MQ=255)
    tATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAAGCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  2:1047585/239‑1 (MQ=255)
    tATGACCGTCGTGAGCCTGAATGATCGCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTTAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  2:898713/239‑1 (MQ=255)
        aCCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGTTGTCTGGCTGCGGACGC‑GCTTCACCTTCGATg                                                                                                                                                                                                                       >  1:102906/1‑238 (MQ=255)
            tcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCttt                                                                                                                                                                                                                  >  2:466831/1‑239 (MQ=255)
            tcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCttt                                                                                                                                                                                                                  >  2:180006/1‑239 (MQ=255)
            tcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCttt                                                                                                                                                                                                                  >  1:596216/1‑239 (MQ=255)
            tcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCttt                                                                                                                                                                                                                  >  2:410221/1‑239 (MQ=255)
            tcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCttt                                                                                                                                                                                                                  >  2:70247/1‑239 (MQ=255)
            tcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGACAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTAGATGTCttt                                                                                                                                                                                                                  >  1:177828/1‑239 (MQ=255)
            tcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGCGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCttt                                                                                                                                                                                                                  >  2:913257/1‑239 (MQ=255)
            tcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATAAACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTCCGGCAGATAACCCATCTTGATGTCTGGCTGCGGACGC‑GCTTCCACTTCGATGTCttt                                                                                                                                                                                                                  >  2:242288/1‑239 (MQ=255)
                       aaTGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  2:1049401/220‑1 (MQ=255)
                       aaTGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          >  1:1049401/1‑220 (MQ=255)
                       aaTGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGccc                                                                                                                                                                                                       >  2:1023413/1‑238 (MQ=255)
                       aaTGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGccc                                                                                                                                                                                                       >  2:336210/1‑238 (MQ=255)
                       aaTGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGccc                                                                                                                                                                                                       >  2:424303/1‑238 (MQ=255)
                       aaTGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGccc                                                                                                                                                                                                       >  2:1088126/1‑238 (MQ=255)
                              tctTCCAGACGACCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACAACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGCTAACCAATCTTGATGTCTGGATGCGGACGC‑GCTTCGCCTTCGATGTCCTT‑ATCAATGCCCCCCACAAt                                                                                                                                                                                               >  1:946852/1‑239 (MQ=255)
                                 tCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATgc                                                                                                                                                                                             >  2:591207/1‑238 (MQ=255)
                                       cGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGcagcag                                                                                                                                                                                      >  2:456879/1‑239 (MQ=255)
                                        ggCGTTGTTCTGCGGCCAGCTTGAAAAAAGCGGCATCGGAGCCGGCGAACAGCGCATCCCTTCCACCCGGG‑CGTTTCG‑GGGCGTTAACCCCTTTTGAAC‑CCGCTTCTTCAATGGACTCCCGCACGGTGTGTCCCGGGTTCAGGTGCGGTTCCGGCGGCAGATACCCATTTTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAgg                                                                                                                                                                                     <  1:1188530/239‑1 (MQ=255)
                                          ccTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCgcag                                                                                                                                                                                         >  2:90490/1‑233 (MQ=255)
                                          ccTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGt                                                                                                                                                                                   >  2:1179115/1‑239 (MQ=255)
