Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
525,571 |
T→G |
11.4% |
W771G (TGG→GGG) |
rhsD → |
Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 525,571 | 0 | T | G | 11.4%
| 261.9
/ 2.4
| 108 | W771G (TGG→GGG) | rhsD | Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor |
| Reads supporting (aligned to +/- strand): ref base T (58/34); new base G (9/7); total (67/41) |
| Fisher's exact test for biased strand distribution p-value = 5.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 110 total aligned reads displayed.
AGTGAGGATGAGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGAACTGACCAGCACAT > NC_000913/525334‑525802
|
agTGAGGATGAGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGCCGAATGCCAAACGGTGGGGAACCCGGAGACGG‑GGGAACTGCtgtg > 1:853580/1‑239 (MQ=255)
tGAGGATGAGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTCTGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGGGGGGAACCCGGAGAAGG‑GGGAACAGCTgggga > 2:809726/1‑238 (MQ=255)
gAGGATGAGGGGCTTGTCATCCTGTGGTACTACGATGAATCGGACCATATCGCTCGCCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTCTGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCATCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAAGGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTgg < 1:1089885/237‑1 (MQ=38)
tgtgggtctttgcctCCTCTGGTTGCACGATTAATCGGACCGTATCCCCCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTGGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCAt < 1:807425/224‑1 (MQ=37)
tGAGGGACTTGTCAGCCTCTGGTACTACGATGAATCGGACCGTATCCCTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCAt < 1:897362/238‑1 (MQ=255)
aGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGCCGATAAAGGCCGCCTGACCGGCGAATGCCGAACGGTGGAGAACCCGGAACCGG‑GGGACCTGCTGTggaactggc > 1:848295/1‑230 (MQ=255)
aGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGGGGGGAACCCGGAGACGG‑GGGAACTGCTGGGGCA‑GCATgag > 1:547711/1‑239 (MQ=255)
aGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGGGGAAAACCCGGAGACGG‑GGGAACCGCCGTGgca‑gcagagg > 2:428922/1‑235 (MQ=255)
aGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGACCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACGGCTGTGGCA‑GCATga > 1:572213/1‑238 (MQ=255)
ttGTCATCCTCTGGTACTACGGTGAATCGGACCGTATCCCTCACCGGACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑Gaaa < 1:56123/239‑1 (MQ=255)
ttGTCATCCTCCGGTACTACGATGAATCGGACCGTATCCCGCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑Gaaa < 1:1144185/239‑1 (MQ=255)
ttGCCATCCTTGGGGACCACGATGAATCGGACCGTATCGCTCACCGCACGGTGAAAGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑Gaaa < 1:589273/239‑1 (MQ=255)
gTCATCCGCTGGTACTACGATAAATCGGACCGTATCCCTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAaca < 1:872042/239‑1 (MQ=255)
ttGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACa < 1:428922/238‑1 (MQ=255)
acGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTCCGCGCAGGCAACCGGGTTGCCGGCCACTAAGGCTATGACGAAAAAGGCCGCCTACCCGGCCAAGGCCAGACGGTGGAGAACCCGGATACGG‑GGGAAATGCTGGGCCG‑GAATGGGC‑C‑Gaaaacacgacacaacagcaag > 2:1102688/1‑221 (MQ=255)
cGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCCCTCTGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCCGACGGCGGAAGACCCGGGGACGGTGGGAAC‑CCTGTGGCA‑GCA‑CAGAGC‑GAAACAAACCAACAACGAACAgg > 2:271831/1‑239 (MQ=255)
cGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGGACCCGGGGGCGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑A‑GCAAAAAGCAAACAAagagaggg > 2:1128024/1‑235 (MQ=37)
cGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATgaga > 1:259314/1‑215 (MQ=255)
cGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGGGGCA‑GCATGAGA‑C‑GAAACACCCCTACAACGAGCAgg > 1:996826/1‑239 (MQ=255)
gAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGCCGG‑GGGAACTGCTGGGGCA‑GCATGGGA‑C‑GAAAAACGCATACAACGAGCAggg > 1:1359736/1‑236 (MQ=255)
tATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGCCAGACATCAGCCACCTGCGCGAAGGCCACCGTGTTGCCGTCCACTTTGGCTATGACACTAAAGGCCGCCTGACCGGCGAAGGCCAGACGGCGGGGAACCCGGAGACGG‑GGGAACTGGCGTGGCG‑GCTACAGA‑CGGAAACA‑GCACACAACGAGCAGGGGCGGGACAAAcgcg > 2:142639/1‑239 (MQ=255)
tATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCGGGGGCA‑GCATGGGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACcgc > 1:505616/1‑238 (MQ=255)
tcactcacCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGAAGGGGCTGGCAAACCCCGt > 1:846146/1‑238 (MQ=255)
tagggacaggggTGAACGGCGAACCGGCAGAGCCGTGGACGGTTGATGGCCAC‑GGCTGGCTGACAGGCCTCAGCCACCTGAGCGAAGGCCCCCGTGGTGCCGGCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACg < 2:884464/229‑1 (MQ=21)
cGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACACCGAGCAGGGGCAGGCAAACCGCGTCCCGC‑CGGa > 1:882988/1‑239 (MQ=255)
cGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACCCATACAACGAGCAGGGGCTGGCAAACCGCGTCCCGC‑Cgg > 1:569066/1‑238 (MQ=255)
cGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGAA‑GCATGAGA‑C‑GGAACACGCCTACAACGAGCAGGGGCTGGGACAACGCGTCACGC‑Cgg > 1:842794/1‑238 (MQ=255)
cGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGCGGCGAACCCGGAGACGG‑GGGGACGGCTGGGGCA‑GCATGAGA‑C‑GAAACACCCATACAACAGGCAGGGGCGGGCAAAcacggcaccgccggg > 2:337659/1‑225 (MQ=37)
cACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGCTAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGGGGCA‑GCACGGGA‑C‑GAAAAACGCCTAAAAAGAGCAAGGACGGGGaaaacacggtaaggcgggaa > 2:593623/1‑222 (MQ=25)
cGGTAAACGGCGAACCGGCAGAGCAGGGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGc < 1:331786/239‑1 (MQ=255)
gTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGcc > 1:762841/1‑238 (MQ=255)
acgggaaaCCGGCAGGACGGGGGCAGTTTGAGGGGCCC‑GGCTGGCGGACAGACATCAGCCCGCTGAACGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGGCGATAAAGGCCGCCTGACCGGCGAATGCCGGACGGTGGAGAACCCGGGGACGG‑GGGAACGGCTGTGGCA‑GCATGAGA‑C‑GAAACCCGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTgcc < 2:569066/232‑1 (MQ=18)
cgggaaaCCGGAAG‑GCAGTGGGAGTTTGGGGGGCCCGGGCTGGGTGAAAGACCTCCGCCACCTGAGCGAAGGCCACCTTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCGGACCGGCGAATGCCGGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTgccgc < 2:1359736/234‑1 (MQ=18)
gAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGGGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATCCAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGcc > 1:884464/1‑229 (MQ=255)
cctgcaagacAGGGGCAGGATGATGGCCCG‑GGCGGGCTAACCGACATACGCCACCGGAGCGAAGGCCACCGTGTTCCCGTCCGCTAGGGCTAGGACGAAAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGTCTGGCAAACCGCGTCACGC‑CGGACAGCATGCCGCCGGTGGa < 2:882988/230‑1 (MQ=18)
ccGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGGGAAGGCCACCGTGGTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATAAAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGa < 1:142639/239‑1 (MQ=255)
