Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
540,600 |
A→T |
10.1% |
L12F (TTA→TTT) |
ybbY → |
putative uracil/xanthine transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 540,600 | 0 | A | T | 10.1%
| 345.0
/ 2.3
| 124 | L12F (TTA→TTT) | ybbY | putative uracil/xanthine transporter |
| Reads supporting (aligned to +/- strand): ref base A (33/76); new base T (11/4); total (44/80) |
| Fisher's exact test for biased strand distribution p-value = 2.59e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01 |
Only 100 of 124 total aligned reads displayed.
ATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCT > NC_000913/540363‑540824
|
aaccccACAAAGTCAGCCCGTATGTTGGCCTTTCCATTGGCGCGCGTATCCCGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCTCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTAt < 1:1009880/235‑1 (MQ=255)
ccACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTTT‑CC‑CGTTTAGGGGTGTTTATGTTCAATTTTTCGGGCAGCCGCGGAAACCCGTTTTCC‑gg > 1:372403/1‑239 (MQ=255)
ccACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGGGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCTATTTC‑CC‑GGTAAAGG‑GGGGTTATGTTCTATTTTGACGTCGGCCGGGAGAAACTGTTAttcga > 1:429436/1‑235 (MQ=255)
aGTCACCCCTTTTTTTGGCCGTACCCTTGGCGCGCGTATCACGAAAACCATCTTACGTGGGGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCa < 2:478623/239‑1 (MQ=255)
gggcGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTACAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑tt < 1:1041511/236‑1 (MQ=255)
ggCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CTTCT‑CC‑CGTTAAGGTGGGTTTATGTTCAATTTTTCAGTCAGCCCCGGAAACCCGTTATAA‑GGCTTTTAGT‑G‑GTGTTTCtttt‑tt > 1:729088/1‑239 (MQ=255)
gTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTTTGTTCAATTTTTCAGTCAGCCGCGCAAACCCGGTATCA‑GGATTTTTGG‑T‑GGTTTTCtttt‑tttttt > 1:997606/1‑239 (MQ=255)
tccctttgggcggcgTATCACGAAATCCCTCTTACGTGGTGAGGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTg < 2:75173/227‑1 (MQ=255)
tccATTGGGGCACGTATCACGAAAATCAACTTACGTGGTGATTGGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTg < 1:518518/237‑1 (MQ=255)
tttgcgcgcGTATTCCGAAAACCCTTTTGCGTGGTTGTGTGGATTACGACATTGAACAGGGGTTCCCTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAACCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAaca < 2:394844/236‑1 (MQ=255)
ttGGTGCGGGTTTCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAaca < 2:40282/239‑1 (MQ=255)
tgggcggcgTTTCACGAAAACCATCTTACGTGGTGATGTGATTTACGCCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAacac < 2:862854/233‑1 (MQ=255)
tGGCGCCGGTTTCAAGAAAACCATTTTACGGGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAacac < 2:729088/239‑1 (MQ=255)
cgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGGTCAGGGGTGTTTATGTTCCATTTTGCCGTCAGCCGCGAAAGCCTGTTATCG‑AGGTTTTTGT‑G‑GTTTTTCTTTA‑TTTTTTGCCACAAGGttt > 1:679891/1‑238 (MQ=255)
cgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AATCT‑CC‑CGGTAAGGGGGGGTTATGGTCAAATTTTCAGTCAGCCCCGAAAGCCTGTTTTTA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAAAACGGGtg > 1:950964/1‑239 (MQ=255)
cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGG‑ATTCT‑CC‑GGTTAGAGGGGGTTTATGTTTAATTTTGCAGTCACCCCCGCAAGCCTTTTTTTC‑GGGTTTCTGTGG‑GTTTTTTTTTT‑TTTTTTTCAACAGGGtgtg > 2:406543/1‑236 (MQ=255)
cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTTAGGGGGGTTTATGTTCCATTTTTCCGTCAGCCGCGCAAGACCGTTATCA‑GGGTTTTAGT‑G‑GTTTTTCTTTT‑TTTTTTTCTACACCGGtgtg > 1:65955/1‑239 (MQ=255)