                                          ccTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGt                                                                                                                                                                                   >  2:384681/1‑239 (MQ=255)
                                          ccTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGt                                                                                                                                                                                   >  2:641672/1‑239 (MQ=255)
                                                    cGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTAccc                                                                                                                                                                         >  2:816703/1‑239 (MQ=255)
                                                     gcccacttgttaaaaaCCGGCCTCCGGACCGGGTAACCGCGCTACCCCTTCACCCGGC‑CGTTTCA‑GGGCGTTAACCCCTTCTAAAA‑CCGCTTCTTCAATGGACTCCCGCAGGGTGTGTCCGGGGTCCAGCTGCGGTTCCTGGGGCAGATAACCATTCTTGATGTCTGGCTGCGGCCGC‑GCTTCCCCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTAc                                                                                                                                                                           <  1:1023413/224‑1 (MQ=255)
                                                       ccgttttGTCAAAATCGCAATCCGGTTCGCCGTACAGCTCATACATTTCATCCGGG‑TGTTACG‑GGCCGTTAACCACGTGTGAAC‑CCGCTTTTGAAAGGTACCCACGCACGGTGTGCTCGGGCTTCAGCCGCGTTTCCTGCGGCAGATATCCATTTTTGCTGTCTGGCGGCGGACGC‑CTTTCACCTTCGATGTCTTT‑AGCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCcgcg                                                                                                                                                                      <  1:1100911/234‑1 (MQ=255)
                                                       ccagctgtccAAAACCGGCAGCCGGATCGGCGTACAGCGCATCCTCTTCATCCAGG‑CGTTTCG‑GGGCGTCAACCCCTTCTGAAC‑CCGCTTCTTCAATGGACCCACGCACGGTGTGTCCCGGGTTCAGCTGCGTTTCCTGCGGCAGATAACCATTCTTGATGTCTGGCTGGGGGCGC‑GCTTCACCTTCGTTGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCcgcg                                                                                                                                                                      <  1:1153786/230‑1 (MQ=255)
                                                         aGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCCCCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGcc                                                                                                                                                                    >  2:1100911/1‑239 (MQ=255)
                                                         aGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGcc                                                                                                                                                                    >  2:1161999/1‑239 (MQ=255)
                                                                     cggtacccggggccGGCGTCCAGCG‑ATACCCTTTCACCAGGTCGTTACG‑GGGCGTAACCCACTGCTGAAA‑CCGCTTCTCCAAGGCACCCACCCCCGGTGTGTCCGGGGTTCGGCCGGGGTCCCTGCGGCAGATACCCATTTTTGATGCCTGGCTGCGGACGC‑GCTCCCCCTTCGATTTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAg                                                                                                                                                        <  1:862130/226‑1 (MQ=255)
                                                                           ccgggtccgacGTCCAGCCCTTACCCTTCAACCAGG‑‑GTTTCAGGGGCGTAACCCCCTTCTAAAC‑CCGTTTCTCCAAGGGCCCCCCGCACGGTGTGTTCCGGTTTCAGCTGCGGTTCCTGCGGAAAATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCCCCTTCGTTGTCTTT‑ACCAAGGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACAcc                                                                                                                                                  <  1:1088126/229‑1 (MQ=255)
                                                                            cgggAGCGCCGTACAGCGCATACACTTCACCCAGG‑CGTTTCA‑GGGCGTTACCCACTTCTGAAA‑CCGCTTCTTCAAGGGCCTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCGGGCGGCGGCCGC‑GCTTCCCCTTCGATTTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCa                                                                                                                                                 <  1:336210/237‑1 (MQ=255)
                                                                                   ggCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAAttttt                                                                                                                                           >  2:512323/1‑238 (MQ=255)
                                                                                       tACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGccc                                                                                                                                       >  1:626492/1‑238 (MQ=255)
                                                                                            cgcATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCCGGga                                                                                                                                 >  1:483829/1‑239 (MQ=255)
                                                                                            cgcATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGga                                                                                                                                 >  2:390244/1‑239 (MQ=255)
                                                                                              ccaaccccttctcccgggggTTTCG‑GGGCTTTACCCACTCCTGAAC‑CCGCTTCTTCAATGGCCCCCCGCCCGGTGTGTTCCGGGTTCAGCTGCGTTCCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GTTTCCCCTTCGTTGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGgaa                                                                                                                                <  1:118766/220‑1 (MQ=255)
                                                                                               ctACCCTTCATCCAGT‑CTTTCCA‑GGGCTTTAACCTCTTCTGAAC‑CCGTTCCTTCAATGGACCCCCGCTGGGTGTGTTCGGGGTTCAGCTGCGGTTCCTGCGGCAGATAACAATTCTTGAGGTCTGGCTGCGGACGC‑TCTTCCCCTTCGATGTCTTT‑ATCAATCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGgaaga                                                                                                                              <  1:1134040/238‑1 (MQ=255)