ccGGAAGAGCAGGGGCAGTTTGATGGCCCC‑GGCTGGCTGACAGACATCAGCCCCCTGAGCGAAGGCCACCGTTTGGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGa < 1:1059282/239‑1 (MQ=255)
cggggcatgggCAGTGTGGTGCCCCG‑GGCTGGCGGCAAGACCTCACCCCCCTGAGCGAAGGCCACCGTGGTGCCGGCCACTATGGGTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCG‑GCATGAGA‑A‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTgg < 2:547711/230‑1 (MQ=17)
gCAGTGGCCGTATGAGGGCCCC‑GGCTGGCTGACAGACATCAGCCCCCTGGGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGc < 2:389003/236‑1 (MQ=255)
gTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGACCAGGGGCTGGCAAACCGCGTCACGC‑CGGCCAGCCTGCCGCCGGGGGGGTGGCTGACGt > 1:722442/1‑239 (MQ=255)
taagaggacgggccccgtgtggctgAAAGACATCAGCCCCCTGAGCGAGGGCCCCCGGGTTGCCGCCCACTATGGCTAGGACGATAAAGGCCGCCTGACCGGGTAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATg < 2:943229/220‑1 (MQ=18)
acgTATGGTGGCCGC‑GGGTGGCCGGACGACCACAGCCACTCGGGCGAAGGCACCCGTGTTGCCGCCCCCTATGGCTAAGACGAAAAAGGCCGCCCGACCGGCGAATGCCAGACGGTGGAGACCCCGGAGACGG‑GGGAACTGCTGGGGCA‑GCATGAGA‑C‑GAAACCCGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATgg < 2:783814/237‑1 (MQ=17)
tgatggtgGCCAC‑GGCTGGCTGACCGGCATCAGCCACCTGAGGGAAGGCCACCGTGTTGCCGTCCACTATGGCTAAGACGATAAGGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGc < 1:989174/236‑1 (MQ=255)
tATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCa < 1:638396/196‑1 (MQ=255)
ggCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCAt > 2:11801/1‑144 (MQ=255)
ggCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCAt < 1:11801/144‑1 (MQ=255)
aC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGGGCAGGGGCTGGCAAACCCGGTCACGC‑CGGACAg > 2:638396/1‑196 (MQ=255)
aC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GAATGAGA‑C‑GAAACACGCATACAACGAGCCGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGCGGAGTGGCTGACGTATGGCAGCGGTTTccca > 1:783814/1‑237 (MQ=255)
gggtggctgAAAGACCTCACCCACCTGAGCGAAGGCCACCGTGTTGCGGTCCACTATGGCTAGGCCGAGAAAGGCCGCCTGCCCGGCGAATGCCAGACGGTGGAAACCCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGc < 2:176473/236‑1 (MQ=18)
aggtggctgACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCCGGGGCTGGCAAACCGCGTCACGC‑CGGACAGcc > 1:156160/4‑196 (MQ=255)
gctgACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGaa > 1:491688/1‑239 (MQ=255)
gctgACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGGGGCTGCCGTATGGCAGCGGTTACCTGGCgggga > 1:373955/1‑237 (MQ=255)
gctgACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGACAGGCGGACGTATGGCAGCGGtga > 1:943229/1‑226 (MQ=255)
ctgACAGACATCAGCCACCTGGGCGAAGGCCACCGTGTTGCCGTCCACTAGGGCTAGGACGATAAGGGCCGCCTGACCGGGGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGaa < 1:337659/238‑1 (MQ=255)
aGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGGGGAGTGGCTGACGTATGGCAGCGGGTACCTGGCGGGAATGAAGCTGGGCGGGAggccccg > 1:181821/1‑236 (MQ=255)
gCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCCGCGGTTACCTGGCGGGAATGAAGATGGGCGGGGCGCCGCTGGTCGAg > 1:728716/1‑239 (MQ=255)
gCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTAc > 1:1140035/1‑200 (MQ=255)
gCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGACAACACCGGCACCC‑CGGCAAGCCTGCCGCCGGGGGGGGGGCTGACGGATGGCCACGGTTACCCCGCGGGAATGAAGCTCGGCGGGAagcgcaggggcgag > 2:929632/1‑228 (MQ=18)
