Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
540,632 |
G→T |
13.3% |
C23F (TGC→TTC) |
ybbY → |
putative uracil/xanthine transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 540,632 | 0 | G | T | 13.3%
| 375.5
/ 11.1
| 132 | C23F (TGC→TTC) | ybbY | putative uracil/xanthine transporter |
| Reads supporting (aligned to +/- strand): ref base G (32/81); new base T (17/2); total (49/83) |
| Fisher's exact test for biased strand distribution p-value = 5.61e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 135 total aligned reads displayed.
TACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGACACCGATCAACGATATCGCCACCA > NC_000913/540394‑540868
|
ttccgttgggcggcgTATTCCAAAAACCATCTTACGTGGTTATTTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTg < 2:1350423/227‑1 (MQ=255)
tccATTGGGGCACGTATCACGAAAATCAACTTACGTGGTGATTGGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTg < 1:518518/237‑1 (MQ=255)
tttgcgcgcGTATTCCGAAAACCCTTTTGCGTGGTTGTGTGGATTACGACATTGAACAGGGGTTCCCTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAACCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAaca < 2:394844/236‑1 (MQ=255)
ttGGTGCGGGTTTCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAaca < 2:40282/239‑1 (MQ=255)
tGGCGCCGGTTTCAAGAAAACCATTTTACGGGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAacac < 2:729088/239‑1 (MQ=255)
cgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGGTCAGGGGTGTTTATG‑TTCCATTTTGCCGTCAGCCGCGAAA‑GCCTGTTATCG‑AGGTTTTTGT‑G‑GTTTTTCTTTA‑TTTTTTGCCACAAGGttt > 1:679891/1‑238 (MQ=255)
cgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCAATCT‑CC‑CGGTAAGGGGGGGTTATG‑GTCAAATTTTCAGTCAGCCCCGAAA‑GCCTGTTTTTA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAAAACGGGtg > 1:950964/1‑239 (MQ=255)
cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGATTCT‑CC‑GGTTAGAGGGGGTTTATG‑TTTAATTTTGCAGTCACCCCCGCAA‑GCCTTTTTTTC‑GGGTTTCTGTGG‑GTTTTTTTTTT‑TTTTTTTCAACAGGGtgtg > 2:406543/1‑236 (MQ=255)
cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTTC‑CC‑GGGTAAGGGGGGGTTTTGTTTCATTTTTGC‑GTCAGCCCCGAAACGCCTTTTTTCG‑GGTTTTAGGG‑G‑GTTTTTTTTTT‑TTTTTTGAAAAAGGGTtgg > 2:1156894/1‑238 (MQ=255)
cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTTAGGGGGGTTTATG‑TTCCATTTTTCCGTCAGCCGCGCAA‑GACCGTTATCA‑GGGTTTTAGT‑G‑GTTTTTCTTTT‑TTTTTTTCTACACCGGtgtg > 1:65955/1‑239 (MQ=255)
aTCCCGAAAACCCTCTTGCGGGGGGATGTTATTTTCGGCATTTAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGtt < 2:1272716/239‑1 (MQ=255)
cccATTTTTCCTGGTGATGTGATTTACGACATTGAACGGGGCTTCCCTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 2:657563/238‑1 (MQ=255)
aCCATTTTACGTGGTGATGTGATTTACGGCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:220315/239‑1 (MQ=255)
aCCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:962702/239‑1 (MQ=255)
aCCATCTTACGTGGGGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:1029272/239‑1 (MQ=255)
aTCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGCAA‑GACTGTTTTCC‑GGGTTTCCTT‑G‑GTTTTTCTTTA‑TTTTTTGTAAAACGGTTGTGGTTCCTCCCACGcc > 1:1261000/1‑237 (MQ=255)
ttACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAGACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGGGTGTTTATG‑TTCAATTTTTCAGGCAGCCGCGAAA‑GCCTGTTATTT‑GGATTTCAGG‑G‑GGTTTTCTTTT‑TTTTTTTCAACAAGGTTTTGTGTCCTCCTACGGCACtt > 2:531921/1‑239 (MQ=255)
tcctgggtgggttgttttACGACTTTGAACGGGGCTTCCCTGTTGCGCCCAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACttt < 2:1252467/224‑1 (MQ=255)
ggtgATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCT‑CC‑GGTTTAGGTGTGGTTTTG‑TTCAATTTTTCCGTCAGCCGCGAAA‑GCCTGTTTTCT‑GGGTTTCAGT‑G‑GGTTTTTTTTT‑TTTTTTTCAACCCGGTTTTGTTTTCCCCCCCGCCACTTTCTgtt > 2:701133/1‑237 (MQ=255)
gtgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGGTAAGGGGTGTTTTTG‑TTCAATTTTGCAGTCAGCCCCGAAA‑GCCCGTTATCA‑GGATTTACGT‑G‑GGTTTTCTTTA‑TTTTTTTCAACACGGGTTTGGGTCCTCCTCCCCGACTTTCTGCtt > 1:1080003/1‑239 (MQ=255)
atgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTtcctc < 1:934171/218‑1 (MQ=255)
tgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCT‑CC‑GGTTTAGGGGTGGTTATT‑TTTAATTTTGCAGTCAGCCGCGAAA‑GCCTGGTATCA‑GGATTTCAGT‑G‑GTTTTTTTTTA‑TTTTTTTCAACACCGGTGTGGTTCCTCCTACCCTACTTttttcttttcc > 1:32387/1‑238 (MQ=255)
tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑CGTTAAGGTGGGTTTTTG‑TTCAATTTTTCAGTCAGCCCCGAAA‑GCCCTTTATCA‑GGGTTTTCGT‑G‑GGTTTTCTTTT‑TTTTTTTCAACACGGTTTGTGTTCCTCCTTACCTTCTTTCTTTTTTTCAGTTTcc > 1:414693/1‑238 (MQ=255)
ccgactttaaCCGGGCTTCCCTTTTGCGCCGAAAGGTCCATTTATCCTTAAACATCAGCAGTAATCGGGCCCCGGCAATGCCCGGCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa < 2:1317139/231‑1 (MQ=255)
cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGCATCT‑TC‑GGTTTAGGTGTGTTTATA‑TTTTATTTTTGAATCAGCCCGGGAA‑GACCGGTATTC‑GGGTATGCGG‑G‑GTTTTTTTTTATTTTTTTGCAA‑ACGGGTGTTGTTTCTCCCACGCCCCTTTCTGGTTTTCAATTTGCGCa > 2:1257318/1‑239 (MQ=255)
cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGt < 1:1364628/203‑1 (MQ=255)
cATTGAACAGGGCTTCCATGTTTCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa < 1:1005280/236‑1 (MQ=255)
gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGc < 1:406543/239‑1 (MQ=255)
ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCC‑GGTTAAGG‑GTGGTTATT‑TTCCATTTTTCCGTCAGCCGCGAAA‑ACCTGTTATCAGGGATTTC‑GT‑G‑GGTTTTTTTTT‑TTTTTTTCACACCGGTTGTGGTTTCCCCTACCCTCCTTTTTTCtttttcgtttgcccaaaagaccctgct > 2:583211/1‑215 (MQ=255)
ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTTAGGGGGGTTTTTG‑TTCTATTTTGTAGTCAGCCGCGAAA‑AACCGTTATAC‑GGGATTCTGTGG‑GTTTTTTTTTT‑TTTTTTTCAA‑ACGGTTGTGGTTCCCCCTTCACGCCTTTCTGTTTTTTATTTGCCCGAAAgaaacgctccc > 2:1005280/1‑229 (MQ=255)
ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGGGTGTTTATG‑TTCAATTTTGCAGTCAGCCCCGCAA‑GACCGTTATCA‑GGGTTTCTGG‑G‑GGTTTTTTTTT‑TTTTTTTCAAACCGGTTTTGGTTTCCCCCTCCCTACTTTTTGTTTTTTTTTTTCCGCaaaaaaagccgcgt > 2:662200/1‑228 (MQ=255)
tcTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCt < 1:538914/236‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCT‑CC‑TGTTAAGGTGTGTTTATG‑TTCAATTTTGCCGTCAGCCGCGGAA‑CCCTGTTATAA‑GGGTTTCTTG‑G‑GTTTTTTTTTT‑TTTTTTTCAACACGGTTGTGGGTCTCCCTCCGCTACTTTTTTCTTTTTTGTTTTCGCACAGGAGcactcttaccc > 2:495442/1‑228 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGGGGGGTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTTGTATCA‑GGATTTCCGT‑G‑GGTTTTCTTTT‑TTTTTTTCAACACGGTTTGGGTTCTCCCTAGCACACTTATTTCTTTTTAGTTTCCGCAAAGTAGcgcgtttaacc > 2:679232/1‑228 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑CGTTAAGGTGTGTTTTTG‑TTCCATTTTGCCGTCAGCCGCGAAA‑GCCCGTTTTTC‑GGATTTTAGT‑G‑GTTTTTTTTTT‑TTTTTTGCTACACGGTTTTGGGTCCTCCCCCCCCACTTTTTGCTTTTTTGTTGCCCCCAAGACGCCCGCtttccc > 2:842352/1‑234 (MQ=255)
ccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATTCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:305822/239‑1 (MQ=255)
ccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:661808/239‑1 (MQ=255)
ccTGTGGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:388235/239‑1 (MQ=255)