                                                                                               atcccctcctgccAGG‑GTTTTCG‑GGGCGTTACCCCCTTCTGAAC‑CCGCTTCTTCAATGGCCTCCCGCCCGGTGTGTTCCGGGTTCGGCGGCGGTCCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGCCGC‑GCTTCCCCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGgaaga                                                                                                                              <  1:816703/228‑1 (MQ=255)
                                                                                               aTACCCTTCATCCAGG‑CGTTTCA‑GGGCGTTACCCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATACCCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCCCCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGgaaga                                                                                                                              <  2:1026720/239‑1 (MQ=255)
                                                                                                    cTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGACA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCCGCGGCCGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGACATTCAGACCCAGGACAACAATTCTTGCCCCAGGGAAGAACCTc                                                                                                                         >  1:222585/1‑239 (MQ=255)
                                                                                                     tccacccAGG‑CTTTTCA‑GGCCGTCACCCCCTTCTGAAC‑CCGCTTCTTCAATGGCCTCCCGCCGGGTGTGTCCCGGTTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGTTGTCTGGCGGCGGCCGC‑TCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCa                                                                                                                        <  1:523568/234‑1 (MQ=255)
                                                                                                      tCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCag                                                                                                                       >  2:1079777/1‑239 (MQ=255)
                                                                                                      tCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCag                                                                                                                       >  1:1021443/1‑239 (MQ=255)
                                                                                                                cGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGtt                                                                                                              >  1:1052958/1‑239 (MQ=255)
                                                                                                                   ttCG‑GGGCGTTACCCCCTTCTGAAC‑CCGCTTCTTCAATGGACTCCCGCACGGTGTGTCCCGGGTTCAGCTGCGTTTCCTGCGGCAGATACCCAATCTTGATGTCTGGCGGCGGCCGC‑GCTCCCCCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCgca                                                                                                                                                                                          <  1:984777/160‑1 (MQ=255)
                                                                                                                     ttcgggtctttaccctctCTGAAACCCGTTTCTTCAATGGCCCCCCGCAGGGTGTGTTCCGGTTCCAGCGGCGGTCCCTGCGGCAAAAAACCAATCTTGATGTCTGGCTGCGGAGGC‑GCTTCACCTTCGTTGTTTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGttttt                                                                                                           <  1:643030/222‑1 (MQ=255)
                                                                                                                     cA‑GGGCTTTAACCATTTATAAAC‑CCGCTTGTTAAATGGCACCCCGCACGGTTTGTGCCGGGTTCAGCTGCGGTTCCGGCGGCAGATAACCAATTTTGTTTTCTGGCGGCGGACGC‑TCTTCCCCTTCGATGTCTTT‑ATCAAGGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCa                                                                                                         <  1:478381/239‑1 (MQ=255)
                                                                                                                              tAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGa                                                                                                                                                                                >  2:984777/1‑160 (MQ=255)
                                                                                                                                aCCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACg                                                                                               >  2:478381/1‑239 (MQ=255)
                                                                                                                                       cTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGCGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCCATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTcggc                                                                                        >  1:174947/1‑239 (MQ=255)
                                                                                                                                          aaa‑CCGCTTCTTCAATGTACTCACGCACGGTGTTTTCCGGGTTCAGCTGCGATTCCTGCGGCATATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCg                                                                                                                                                                                                                          <  1:722522/107‑1 (MQ=255)
                                                                                                                                                gattcttcAATGGACTCACGCACGGTGTGTTCCGGGTTGAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGTGCCATTCGGACCCATGACACCAATTTATGCCCCAGGGACGAAACTCAGAGAGATGTTTTTCAAAATATTACGTTTCGGCAGaaaa                                                                                  >  1:817689/3‑235 (MQ=255)
                                                                                                                                                  ttcttcAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACtt                                                                              >  2:614710/1‑239 (MQ=255)
                                                                                                                                                         agggcgtcccgcacgGTGTTGTCCGGGTTAGGGTGGGGTTCTGGCGGAAGAAAACCAATCTTGTTGTCTGGCGGCGGCCGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGac                                                                       <  1:371184/230‑1 (MQ=255)