aTCCCGAAAACCCTCTTGCGGGGGGATGTTATTTTCGGCATTTAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGtt < 2:1272716/239‑1 (MQ=255)
cccGAACACCATCTTTCGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTTTTGCGCGGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTtcc < 2:674317/237‑1 (MQ=255)
cccATTTTTCCTGGTGATGTGATTTACGACATTGAACGGGGCTTCCCTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 2:657563/238‑1 (MQ=255)
aCCATTTTACGTGGTGATGTGATTTACGGCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:220315/239‑1 (MQ=255)
aCCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:962702/239‑1 (MQ=255)
aTCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGCAAGACTGTTTTCC‑GGGTTTCCTT‑G‑GTTTTTCTTTA‑TTTTTTGTAAAACGGTTGTGGTTCCTCCCACGcc > 1:1261000/1‑237 (MQ=255)
ttACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAGACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGTGTTTATGTTCAATTTTTCAGGCAGCCGCGAAAGCCTGTTATTT‑GGATTTCAGG‑G‑GGTTTTCTTTT‑TTTTTTTCAACAAGGTTTTGTGTCCTCCTACGGCACtt > 2:531921/1‑239 (MQ=255)
tcctgggtgggttgttttACGACTTTGAACGGGGCTTCCCTGTTGCGCCCAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACttt < 2:1252467/224‑1 (MQ=255)
cGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGTGTTTATGTTCAATTTTGCAGGCAGCCCCGAAAGCCTGTTATCA‑GGGTTTTAAT‑G‑GGTTTTTTTTT‑TTTTTTTCAAAACGGTTTTGGTTCCTCCTCCGCTACttttt > 1:474000/1‑237 (MQ=255)
gtgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGGTAAGGGGTGTTTTTGTTCAATTTTGCAGTCAGCCCCGAAAGCCCGTTATCA‑GGATTTACGT‑G‑GGTTTTCTTTA‑TTTTTTTCAACACGGGTTTGGGTCCTCCTCCCCGACTTTCTGCtt > 1:1080003/1‑239 (MQ=255)
tgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGGTAAGGGGTGTTTATGTTCAATTTTGCAGTTCGCCCCGCAAGCCTGTTATCA‑GGATTTTAGT‑G‑GTTTTTCTTTA‑TTTTTTTCCACACGGTTGTGGTTCCTCCCACGCTACTTTTTGCttt > 1:1267629/1‑239 (MQ=255)
tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑CGTTAAGGTGGGTTTTTGTTCAATTTTTCAGTCAGCCCCGAAAGCCCTTTATCA‑GGGTTTTCGT‑G‑GGTTTTCTTTT‑TTTTTTTCAACACGGTTTGTGTTCCTCCTTACCTTCTTTCTTTTTTTCAGTTTcc > 1:414693/1‑238 (MQ=255)
ccgactttaaCCGGGCTTCCCTTTTGCGCCGAAAGGTCCATTTATCCTTAAACATCAGCAGTAATCGGGCCCCGGCAATGCCCGGCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa < 2:1317139/231‑1 (MQ=255)
cGACATTGAACAGGGCTTCCGTGTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa < 1:292796/239‑1 (MQ=255)
cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGG‑CATCT‑TC‑GGTTTAGGTGTGTTTATATTTTATTTTTGAATCAGCCCGGGAAGACCGGTATTC‑GGGTATGCGG‑G‑GTTTTTTTTTATTTTTTTGCAA‑ACGGGTGTTGTTTCTCCCACGCCCCTTTCTGGTTTTCAATTTGCGCa > 2:1257318/1‑239 (MQ=255)
cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGt < 1:1364628/203‑1 (MQ=255)
cATTGAACAGGGCTTCCATGTTTCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa < 1:1005280/236‑1 (MQ=255)
gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGc < 1:406543/239‑1 (MQ=255)
gAACAGGGCTTCCCGGTTGGGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTTCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGc < 1:527335/239‑1 (MQ=255)
ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCTCCC‑GGTTAAGG‑GTGGTTATTTTCCATTTTTCCGTCAGCCGCGAAAACCTGTTATCAGGGATTTC‑GT‑G‑GGTTTTTTTTT‑TTTTTTTCACACCGGTTGTGGTTTCCCCTACCCTCCTTTTTTCtttttcgtttgcccaaaagaccctgct > 2:583211/1‑215 (MQ=255)
ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTTAGGGGGGTTTTTGTTCTATTTTGTAGTCAGCCGCGAAAAACCGTTATAC‑GGGATTCTGTGG‑GTTTTTTTTTT‑TTTTTTTCAA‑ACGGTTGTGGTTCCCCCTTCACGCCTTTCTGTTTTTTATTTGCCCGAAAgaaacgctccc > 2:1005280/1‑229 (MQ=255)
tcTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCt < 1:538914/236‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CTTTT‑CC‑GGGTTAGGGGGGTGTATTTTTCATTTTGCAGTCAGCCGCCGAAGCCTGGTTTCA‑GGATTTTATG‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGGTGGTGTGTCTCCCACGCTCCTTTCTTCTTTTCAGTTTCCGCCAAAGAGCCCCCTTACGc > 2:1197987/1‑238 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CTTCT‑CC‑TGTTAAGGTGTGTTTATGTTCAATTTTGCCGTCAGCCGCGGAACCCTGTTATAA‑GGGTTTCTTG‑G‑GTTTTTTTTTT‑TTTTTTTCAACACGGTTGTGGGTCTCCCTCCGCTACTTTTTTCTTTTTTGTTTTCGCACAGGAGcactcttaccc > 2:495442/1‑228 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGGGGTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTTGTATCA‑GGATTTCCGT‑G‑GGTTTTCTTTT‑TTTTTTTCAACACGGTTTGGGTTCTCCCTAGCACACTTATTTCTTTTTAGTTTCCGCAAAGTAGcgcgtttaacc > 2:679232/1‑228 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑CGTTAAGGTGTGTTTTTGTTCCATTTTGCCGTCAGCCGCGAAAGCCCGTTTTTC‑GGATTTTAGT‑G‑GTTTTTTTTTT‑TTTTTTGCTACACGGTTTTGGGTCCTCCCCCCCCACTTTTTGCTTTTTTGTTGCCCCCAAGACGCCCGCtttccc > 2:842352/1‑234 (MQ=255)
ccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATTCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:305822/239‑1 (MQ=255)
ccTGTGGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:388235/239‑1 (MQ=255)
cTGTTGCGCCCAAAGTCTAATGTTTTCTTGAACATCAGCAGTAGTCTGGACCCTGAAATCCCCGTCGCTCCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTACGTGGAATTTTGCAGTCAGGCGCGAAAGCCTGGTATCA‑GGATTTCCGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTCGCCGCAAAGTAGCCTGCTTACGCTCa < 2:1052035/239‑1 (MQ=255)
ttGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CTTCT‑CC‑GGTTCAGGTGTGTTTTTGTTCAATTTTGCAGGCCGCCGCGCAAGCCCGTTTTCA‑GGTGTTCAGT‑G‑GTTTTTCTTTT‑TTTTTTTCAACCCGGTTGTTGTTCCTCCTCACCTCCCTTTTTCTTTTTAGTTGCCCCCAAAGAGTCTCCTTACGCCCACGc > 2:1374872/1‑239 (MQ=255)
tGCGCCGAAGGGTCAATTTATCCTTAAACATCATCAGTAATCGGGCCCCTGCAATGCCCGTCCTTGCGGCGGTC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCGCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCa < 1:63240/239‑1 (MQ=255)
gcgcCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAAGGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCaa < 1:209131/239‑1 (MQ=255)
tCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCtttt < 1:842352/237‑1 (MQ=255)
taaTTTATCCTTAAACTTCAGCAGTAATCTGGCCCCTGCAATGCCCGTGCTTGCGGCGGGC‑ATTCG‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 1:836241/237‑1 (MQ=255)
cAATTTATCCTTAAACCTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 1:160095/238‑1 (MQ=255)
cTTAAACCTCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑TTTCT‑CC‑GGTTAAGGTGTGTTTATTTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:779106/239‑1 (MQ=255)
cTTAAACAGTAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:203772/239‑1 (MQ=255)
tCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGTGTTTATGTTCAATTTTTCAGTCAGCCGCGAAAGCCTGTTATCA‑GGGTTTCAGG‑G‑GTTTTTCTTTA‑TTTTTTTCAACACGGTTGTGGGTCCTCCTACCCTACTTTCTTCTTTTTTTTTGCCCCCAAGTAGCCTGCTTACGCTCACCCAAAATGTTTTTTTTTCTACCGCACCGGCCt > 2:1098944/1‑238 (MQ=255)
cgcggTAATTTGGCCCCTTCAATTCCCGTCCTTGCGGGGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTTCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTGTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCt < 2:679891/235‑1 (MQ=255)
