Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F17 I0 R1
|
160 |
98.0 |
2214160 |
89.0% |
1970602 |
222.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
540,610 |
C→T |
12.5% |
Q16* (CAG→TAG) |
ybbY → |
putative uracil/xanthine transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 540,610 | 0 | C | T | 12.5%
| 267.6
/ 4.4
| 103 | Q16* (CAG→TAG) | ybbY | putative uracil/xanthine transporter |
| Reads supporting (aligned to +/- strand): ref base C (24/64); new base T (10/4); total (34/69) |
| Fisher's exact test for biased strand distribution p-value = 2.06e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 103 total aligned reads displayed.
CCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGAC > NC_000913/540380‑540845
|
ccGTATGTTGGGCGTACCATTGGCGCGCGT‑ATCACGAAACCCATCTTACGTGGTGATGTGATTTACGACAATGAACTGGGCTTTCCTGTTGCGCCGAAAGGTCAATTTACCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGt‑t < 1:817454/238‑1 (MQ=255)
aTGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCt < 1:139145/239‑1 (MQ=255)
ggCCTTCCCATTGGGCCACGT‑CTCACCAAGACCTTCTTCTGTGGTGATCGTATTTACGCGATTGAACAGGGGTTCCCTGGTGATGCGAAAGGTCTATTTATTCTTAACAATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATGCTTCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTAtt < 2:737959/239‑1 (MQ=255)
ggCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCCGTTAAGGTGTGTTTTTGTTCCATTTTTCAGTCAGCCCCGAAAGCCTGTTTTCAGGGTTTTA‑GTGGG‑TTTTTTTTAtt > 1:925389/1‑239 (MQ=255)
ggCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCCCCGGTTAAGGAGGGTTTTTGTTCCATTTTTGAGTCAGCCGCGAAAGCCTGTTTCCCGGCTTTCATGGGGT‑tttttttttt > 1:550430/1‑237 (MQ=255)
tACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGTTAAGGGGTGTTTATGTTCAATTTTTCCGTCAACCGCGCAAGCCTGGTTTCAGGGTTTCA‑GTTGt‑ttttttttttttttt > 1:92191/1‑238 (MQ=255)
tctaTTGGCGCGCATAATCA‑GAAAACCATTTTACGGGGTTATGTAATTTACAGCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTg < 2:829496/235‑1 (MQ=255)
aCCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCAATCTCCGGTTAAGGGGGGGTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGG‑TTTTTTTTAtttttttg > 1:289817/1‑237 (MQ=255)
ttGGCGCGGTT‑ATCACGAAACCCATCTTACGTGGGGATGTGATTTACGCCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAa‑ca < 2:668220/239‑1 (MQ=255)
ttGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGGTAAGGGGGGGTTTTGTTCAATTTTTCAGTCAGCCGCGGAAGCCTGTTATCAGGGTTTTT‑GTGGT‑TTTTTTTTTTTTTTTGCaca > 1:835425/1‑236 (MQ=255)
cgT‑TTCACGAAAACCATCTTACGTGGTTATTTGATTTACGACATTGAACAGGGCTTCCCTTTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTtgt < 1:151998/238‑1 (MQ=255)
cccgaaaacccttttcctggggtatgtgatTTACGAACTTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTtcc < 2:212757/216‑1 (MQ=255)
acactttttcctggggATGTGTATTAGGACATTGACCCGGGCGTTCCTGTTGCGCCGAAAGGTCAATTTTACCTTAAACAGCAGCAGTAATCGGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACg < 2:1024130/228‑1 (MQ=255)
aCCCTCTTACGTGGTGATGTTATTTACGACATTGAACAGGGCTCCCCTTTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACg < 2:320389/239‑1 (MQ=255)
aCCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACg < 1:1010747/239‑1 (MQ=255)
ccATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGGTTAGGTGTGGTTATTGTCAATTTTGCAGTCAGCCGCGGAAGCCCGTTATCAGGGTTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGGTGTGGTTTCTCCT‑Ac > 1:856656/1‑237 (MQ=255)
cATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCTCCGGTTAAGGGGTGTTTATTTTTAATTTTTCCGTCAGCCCGCAAAGACCGTTTTCTGGGTTTTT‑GGGGG‑TTTTTTTTTTTTTTTTTAA‑CACGGTTTTGGtgtttcccccac > 2:31954/1‑227 (MQ=255)
cTTTCGTGGTGATTGGATTTACGACATTGAACAGGGTTTCCCTGTTGGGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACt < 2:1090712/239‑1 (MQ=255)
cTTACGTGGTGATGTGATTTACGGAATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACt < 1:278562/239‑1 (MQ=255)
ggtgATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGCGTTAGGGGTGGTTTTGTTTAATTTTTCAGTCAGACGCCAAAGCCTGTTATTCGGTGTTCA‑GGGGT‑TTTTTTTTTTTTTTTTCAACCACGTTTGTGGtgctccccatcccctttttttt > 2:559185/1‑218 (MQ=255)
atgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGGGTGTTTATGTTCAATTTTGCAGTCAGCCCCGAACGCCTGTTTTTCGGATTTCC‑TGGGG‑TTTTCTTTATTTTTTTGAA‑CACGGTTTTGGTTCTCCCT‑ACCCTACTTTTTTCttttt > 1:395322/1‑238 (MQ=255)
tgtttttccacttttaaCCGGGCTTTCCTTTTGCTCCGAAATGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGTAATGCCCGTTCTTGCGGCGGGCATGTCACGGTTAAGTTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGt < 2:547755/224‑1 (MQ=255)
tgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGTTAAGGTGTGTTTATGTTCCATTTTGCAGTCAGCCTCGAAAGCCTGTTATCAGGATTTCA‑GAGGG‑TTTTCTTTATTTTTTTTAA‑CACGGTTGTGGTGCCTCCT‑ATGCTACTTTTTGCtttttcgt > 1:553844/1‑235 (MQ=255)
tgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATCTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGGGTGTTTTTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTTTCAGGATTTCA‑GTGGG‑TTTTTTTTATTTTTTTCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTTCTTTTC‑AGt > 1:846560/1‑239 (MQ=255)
tgaattactgcaatgacaaGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCGGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGt < 1:137622/221‑1 (MQ=255)
tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGTTAAGGGGGGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCACGTTATCAGGATTTTA‑GTGGG‑TTTTCTTTTTTTTTTTCAA‑CACGGGTTTGGGTCCTCCT‑ACGCTACCTTTTGCTTTTT‑AGTTTcc > 1:874860/1‑238 (MQ=255)
tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCCGTTAAGTGGTGTTTATGTTCAATTTTGCAGTCAGCCCCCCAAGCCAGTTTTTGTGGTTTTT‑ATGTG‑TTTTTTTTTTTTTTTTTAA‑CCCGGTTGGTGTTTCTCCT‑ACCCCACtttttttttttttttttcc > 2:50286/1‑222 (MQ=255)
cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTCAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTATCCGTGTTCGGGGGGTTTTTGATTTAATTTGTGTGCAGCCGCGAGCAGCTGTTATCATGGTTTCA‑GTGGG‑TTTTTTTTTTTTTTTGCAA‑CCCAGGTGTTGGTCCTTCC‑ACGCGACCTTTTGTttttttcttgacccc > 2:137622/1‑228 (MQ=255)
cATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGGGTGTTTATGTTCAATTTTGCAGTCAGCCCCGCAAGCCTGGTATCAGGATTTTA‑GTGGT‑TTTTTTTTATTTTTTTCAA‑CACGGGTGTGGGTCCTCCT‑ACCCTTCTTTTTTCTTTTT‑ATTTGCCGCCAAg > 1:1004785/1‑239 (MQ=255)
ttGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCATCTCCGGTTAAGGGGTGTTTTTGTTTAATTTTTCAGTCAGCCCCGGCAGCCCGTTATCAGGGTTTCA‑GTGGT‑TTTTTTTTATTTTTTTCAA‑ACCGGTTGTGGGTCTCCCA‑ACCCTCCtttttctttttttattggtccaaaca > 2:396082/1‑215 (MQ=255)
tGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAg < 1:3391/239‑1 (MQ=255)
tGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGCCATTCTCCCGTTAAGGGGGGTTTTTGTTCAATTTTTCAGTCCGCCCCGCAAACCTGGTTTTAGGGTTTTC‑GTGGT‑TTTTCTTTTTTTTTTTCAA‑CACGGTTTGGGTTCTTCCC‑ACGCTACTTTCTTCttttttttttccgccaagaa > 2:7850/1‑222 (MQ=255)