                                                                                                                                                          tGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGCCGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGaca                                                                      <  2:596216/239‑1 (MQ=255)
                                                                                                                                                            gACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGAAACg                                                                    >  1:441550/1‑239 (MQ=255)
                                                                                                                                                                 atgctgggtttttccctggTCCAGCGGCGTTACCCGCGGGACAAATCCAATTTTGATTTCGGGCTGCGGACGA‑CCTTCCCCTTGTATTTTTAT‑ACAAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTCTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa                                                               <  2:846725/222‑1 (MQ=255)
                                                                                                                                                                 acgcgcgTTGTGCTCGTGGTTCAGCTGGGGTCCCGCCGGCAGAAACCCAATCTTGATGCCTGGCTGCGG‑CGCGGCTCCCCGTTGGATGTCTTT‑ACCAATCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa                                                               <  1:348461/239‑1 (MQ=255)
                                                                                                                                                                 acgcactGTGTGTTCCGGGTTCAGCTGCGGTGCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCCCCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa                                                               <  2:1153634/239‑1 (MQ=255)
                                                                                                                                                                 acgcacgGTGTGTTCCGGGTTCAGCGGCGGTTCCTGCGGCAGATAACCAATCTTGTTGTCTGGCTGGGGACGC‑GCTTCACCTTCGATGTCTTT‑ACCAAGGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa                                                               <  2:102906/239‑1 (MQ=255)
                                                                                                                                                                    cgcgtggtgtCCGGGGTACGGCGGCGTCTCCGGCGGCAGATATCCATTCTGGATGTCGGGGTGCGGTGGC‑CCTTATGTTTTGATTTCTTT‑TCAAACGCCCGCCATAATGCGCAGCAGGGTGGACTGACCCGCGCCATTCAGACCCAGGACACCAAGTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTGTGCCGACACGATGCa                                                               <  1:337848/230‑1 (MQ=255)
                                                                                                                                                                      cgGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATgg                                                            >  1:1184493/1‑237 (MQ=255)
                                                                                                                                                                       ggTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACCACTTTGCCGACACGATGCATGGtct                                                         >  2:868963/1‑237 (MQ=255)
                                                                                                                                                                          gtgtTCCGGGTGCCGCTGGGCTCCCTGGGACAGATAACCATTCTTGATGTCTGGCTGCGGACGC‑TCTTCTCTTTCGATCTTTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCAATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATaa                                                       <  1:512890/238‑1 (MQ=255)
                                                                                                                                                                           tgtTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAAc                                                     >  2:623736/1‑239 (MQ=255)
                                                                                                                                                                               ccGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAAt                                                 >  2:315519/1‑239 (MQ=255)
                                                                                                                                                                                 gggTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTg                                               >  2:395775/1‑239 (MQ=255)
                                                                                                                                                                                   gatCAGCTGCGGATCCTGCGGCAGATAAACAATCTTGATGTCTGGCTGTGGACGC‑CCTTCACCTTCGATGTCTTT‑ATCAATGCGCGCCATAATGGGCAGCAGGGCGGCCTTATCCGCGCCATTCAGGACCAGGGCACCAATTTTTGCCACAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATCACGTATAGGCGGGACAAATTTGCCGACAAGATGCATGGTATAAATGACTTGa                                              >  1:876969/3‑238 (MQ=255)
                                                                                                                                                                                   gTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGCCTGCGGACGC‑GCTTCAACTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGAGCCAGGACACCAATTTTTGCCCCAGGGAAGAACCTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGGACAAGTTTGCCGTCACGATGCCTCGTATAAACTAATTGAg                                             >  1:524499/1‑239 (MQ=255)
                                                                                                                                                                                    ttCCGCTGCGGTTCCGGCGCAAGATAACCATTTTTGATGTCGGGCGGCGGCCGC‑GCTTCCCCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAg                                             <  2:891401/238‑1 (MQ=255)
                                                                                                                                                                                    ttCAGCTGCGTTTCCGGCGGCAAATACCCTTTTTTGATGTCTGGCTGGGGCCGC‑GTCTCCCCTTCGTTGTCTTT‑ACCAACGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAg                                             <  1:641672/238‑1 (MQ=255)
                                                                                                                                                                                    ttCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAg                                             <  2:626492/238‑1 (MQ=255)