attattcgggCCCCTGCAATTCCCGTCTTTCGGGCGGGC‑ATTTC‑CC‑GGTTAAGGTGGGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCt < 2:1267629/228‑1 (MQ=255)
agTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCtt < 1:1214556/237‑1 (MQ=255)
tAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCC‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTGCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAata < 1:732519/205‑1 (MQ=255)
aaTTTGGCCCCTGCATTGCCCGTCCTTGCGGCGGGC‑CTTCC‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCg < 2:128078/236‑1 (MQ=255)
agttGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:677710/219‑1 (MQ=255)
tCTGGCCCCGGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAg < 1:317415/239‑1 (MQ=255)
gCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTTAGGTGTGTTTTTGTTCAATTTTTCAGTCAGCCGCGAAAACCTGTTATCA‑GGATTTTAGT‑G‑GGTTTTTTTTT‑TTTTTTGCCACAAGGTTTTGGTTCCTCCTACGCTCCTTTCTTCTTTTCAGTTGCCGCAAAGTAGCCCGCTTACGCTCACCCAATATGCTTTTCTTTCTACCGCACTGGCCTGCTTCGCCTAGGCGt > 1:1354322/1‑239 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTTTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTTCCGCAAAGGAGCCTGCTTACGCTCACGCAATATGCTTTTTTTGCTACCGCACCGGCCTGCTTCGCTCAGGCGgttttc > 1:826301/1‑237 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTTCATTTTTCAGTCAGCCGCGAAAGCCTGTTATCA‑GGGTTTCAGT‑G‑GGTTTTCTTTA‑TTTTTTGCAACACGGGTGTGGTTCCTCCTACGCTCCTTTCTGCTTTTTTGTTTCCGCCAAGAAGCCTGCTTACGCTCACCCCATATGCTTTTTTTTCTACCGCACTGGCCTGCTTctttctcttaaaaaa > 2:677710/1‑224 (MQ=255)
tGCCCGTCCTTGCGGCGGGC‑ATTCT‑CCGGGTTAAGG‑GGGGTTATGTTTCATTTTGCAGTCAGCCGCGAAAGCCTGGTATCA‑GGGGTTCAGT‑G‑GTTTTTTTTTA‑TTTTTTTCCACACGGGTTTGGGTCCTCCTACGCTACTTTCTTCTTTTTAGTTGCCCCACAGTAGCCCGCTTACTCTCCCCCACTAAGCTTTTCTTGTTCCCCCACCGGCCCGCTTCGCTCCGGCGgttttctggc > 2:213432/1‑232 (MQ=255)
gTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGTGGTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCCCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgt > 1:350094/1‑238 (MQ=255)
ttcTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg < 1:531921/237‑1 (MQ=255)
tCCCTGCGGCGGGC‑ATTCT‑CG‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCATCACGGTTGTGGTTCCTCCTACGCTACGTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg < 1:150251/239‑1 (MQ=255)
ccTTGGGGGGGGG‑CTTCT‑CC‑GGTTAAGGGTTTTTTATGTTCAATTTTGCAGGCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 2:997606/239‑1 (MQ=255)
ccTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTTTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 1:422194/239‑1 (MQ=255)
ccTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCCGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 1:640780/239‑1 (MQ=255)
cttggcgcggGC‑ATTCT‑CC‑GGTTAAGGTGTTTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:1004925/233‑1 (MQ=255)
cTTGCGGCGGGC‑CTTGT‑CC‑GGTTTAGGTGTGTTTATGTTCAATTGTGCAGTCAGCCGCGAAAGCCTGGTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:407384/239‑1 (MQ=255)
cTTGCGGCGGGC‑ATTTT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:213432/239‑1 (MQ=255)
tttgggttggtcttct‑tc‑GGTTAAGGTGTGTTTTTGTTCAATTTTGCATGCATCCGTGAAACCCTGTTATCG‑GGCTTTCAGT‑G‑GGTTTTCTTTA‑TTTTTGGCAACCCGGTTGGGGTTCCTCCTACGCTACTTTCTTCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCgcgc < 2:73907/227‑1 (MQ=255)
tttggggtgggtttttccc‑GGTTAAGGTTTTTTTTTTTTCAATTTTGCAGTCAGCCGGGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACGCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:162642/222‑1 (MQ=255)