gAACGGGGCTTCCTTGTTGCGCCGAAAGTTCATTTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGc < 2:925389/239‑1 (MQ=255)
gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGc < 1:470345/239‑1 (MQ=255)
gAACAGGGCTTCCCTGTTGCGCAGAAAGGTCAATTTATCCTTAAACAGCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGc < 1:554182/239‑1 (MQ=255)
aaCAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGc < 1:605772/238‑1 (MQ=255)
ttCCCTTTTGGGCCGAAAGGTCAATTTTTCCTTAAACATCAGCAGTAATCTGGCCCCTGAAATTCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACg < 2:92191/239‑1 (MQ=255)
ttCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACg < 1:85676/239‑1 (MQ=255)
tCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACg < 1:697797/238‑1 (MQ=255)
tccTTTTGCGCAGAAAGGTTCATTTATTCTTAAACATGAGCAGTGAGCTGGCCCCTGAAATGCCTGTCCGGGCGGCGGGAATTGTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCGGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCt < 2:775178/238‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACCTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCt < 1:559185/239‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCaaa < 1:615158/223‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGGTAAGGTGTGTTTATGTTCAATTTTTCAAGCAGCCGCGAAAGCCTGTTATCAGGATTTTC‑ATGGT‑TTTTTTTTATTTTTTGCCA‑CACGGTTTTTGTTCCTCCT‑ACGCCTCTTTCTTTTTTTC‑TTTTTCCGCCAAGAAACCTTCTTaacc > 2:1045171/1‑235 (MQ=255)
ccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:7850/239‑1 (MQ=255)
ttgccgccaaagtgaaaTTTTTCCTTAAACCTTCGCAGGTATCTGGCCCTCGTAATGCACCGCCTTTCGGGGGGCATTCTCCGGGTAAGGTGTTTTTATGTTCAATTTTGACGTCAGCCGCGAAAGCCTGTGATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTGCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGc < 2:579550/224‑1 (MQ=255)
tGCGCCGAAAGGTCAATTTATCCTTAAACGTCAGCCGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCa < 1:688991/239‑1 (MQ=255)
ccGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCGTTCTCCGGGTAAGGTGTGTTTATTTTCAATTTTGCAGTCCGCCACGAAAGCCTGTTTTCGGGTGTTCA‑GTGGG‑TTTTTTTTTTTTTTTGTAA‑ACCGGTTTTGGTTCCTCCTCCCGCT‑CTTTTTGCTTTTC‑TCTTTGCCCAAAATAACGTCCTTACCCTCAcagaaaaa > 2:411910/1‑232 (MQ=255)
gTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACttt < 1:289285/185‑1 (MQ=255)
cAATTTTTCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 2:1092961/238‑1 (MQ=255)
aattttACCCTTAAACATCCGCAGTAATCTGGCCCCTGCAATGCCCGTCCCTGCGGCGGGCACTTTCCGTTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTCCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 2:885374/235‑1 (MQ=255)
ttttCCTTAAACACCAGCAGTAATCTGGCCCCTTCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑Ta < 2:725586/236‑1 (MQ=255)
cTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCa < 1:464915/239‑1 (MQ=255)
ccccTGCAATGCCCGTCCTTGCGGCGGGGATTTTCCGGTTAAGGGGTGTTTATTTTCCATTTTGCCGTCAGCCCCCAAAACCTGTTATTAGGGTTTTC‑GTGGT‑TTTTTTTTTTTTTTTTACA‑CACAGTTTTGGGTCCTCCT‑ACCCTCCTTTCTTCTTTTT‑TGTTTCCGCCAAGAAGCCTCCTTTCGCTCCCCCAAAATGTTTTTTTTTCTTACCGC‑CCGGCCGGCtttcccccagaggt > 2:1069002/1‑227 (MQ=255)
tGCCCGTCCTTGCGGCGGGCATTCTCCGGGTAAGGTGTGTTTTTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTTTTTATTTTTTGCAA‑CACGGTTGTGGGTCCTCCT‑ACGGCAATTTCTTCTTTTCTATTTTCCG‑AAAGTAGCCTCCTTACGCCCCCGCCATATGTTTTTTTTTC‑TCCCCCACTGGCCCGCTTCCCACACGCGTTTTGTGGGCa > 2:1037270/1‑239 (MQ=255)
tttttGGGGGGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCATTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg < 2:846560/236‑1 (MQ=255)
ccTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 1:100399/239‑1 (MQ=255)
tttGGGGCGGGACTTCTCCGTTTATGGTGTGTTTATGTTCAATTTTTGAGGCAGCCGCTAAGGCCTGTTATCGGGATTTCA‑GGGTT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGGGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:553844/238‑1 (MQ=255)
tctgcgtggggacttCTCCGGTTAAGGTTTGTTGTTGCTCAATGTTGCAGTCGGCCGCGAAAGCCTGTTATCAGGATTTCA‑GGGGT‑TTTTCTTTATTTTTTGCAA‑CCCGGTTTGGGTTCCTCCT‑ACGCTCCTTTCTGCTTGTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCGGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:430533/226‑1 (MQ=255)
ctggcggcgGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTAGTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:958184/236‑1 (MQ=255)
cTTGCGGCGGGGCTTTTCCGGGTAAGGTTTTTTTTTTTTTAATTTTGCATTCAGCCGCGAAAGCCTTTTATCAGGTTTTAA‑GTGGT‑TTTTTTTTATTTTTTTCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:1004785/239‑1 (MQ=255)
cTTGCGGCGGGCATTCTCCGGTTAAGGTGTTTTTTTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:835425/239‑1 (MQ=255)
cTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTTCTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:1094925/239‑1 (MQ=255)
cTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:917377/239‑1 (MQ=255)
cTTGCGGCGGGCATTCCCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCTCGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:1045171/239‑1 (MQ=255)
cTTGCGGCGGGCATTCCCCGGTTAAGGTGTGTTTATGGTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGTTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:765296/239‑1 (MQ=255)
cGGTTAAGGTTTGTTTATGTTCAATTTTGCAGTCAGCCTCGAAAGCCTGTTATCCGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGATACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAg < 1:879776/239‑1 (MQ=255)
ggTTTAGTTGTTTTTTTGTTGTATTTTGCAGTCTGCCCTGAAAGCCTGTTATCCGGATTTCA‑GGGGT‑TTTTCTTTATTTTTTGCAA‑CGCGGTTGTGGTTCCTCCT‑TCGCTACGTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGGAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAgg < 2:328801/239‑1 (MQ=255)
tAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTg < 1:1098297/238‑1 (MQ=255)
tttttttttTGTTCAATTTTGCTGTCCGCCGGGAAAGCCTTTTATAAGGGTTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CCCGGTTGGGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg < 2:289817/234‑1 (MQ=255)
gtgtgtTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCCCCTGCCTGCTTCCCTCAGGCGTTTTTCGGTCAGCGTCCCGCTATTTTGGAAGGGACAGGTGGCCtg > 2:608098/1‑239 (MQ=255)
tttgtTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATGTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg < 1:3072/236‑1 (MQ=255)
tgtgtTTATGTTCAATTTGGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg < 1:291846/238‑1 (MQ=255)
gtgtTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACTCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCTTCCCGCTATTATGGAAGGGCCCGGGGGCCtgtg > 2:545619/1‑239 (MQ=255)
tgtTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACCTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg > 1:248796/1‑210 (MQ=255)
tgtTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACCTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:248796/210‑1 (MQ=255)
tttATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCTCGCTATTATGGCAGGGCCAGGCGGCCTgtgggg > 2:3072/1‑237 (MQ=255)
tttATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTgtggtg < 1:733795/239‑1 (MQ=255)
gTTCAATTTTGCAGGCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CCCGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGaa < 1:812816/239‑1 (MQ=255)
ttCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCCCTGGCCTGCTTCGCTCCGGCGTTTTGCGGTCATCTTCCCGCTATTATGGAAGGGCCAGGGGGCCTGGGGGGGGGGAc > 2:850248/1‑239 (MQ=255)
ttCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGTGGGCCTTTGGTGGGGaa > 1:895671/1‑238 (MQ=255)
tCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CGCGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAcc < 1:31954/239‑1 (MQ=255)
cAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCa > 2:889849/1‑160 (MQ=255)
cAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCa < 1:889849/160‑1 (MQ=255)
aTTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGGTTTGCGGCCTTCTTCGCGCTATTCTGGAAGGGCACGTTGGCCTGGGGGGGGGAACCATc > 2:617110/1‑239 (MQ=255)
ttttCAGTTGGCCGGGAAAGCCTGTT‑TTAGGGTTTTT‑GTTGTGTTTTTTTTTTTTTTTGCCA‑CCCGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCt < 2:395322/239‑1 (MQ=255)
ttttCAGTCAGCCGCGAAAGCCTTTTTTCATGATTTCA‑GTTGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTCTTTTCTGCTTTTC‑AGTTGCCGCAAAGTCGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCTCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCt < 2:550430/239‑1 (MQ=255)
tttGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCt < 1:1047570/239‑1 (MQ=255)
tccgCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTAt < 1:477531/235‑1 (MQ=255)
aGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGTGGGCCTGTGGTGGGGACCCATCCTTACTATCa > 1:715811/1‑238 (MQ=255)
aGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCa > 1:409719/1‑238 (MQ=255)
gCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCAcc < 1:850248/239‑1 (MQ=255)
cTGTTATCAGGATTTTA‑GTGGT‑TTTTCTTTAATTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCAcc < 1:622517/228‑1 (MQ=255)
ttttttccggATTTTA‑GTGGT‑TTTTTGTTATTTTTTGCAA‑CTCGGTTGTGTTTCCTCCT‑CGCCTTATGTCTGCTTTTC‑AGTTTCCGCAAAGTAGCCTGCTTACGCTCACGCAAGCTGCTTTTCTTGC‑TTCCGCCCTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCa < 2:688768/231‑1 (MQ=255)
tCAGGATTTTC‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATcgcg < 1:1037270/239‑1 (MQ=255)
tCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATcgcg < 1:50286/239‑1 (MQ=255)
aGGATTTCA‑GTTGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATcgcgcg < 1:411910/239‑1 (MQ=255)
ggATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCt < 1:477375/141‑1 (MQ=255)
ggATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCt > 2:477375/1‑141 (MQ=255)
gATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTACGGTCATCGTCGCGCTATTTTGGAAGGGCCCGGGGGCCTTTGGGGGGGAAACATCCCTCCATTCCCCCTTGGGGaaacccgtctcttt > 2:622517/1‑227 (MQ=255)
tttCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGac < 1:78/239‑1 (MQ=255)
|
CCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGT‑TTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGAC > NC_000913/540380‑540845
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
