Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
90,671 |
T→G |
10.5% |
V193G (GTG→GGG) |
rsmH → |
16S rRNA m(4)C1402 methyltransferase, SAM‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 90,671 | 0 | T | G | 10.5%
| 325.7
/ 2.3
| 130 | V193G (GTG→GGG) | rsmH | 16S rRNA m(4)C1402 methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (40/64); new base G (22/4); total (62/68) |
| Fisher's exact test for biased strand distribution p-value = 2.20e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 130 total aligned reads displayed.
GGCTTTTCCTTTATGCGCGATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGCAGGGTTACCGATGACTGA > NC_000913/90436‑90902
|
ggCTTTTCCTTTATGCGCGTTGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACATAAGGTGAAGAGCCGTTTGCCAAACGCATTGCCCGGGCCATTGTCGAGGGTAACCGCGAACAGCCGGTGACCCCCCCCAACGAACGGCCGGAAG‑TCGTGACCG‑CTGCAACGACGGG‑Gaa > 2:344480/1‑239 (MQ=255)
ttttCCTTTATGCGCGATGGTCCGCTGGACATGCGTATGGACCCACCCCGTGGGCAGTCAGCCGCTGAATGGCTCAAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGa < 1:1022391/239‑1 (MQ=255)
ttCCTTTATGCGCGATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCGG‑CTGCAACGCCGGT‑GAAAGaaa > 1:1348830/1‑237 (MQ=255)
ttCCTTTATGCGCGATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAAAACTGGCGGAAG‑TCGTGGCTG‑GTGCAAAGCCGGG‑GAAAGATa > 1:1107214/1‑239 (MQ=255)
tGCGCGGTGTTCCGCTGGTATCGCGTATGCACCCCACCCGTGGGCAGTCAGCCGGTGAATGGCTAAAACCCGCAGAAGAAGCCTATAGCGCCTGGGTTTTGAAAACCTAGGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTaaa < 2:477718/239‑1 (MQ=255)
cgcgcGATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGGATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCCCGAACAGCCGATGACCCCCCCCAAAAAACGGGCGGAAG‑ACGTGGGCG‑CGGCAAACCCCGG‑GAAAGAAAAATTTaaa > 2:874064/2‑239 (MQ=255)
gATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAAAGCCGGT‑GAAAGATAAGATTAAAAATc > 1:919223/1‑238 (MQ=255)
gTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGa < 1:537983/220‑1 (MQ=255)
cGCTGGACAGGCGTAGGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGAc < 1:1367983/238‑1 (MQ=255)
tGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGt < 1:955218/239‑1 (MQ=255)
ggctggcctttGGCCCCAACCCGGGGGCAGCCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTAc < 2:1348830/229‑1 (MQ=255)
cATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑GCTGGGCTC‑GTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCggccc > 1:602302/1‑234 (MQ=255)
tGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGGATTGAAACCCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAACAACAGGCGGAAGCCCGGGGGCG‑C‑GCAAAGCCGGTCGAAAGA‑AAGTTTAAACAACCCCCGAcccaacccccccacgca > 2:427544/1‑225 (MQ=255)
aCCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGt < 1:970509/238‑1 (MQ=255)
aCCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGt < 1:1079984/238‑1 (MQ=255)
aacggccgggggggAGTCAGCCGGGGAAAGGCTAAAAACCGCAGAAGAAGCCGAAAACGCCTGGGTATTGAAAACCTTGGGGGAAGAGGGTTTTGCCAAACGCATTGCCCGGGCCATTGTCGGGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGt < 2:58618/227‑1 (MQ=255)
ccAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTGTTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCCAAGAACCGGCGGAAA‑TCGTGGCAG‑GTGCACCGCCGGG‑GGAAGAAAAGATTAAAAAACCCCCGACCCGCACCCTCCCGgggggggg > 2:289173/1‑235 (MQ=255)
aaCCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCCTTGCCCGCGCCATTGTCGAGCGTAACCGCGACCAGCCGATGACCCGCACCAAAGACCCGACGGAAG‑TCGGGGCTG‑CTGGAAAGCCGGT‑GAAAGAAAAATTTAAACAAACCGCGACCCGGACCGTCCCGGCGGGGGGCa > 2:1083475/1‑239 (MQ=255)
aaCCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCCCCAAAGAACTGGCGGAAG‑CCCTGGCTG‑CTGCCACACCGGG‑GGAAGATAAAATTAAAAATCCCCCCACCCGGACCTTCCAgcgggggggcg > 2:680439/1‑229 (MQ=255)
aCCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTTGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑GCGTGGGTG‑CTGCCACGCCGGG‑GGAAGAAAAGATTAAACAACCCGCGACCCCGACATCTCAGGCGGGgcga > 2:86359/1‑236 (MQ=255)
aCCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCCCCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCACCGCCGGG‑GAAAGAAAAACTTAAAAAACCCGCGAccccaacactcccgcggggggccat > 2:581887/1‑217 (MQ=255)
aCCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCAt > 1:442263/1‑239 (MQ=255)
aCCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑CCGTGGCTG‑CTGCAACGCCGGG‑GAAAGAAAAGTTTAAAAATCCCGCGACCCGTACCTTCCAGGCGGGgcgcct > 1:1198662/1‑237 (MQ=255)
cccGTGGGCAGGCCGCCGTTGAATGGCTAAAAACCGCAGAAGAAGCCGATAGCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCAtt < 1:224726/239‑1 (MQ=255)
gggggCAGTCAGCCGCTGAATGGCTAAAAACCGCAAAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTgg < 1:874064/237‑1 (MQ=255)
tGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGCGCGTAACCCCGAACAGCCGGTGACCCGCACCAAAGAACTGGCGGAGG‑GCGGGGCCGTCGGCAA‑GCCGGG‑GGAAGGAAAGCTTAAAAACCCACCGAACCCGACCTGCCAGCCGGGGCGCCATTggg > 2:331188/1‑239 (MQ=255)
tGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGa < 2:421461/189‑1 (MQ=255)
tGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGa > 1:421461/1‑189 (MQ=255)
cgTCAGCCGCCGAATGGCTAAAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTTTGGTGAAGGGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTaaa < 2:1107214/237‑1 (MQ=255)
tCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGGGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGGGCGCATTTgg > 1:58618/1‑231 (MQ=255)
ccGTTGAATGGCTACAAACCGGAGAAGAAGCCGATATCGCCTGGGTATTGAAACCCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGGCGGGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGaa < 2:1343692/239‑1 (MQ=255)
ccGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAACCCTATGGTGAAGAGCGTTCTGCCAAACGCATTGCCCGCGCCATTGTCGGGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGaa < 1:1116913/239‑1 (MQ=255)
ggcggAATGGCTAAAACCCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCAGTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGaa < 1:1345420/234‑1 (MQ=255)
cggtGAAGGGCTACAAACCGCAGAAGGAGCCGATATCGGCTGGGTATTGAAAACCTAGGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGaa < 1:456969/235‑1 (MQ=255)
gAATGGCTACAAGCCGGAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGGGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTgga < 1:625547/239‑1 (MQ=255)
gAATGGCTACAACCCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTgga < 1:331188/239‑1 (MQ=255)
gAAGGGCTACAAACCGCAGAAGAAGCCGATTACGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCAATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTgga < 1:289173/239‑1 (MQ=255)
aaaTGGCTAAAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTgga < 1:674455/238‑1 (MQ=255)
tGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGCAG‑TCGTGGCTG‑CTGCAAAGCCGGG‑GAAAGATAAGTTTAACACTCCCGCGACCCGTACCTTCCACGCGGTGCGCCTTTGGGGAAAAAGGGAA‑CTggcgga > 1:435708/1‑239 (MQ=255)
cTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGGGAA‑ATGGAGGAGAt > 1:213339/1‑239 (MQ=255)
aaCCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGGCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGc < 1:567268/239‑1 (MQ=255)
cGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAgg < 1:1205289/239‑1 (MQ=255)
cAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTCAACATCCCGCGACCCGTACCTTCCAGGCGGGGCGCCTTTGGGTAAAAAGTGAC‑ATGGCGGGGAGAaagcaagc > 1:714852/1‑238 (MQ=255)
cAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGGGCGCCTTTGGGTAAAAAGTGAA‑CTGGAGGAGTTAGAGCAGgc > 1:962880/1‑238 (MQ=255)
cAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGCACCTTCCAGGCGGGGCGCCTTTTGGTAAACAGGGAA‑CTGGAGGAGATAGAGGAGgc > 1:1275137/1‑238 (MQ=255)
tccgttttCGCCTTGGTATTGAAAACCTATGGGGAAAGGCGTTTTCCCAAACGGATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTGTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAg < 2:714852/232‑1 (MQ=255)
gCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAAAGCAGGCGCT‑aaaaa > 1:1165086/1‑238 (MQ=255)
gCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTCCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGAACCGTACCTTCCACGCGGGGCGCCTTTGGGGAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑caaaa > 1:540807/1‑238 (MQ=255)
cgggatatgtgtataagatacagcTATGGTGAAGAGTGTTTTGCCAAACGCATGGCCCGCGCTATTGCCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTCAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAgctc < 1:1265651/216‑1 (MQ=255)
tatCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGGAAACAGTGAA‑CTGGAGGAGATAGGCCAGGCGCT‑AAAAAggccc > 1:659943/1‑234 (MQ=255)
tatCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGGAAAAAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAgctcgc > 1:387267/1‑239 (MQ=255)
gCCTGGGTATTGAAAACCTGGGGGGAAGGGCGTTTGGCCAAACGGCTTGCCCGGGCCATTGTCGAGCGTGACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCaa < 2:811526/239‑1 (MQ=255)
gCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTgga < 1:890408/206‑1 (MQ=255)
ccTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGG‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCCGGCGGTGCGCATTTGGGTAAACAGGGAA‑CTGGAGGAGATAGGGCAGGGCCT‑AAAAAGCTCCCTCAAc > 1:183729/1‑239 (MQ=255)
gggTTTTGAAAACCTTTGGTGAAAGGCGTTTTGCCAAACCCCTTGCCCGCGCCATTGTCGAGCGGAACCGGGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCaa < 2:17628/235‑1 (MQ=255)
aaaaCCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGG‑GAAAGATAAAGTTTAACATCCCGCGACCCGTACCTTCCCGCCGGTGGGCATTTGGGTAAACAAGGAA‑CTGGAGGAGATAAAGAAGGGCCC‑AAAAAgcccgccccaacagcgggcccc > 2:1163879/1‑223 (MQ=255)
aaCCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCCTTTGGGTAAACAGTGAA‑CTGGAGGAGATAGGGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGcccccg > 1:17628/1‑237 (MQ=255)
aCCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAAAGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAAAGTGCTGGCCCCggg > 1:196986/1‑239 (MQ=255)
cTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTg > 1:330525/1‑239 (MQ=255)
ttGGTGAAGAGCTTTTTGCCAAACCCTTTGCCCGCGCCATTGCCGAGGTTAACCGCGAACAGCCGATGACCCGCAACAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTggg < 2:919223/238‑1 (MQ=255)
ttGGTAAAGAGCGTTTTGCCAAACGCATTGCCGGCGCCTTTGTGGAGCGGAACCGCGAACAGCCGATGCCCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CGGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTggg < 2:1008502/238‑1 (MQ=255)
aaGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCCCGACCCGTACCTTCCACGCGGTGCGCATTTGGGGGAAAACGGAA‑CCGGAGGAGATAGAGCAGGCGCG‑AAAAAACTCGCTCCAAGAGCAGGGCCCgggggggggggcg > 2:369545/1‑236 (MQ=255)
aaGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGG‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CCGGGGGAGATAGAGCAGGCGCT‑AAAAAAATCCCTCCACGTGCTGGCCCCgggggggggg > 2:70687/1‑236 (MQ=255)
gagCGTTTTGCCAAACGCTTTGCCCGCGCCATTGTCGAGCGTAACCGCGCACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑GCGAGGCTG‑CCGCAATGCCGGG‑GGAAGAAAAGTTTAAACATCACGCGACCCGTACCTTCCCCGGGTGGCGCACTTGGGGTACAAGTGAG‑CTGGAGGAGACAGAGCAGGGGCG‑TAAAACCATGCACCACGTGCTGGAGCCGGGGGGGGGGGTTTc > 2:928866/1‑239 (MQ=255)
gagCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGCTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGGGAA‑CTGGAGGAGATAGAGCAGGCGAT‑AAAAAGCTCGCTCAACGGTCTGGCCCCGGGCGGGCGGCTTTc > 1:455144/1‑239 (MQ=255)
tttGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGG‑GAAAGATAAGTTTAAACATCCCCGCACCCCTACCCTCCCGGCGGTGGCCCTTTGGGTAAACAAGGAA‑ATGGAGGAGAAAGAGCAGGGCGT‑AAAAAACTCGCCCCAAGGGCTGGCCCCGGGGGGGGGGGtttgcgtccc > 2:965252/1‑232 (MQ=255)
aaCGTATTGCCCGGTCCTTTGGCGTGCGTAACCGGTAACAGCCGATGACCCGCACCAAAGTACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTc < 1:86359/239‑1 (MQ=255)
cATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACt < 1:581887/239‑1 (MQ=255)
tttGCCCGGGCCATTGGAGAGCTAAACCGCGAACAGCGGATGCGCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGGGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACt < 2:1040513/237‑1 (MQ=255)
cgcgCCATTGTCGAGCGTAACCGGGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGa < 1:549977/239‑1 (MQ=255)
ccccccctttgcGAGCTTAACCGCCAACCGCCGAAGGCCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGa < 2:620292/228‑1 (MQ=255)
gcgcCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCCACGCCGGG‑GGAAAATAAGTTTAAACATCCCGCGACCCCGACCCTCCCGGCGGGTGGCAATTGGGTAACAACGGAACCGGGAGGAG‑TAGAGCAGGCGCTCAAAAGGCTCCCCCCA‑GTGCCGGCCCCGGGGGGGCGGCTTTCGaacaaacactacaacccgccggga > 2:1355635/1‑219 (MQ=255)
gtaattgatgggCGTAACCGCAAACAGGCGAGGCCCCGCACCAAAAAACTGGCGGAAG‑TCGTGGCTG‑CTGCAATGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACGGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGa < 1:550701/228‑1 (MQ=255)
gcCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGa < 1:1009497/239‑1 (MQ=255)
tGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑GCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAAAATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGGGAA‑CTGGAGGGGATAGAGCAGGGGCC‑AAAAAGGTCGCTCAACGTGGCGGCCCCGGGGGGGGGGCGTTCGGTCATCAGCCTTCAACCGCCGGAAAACCgga > 2:1375806/1‑237 (MQ=255)
aGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCCTACCTTCCAGGCGGTGCGCCTTTGGGTAAACAGGGAA‑CCGGAGGAGATAGGACCGGCGCT‑AAAAAACTCGCTCCACGGGCTTGCCCCCGGGGGGCGGCCTTCGTTTAACCCCTTCCCCTCGCCgggaagccggatgggg > 2:1197815/1‑225 (MQ=255)
cGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGGGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCCTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATt‑ggtaa > 1:420574/1‑235 (MQ=255)
ggaaCCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGaa < 1:1083475/236‑1 (MQ=255)
tAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAgg > 1:1131363/1‑152 (MQ=255)
ccGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGGGATAGAGCAGGCGCT‑AAAAAGCTCCTTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGGACATCCGCTTCCACTCGCTGGAAGACCGTATT‑GTGACACGtt > 1:609326/1‑239 (MQ=255)
ccGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGGGCGCATTTGGGTAAACAGTGGA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGGGGGGGGGTTTCGGTCATTACCTTCCACTCGCTGGAAGACCGTATT‑GTGAAAAGtt > 2:1342092/1‑239 (MQ=255)
aaCAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGAGCGCATTTGGGTAAACAGTGAG‑CTGGGCGGGATAGAGCAGGCCCT‑AAAAAGCTCGCTCAACGGGCTGGCCCCGGGTGGGCGGGTTTCCATCATCAGCTTCCCCCCCCCGGGAGACCgacttggggaagagtttagg > 2:1377072/1‑220 (MQ=255)
gCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGATCGCCCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCCTCAGCTTCCACTCGCTGGAAGACCGGATT‑GGGAAACGTTTTATGCGTGGAAAAAGCcgc > 1:510032/1‑239 (MQ=255)
gCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGCACCTTCCAGGCGGGGCGCATTTGGGTAAACAGTGAA‑CTGGCGGCGATAGAGCAGGCGCT‑AAAAAGCCCGCTCACCGTGCGGTCCCCGGGTGGGGGGGTTTTGACCATCAGCTTCCACCCCCTGGAAACCACGATT‑GTGAAACGCTTTTTTCTTGAAAACACCcgc > 2:1044709/1‑239 (MQ=255)
aaGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCg < 1:220150/239‑1 (MQ=255)
aaGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGCGAA‑CTGGAGGCGATAGAGCAGGCGCT‑AAAAAGCGCGCTCAACATGCTCGCCCCAGGGGGGGGGCTTTTGATCATCAGCTTTCACTCGCCGAGAGACCGTGTTGGGGAAAGGTTTTTTGGGGGaaaaaccccgggtcc > 2:890634/1‑227 (MQ=255)
aGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGc < 1:874450/239‑1 (MQ=255)
ccTGGGGGAAT‑GCGTGGATG‑TGGCAACGCCGGT‑GAAAGAAAAGTTTAAACACCCCGCGACCCGTTCCCTCCAGGCGGTGCTGATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCGCGCTAAACGTGCTGGCCCCGGGTGGGCGGTTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCa < 2:1246039/236‑1 (MQ=255)
gCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCAtt > 1:911059/1‑81 (MQ=255)
gCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCAtt < 2:911059/81‑1 (MQ=255)
ggAAG‑TCGTGGCTG‑CTGCAACCCCGGG‑GAAAGATAAGTTTAAACCTCCCGGGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCgg < 2:833813/239‑1 (MQ=255)
gaactggTGGCCG‑CTGCAACGCCGGG‑GAAAGAAAAGTGTAAACACCCCGCGACCCGTACCTGCCGGGGGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCgg < 2:196986/232‑1 (MQ=255)
aaG‑GCGTGGCCG‑CTGGAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGGGACCCGTACCTTCCAGGCGGTGCGAATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGc < 1:178108/238‑1 (MQ=255)
gagtgtgggCTG‑CCGCACGGCCGGG‑TAAAGAAAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGc < 2:1143078/231‑1 (MQ=255)
gaagtgtggggttgttgacggCCGGT‑GAAAGGTAAGTTTAACAACCCCCGGACCCGTACCTTCCAGGGGGTTCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGc < 2:962425/219‑1 (MQ=255)
aG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGGGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GGGAAACGTTTTATCCGTGAAAAAACCCCGGGTCCGCAAGTTCCGGCAg > 1:833813/1‑239 (MQ=255)
ctg‑ctgCCACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGCAGGGTTAcc < 1:1245511/238‑1 (MQ=255)
g‑ctgcAACGGCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGCAGGGTTACCGAt < 1:1278809/239‑1 (MQ=255)
g‑ctgcAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGCAGGGTTACCGAt < 1:70687/239‑1 (MQ=255)
aCGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGGGCTGGCCCCGGGGGGGCGGCTTTCGATCATCAGCTTCACCTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATTCGGGAAAACAGCACCGGTCCGCAAATTCCGGGAGGGttccactagacaaa > 2:415314/1‑227 (MQ=255)
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GGCTTTTCCTTTATGCGCGATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAG‑TCGTGGCTG‑CTGCAACGCCGGT‑GAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAA‑CTGGAGGAGATAGAGCAGGCGCT‑AAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATT‑GTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGCAGGGTTACCGATGACTGA > NC_000913/90436‑90902
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