c‑ATTCC‑CC‑GGTTAAGGTGTTTTTATTTTCAATTTTGCAGGCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGa < 1:679232/238‑1 (MQ=255)
tt‑cC‑GGTTAATGTTTTTTTTTTTTCAATTTTGCAGTCCGCCCCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTTCTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGc < 2:474000/238‑1 (MQ=255)
gTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCTTCCCGCTATTATGGAAGGGCCAggg > 2:1207146/1‑238 (MQ=255)
ttAAGGTGTTTTTATTTTCAATTTTGCCGTCGGCCGGGAAAGCCTGTTATCA‑GTATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTGCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGGTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTg < 2:417525/239‑1 (MQ=255)
aaGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGc < 1:1257318/239‑1 (MQ=255)
tgtttTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg < 1:1052581/238‑1 (MQ=255)
gttttttATGTTCAATTTTGCAGTCAACCCCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACTGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg < 1:264224/234‑1 (MQ=255)
tgtTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTgtgg > 2:94667/1‑239 (MQ=255)
tttATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACg > 2:791385/1‑138 (MQ=255)
tttATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACg < 1:791385/138‑1 (MQ=255)
aTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAATGGCCAGGTGGCCTGTGGTgggg > 1:755244/1‑239 (MQ=255)
gTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTTTGGGGGGGa > 1:599032/1‑238 (MQ=255)
tttaaTTTTGGAGTCAGCCGGGAAAGCCTGTTTGTA‑GGATTTCAGT‑G‑GTTTTTTTTTA‑GTTTTGGAAACCCGGTGGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCGTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAc < 2:372403/236‑1 (MQ=255)
ttCAATTTTGCATTCATCCGCGAAATCCTGTTTGTA‑GGATTTC‑GT‑GTGTTTTTCTTTT‑TTTTTGGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGAAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAc < 2:1080003/239‑1 (MQ=255)
cAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGa > 1:878304/1‑210 (MQ=255)
cAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAcc > 1:1008957/1‑238 (MQ=255)
aTTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCCCAGGCGTTTTGCGGTCATCTTCGCGCTCTTATGGAAGGGCCAGGTGGCCTGGGGGGGGGAACCaa > 2:183793/1‑237 (MQ=255)
cAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGt < 2:101709/99‑1 (MQ=255)
cAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGt > 1:101709/1‑99 (MQ=255)
gtcgcaAAAGCCTTTTTTCA‑GGTGTGTCGT‑G‑TTTTTTCTTTA‑GTTTTGGTCACACGGGTGGGGTTCCCCCCACGATGCTTTCTGGTTTGCAGGTGCCGGTAAGTGGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACGGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCAcc < 2:356882/237‑1 (MQ=255)
ggcgAAAGCCTTTTATCA‑GGATTTTGGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACCCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGGAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCt < 2:65955/238‑1 (MQ=255)
cgcgAAAGCCTGTTATCA‑GGATTTCAGT‑T‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCt < 1:1098944/239‑1 (MQ=255)
cgcgAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTGCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCAcc < 1:701133/237‑1 (MQ=255)
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ATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCT > NC_000913/540363‑540824
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