gccgcggttgtgcGTCCCCTAGGGCGATGACGAGAAGGGCCCTCTAGCCGGGGAAGGCAAGGCGGGGGGAAGCCGGGAGGCGG‑GGGAACGGTTGTGGCA‑GCAGGAGG‑C‑GAAACCCGCATCCAGCGAGCAGGGGCTGGCAAGCCGCGTAACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGt < 2:106807/227‑1 (MQ=255)
cccccGTGTTCCCGCCCCCTATGGCTATGCCGAAAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGAGGG‑GGGAACTGCTGGGGCA‑GCATGGGA‑C‑GAAACCCGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGt < 2:1153275/236‑1 (MQ=18)
aCCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGGGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGACGCAAGCTGGGCGGGACGCCGCTGGTCGGGtat > 1:222111/1‑239 (MQ=255)
gttttGCCGCCCACTAGGGCTAGGGCGATAAAGGCCGCCTGGCGGGCGAATGCCAGAGGGTGGAGAACCCGGGGGCGG‑GGGAACGGCGGGGGCA‑GCATGGGA‑C‑GAAACACGCATACAACGGGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATAc < 2:1349623/235‑1 (MQ=18)
gCCGTCCCCTATGGCTATGCCGATAAGGGCCGGCGGACGGGCGAAGGCCAGACGGGGGAGACCCCGGAGACGG‑GGGAACGGCTGGGGCA‑GCAGGAGA‑C‑GAAACACGCAGACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGa < 2:942075/239‑1 (MQ=18)
ccGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGa > 1:106807/1‑238 (MQ=255)
tCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGc < 1:707566/165‑1 (MQ=255)
tCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGc > 2:707566/1‑165 (MQ=255)
tCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGCCGGATGGGAGGGGGTAACTGGGGGGAAGGAAGAGGGGGGGGACGCCGCCGGGCGGGGAAACGGGGGGCaag > 2:602146/1‑237 (MQ=17)
tCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGAGGCCGCTGGGCGAGGATACCGGGGa > 1:1153275/1‑235 (MQ=255)
tCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGGTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGGATACGCGGGACAg > 1:492795/1‑238 (MQ=255)
ccccttgtggttttgcgaaTAAAGGCCGCCTGACCGGCGAATGCCAGGCGGGGGAGAACCCGGAGACGG‑GGGAACCGCGGGGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAgg < 2:619073/221‑1 (MQ=18)
cccgaggggtagggagaaaaaGGCCGCCTGCCCGGTGAATGGCGGGGGGTGGGAAACCGGGAGAGGG‑GGGAACGGCTGTGGCA‑GCATGAGA‑C‑GAAACAGGCATAAAAGGAGCAGGGGCGGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTCCCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCt < 2:722442/221‑1 (MQ=255)
cACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGGCAgg > 1:1349623/1‑237 (MQ=255)
cACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCATGGCGGGACGCCGCTGGCCGGGGATACGCGGGACAGGcc > 1:1169175/1‑238 (MQ=255)
cACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGCCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACCCGGGACAGGc > 1:752230/1‑238 (MQ=255)
aTGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGGGTATACGCGGGGCAGGCTGCACCGTggg > 1:458072/1‑237 (MQ=255)
aTGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCGGCCCCgggga > 1:588727/1‑235 (MQ=255)
tGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTTGGGCA‑GCAGGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTgaga < 1:1128024/239‑1 (MQ=255)
tGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGa > 1:142766/1‑147 (MQ=255)
tGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTgag > 1:825051/1‑238 (MQ=255)
aCGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCCGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGGATACGCGGGACAGGATGCACCGGGAGACg > 1:1100401/1‑239 (MQ=255)
aCGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGGGGAGTGGCTGACGTATGGCAGCGGTTACCCTGCGGGGACTAAGCTGGGGGGGCAGCCGCTGGGCCGGTATACGCGGGGCAGGcgtgaccggggggcg > 2:784163/1‑225 (MQ=17)
tAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTTGCTGACGTATGGCAGCTGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTTTACGCCGGGCAGGCTGACCCGGTAGACCGTg > 1:284978/1‑238 (MQ=18)
tAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGATGATACCCGGGACAGGCTGCACCGTGGGACGGTgc > 1:766891/1‑239 (MQ=255)
aaaaGGCCGGCGGGCCGGGCAAGCCCAGGAGGTGGAGAACCCGGGAGGGG‑GGGAACTGGTGGGGGAGGTAGGAGA‑C‑‑AAACCAGCAAAAAACGGGGAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTgc < 2:829556/238‑1 (MQ=17)
gccgccTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGGATACGCGGGACAGGCTGCACCGTGGGACGGTGCGCa > 1:879233/1‑237 (MQ=255)
ccTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGGGCGCAGCTTCg > 1:440625/1‑239 (MQ=255)
gggCGAATGCCAGACGGTGGAGAACCCGGGGCCGG‑GGGACCTGCTGTGGCA‑GCATGAGA‑C‑GAAACCCGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGgcagc < 1:644868/237‑1 (MQ=255)
aaTGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGGATACGCGGGACAGGCTGACCCGTGAGACGGTGCGCAGCTTCGGCAGCATggca > 1:193435/1‑239 (MQ=255)
gCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGGGAGACGGTGCGCAGCTTCGGCAGCATggcggg > 1:53011/1‑238 (MQ=255)
tGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGGAATGc > 1:486680/1‑238 (MQ=255)
tGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGGGGGACGGGGCGCAGCTTCGGCAGCAGGGCAGGCAGTAATGcc > 1:632446/1‑239 (MQ=255)
cccGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCAAACg > 1:443833/1‑239 (MQ=255)
cGGGGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGaa < 1:952343/239‑1 (MQ=255)
ggAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCAGTCGGGGATGAAGCTGGGCGGGCGCCCCCTGGTCGCGGATACCCGGGAACGGCCGCAACGGGAGACGGTGCCCAGCTTCGGACGAATGGCAGGCGGGAATACCCCAAACCaaa > 2:655096/1‑238 (MQ=17)
ggAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGGATGGCAGCGGTTACCTGGCGGGGATGAAGGTGGGCGGGACGCCGCTGGTCGAGGATAAGCCGGACCGGCTTACCCGGGAGAAGGGGCGCGGCTTCGGCACCCTggcaggcgggcataccgccaccgaac > 2:1027602/1‑220 (MQ=17)
gg‑gggACCTGGTGTGGCG‑GGATGAGC‑C‑AAAACCCGCTTTCAACGAGCGGGGGTGGGCAACCCGCGGCCCGC‑CGGACCGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGAGGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGAACTGACCa < 2:632446/239‑1 (MQ=18)
gg‑gggAACGTGTGTGGCA‑GCATGGGC‑G‑GAAACCCCCCAACAAGGGGGGGGGGCGGGCAACCGGGGTC‑CGCGCGGCAAGCCGGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGAACTGAcc < 2:954229/238‑1 (MQ=17)
gggAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTg > 1:408078/1‑173 (MQ=255)
gggAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTg < 2:408078/173‑1 (MQ=255)
aCTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGCCGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGAATACACGGGGCGGGCTGCACCCGGGGAGCGGGCGCACCTTCGGCACCATGGGAGGCCGTAAAGCCCCAAACGAACAGACCcacacaa > 2:462959/1‑238 (MQ=18)
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AGTGAGGATGAGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCAC‑GGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGG‑GGGAACTGCTGTGGCA‑GCATGAGA‑C‑GAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGC‑CGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGAACTGACCAGCACAT > NC_000913/525334‑525802
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