                                                                                                                                                                                    ttCAGCTGCGGTCCCTGCGGCAAATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCCCCTTCGATGTCTTT‑ACCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAg                                             <  2:979712/238‑1 (MQ=255)
                                                                                                                                                                                    gtCAGCTGTGGTTCCGGCGGTAGGTACCGAATCTTGAGGTCGGGCTGGGGACGC‑GTTTCACCTTCGATGCTGTA‑ATCAGTGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAg                                             <  1:315519/237‑1 (MQ=255)
                                                                                                                                                                                       aGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCAc                                         >  1:1123276/1‑239 (MQ=255)
                                                                                                                                                                                              gtataaaagaaacaaaaCCACTCGTGTGGTCGGGCGGCGGACGC‑GCTGCACCTTCGTTGTTTTA‑ATCATTCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGa                                   <  1:311463/223‑1 (MQ=255)
                                                                                                                                                                                                tCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGCCGC‑GCTCCCCCTTCGATGTCTTT‑ATCAATCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACtt                                <  2:946852/239‑1 (MQ=255)
                                                                                                                                                                                                 ccTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTc                               >  1:166015/1‑239 (MQ=255)
                                                                                                                                                                                                  gtGCGGCGGATACCCAATTTTGATCTCTGGCTGGGCCCCG‑GTTTCCCTTTCGTTGCTTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCg                              <  1:410221/238‑1 (MQ=255)
                                                                                                                                                                                                      cgaataagtccAAGCTTGGTCTCGGGCGGCGGCCGC‑GGTACGCGTGCGATGTCGTC‑ATGAGGGACCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTGCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCctc                          <  1:70247/230‑1 (MQ=255)
                                                                                                                                                                                                         gtaaaaCCATTCTTGAGGTCGGGCTGCGGACGC‑‑TTCTACCATGTGTGTTTTTAATCATTTCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCGCGTTGGACTTCGCctc                          <  1:424303/232‑1 (MQ=255)
                                                                                                                                                                                                              aCCAATCTTTATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTa                  <  2:1052958/239‑1 (MQ=255)
                                                                                                                                                                                                                catttttGGTGTCTGGCTGCGGACGC‑GCTTCACCTTGTATTTTTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATc                <  1:512323/234‑1 (MQ=255)
                                                                                                                                                                                                                  aTCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGt              >  2:807433/1‑239 (MQ=255)
                                                                                                                                                                                                                    cTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGa            >  2:64047/1‑239 (MQ=255)
                                                                                                                                                                                                                        aTGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCctct                         >  2:311463/1‑222 (MQ=255)
                                                                                                                                                                                                                         tggcTGGCTGCGGGCGT‑CCTTCCCCTCCGATGTTTTT‑ACAAACCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAAt        <  1:395775/235‑1 (MQ=255)
                                                                                                                                                                                                                             tGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGCCACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGtt   >  2:586268/1‑239 (MQ=255)
                                                                                                                                                                                                                             tGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGtt   >  2:968217/1‑239 (MQ=255)
                                                                                                                                                                                                                               gCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACCCGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGttt  >  2:1046489/1‑238 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                              
AGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGG‑CGTTTCA‑GGGCGTTAACCACTTCTGAAA‑CCGCTTCTTCAATGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGC‑GCTTCACCTTCGATGTCTTT‑ATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTT  >  NC_000913/4630105‑4630562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A