cTGTTGCGCCCAAAGTCTAATGTTTTCTTGAACATCAGCAGTAGTCTGGACCCTGAAATCCCCGTCGCTCCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTACG‑TGGAATTTTGCAGTCAGGCGCGAAA‑GCCTGGTATCA‑GGATTTCCGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTCGCCGCAAAGTAGCCTGCTTACGCTCa < 2:1052035/239‑1 (MQ=255)
tGCGCCGAAGGGTCAATTTATCCTTAAACATCATCAGTAATCGGGCCCCTGCAATGCCCGTCCTTGCGGCGGTCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCGCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCa < 1:63240/239‑1 (MQ=255)
gcgcCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAAGGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCaa < 1:209131/239‑1 (MQ=255)
taaTTTATCCTTAAACTTCAGCAGTAATCTGGCCCCTGCAATGCCCGTGCTTGCGGCGGGCATTCG‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 1:836241/237‑1 (MQ=255)
cAATTTATCCTTAAACCTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 1:160095/238‑1 (MQ=255)
cTTAACCCTCAGGAGTAATCTGGCCCCTGGAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCATTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:1346637/239‑1 (MQ=255)
cTTAAACCTCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCTTTCT‑CC‑GGTTAAGGTGTGTTTATT‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:779106/239‑1 (MQ=255)
cTTAAACAGTAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:203772/239‑1 (MQ=255)
cgcggTAATTTGGCCCCTTCAATTCCCGTCCTTGCGGGGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTTCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTGTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCt < 2:679891/235‑1 (MQ=255)
attattcgggCCCCTGCAATTCCCGTCTTTCGGGCGGGCATTTC‑CC‑GGTTAAGGTGGGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCt < 2:1267629/228‑1 (MQ=255)
agTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCtt < 1:1214556/237‑1 (MQ=255)
tAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCC‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTGCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAata < 1:732519/205‑1 (MQ=255)
aaTTTGGCCCCTGCATTGCCCGTCCTTGCGGCGGGCCTTCC‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCg < 2:128078/236‑1 (MQ=255)
agttGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:677710/219‑1 (MQ=255)
tCTGGCCCCGGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAg < 1:317415/239‑1 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTTTG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTTCCGCAAAGGAGCCTGCTTACGCTCACGCAATATGCTTTTTTTGCTACCGCACCGGCCTGCTTCGCTCAGGCGgttttc > 1:826301/1‑237 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTTCATTTTTCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGGTTTCAGT‑G‑GGTTTTCTTTA‑TTTTTTGCAACACGGGTGTGGTTCCTCCTACGCTCCTTTCTGCTTTTTTGTTTCCGCCAAGAAGCCTGCTTACGCTCACCCCATATGCTTTTTTTTCTACCGCACTGGCCTGCTTctttctcttaaaaaa > 2:677710/1‑224 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:241919/140‑1 (MQ=255)
aaTGCCCGTCCTTGCGGTGGGCATTCT‑CC‑GGGTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGt < 1:413516/239‑1 (MQ=255)
tGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTTAAGG‑GGGGTTATG‑TTTCATTTTGCAGTCAGCCGCGAAA‑GCCTGGTATCA‑GGGGTTCAGT‑G‑GTTTTTTTTTA‑TTTTTTTCCACACGGGTTTGGGTCCTCCTACGCTACTTTCTTCTTTTTAGTTGCCCCACAGTAGCCCGCTTACTCTCCCCCACTAAGCTTTTCTTGTTCCCCCACCGGCCCGCTTCGCTCCGGCGgttttctggc > 2:213432/1‑232 (MQ=255)
ttcTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg < 1:531921/237‑1 (MQ=255)
tCCCTGCGGCGGGCATTCT‑CG‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCATCACGGTTGTGGTTCCTCCTACGCTACGTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg < 1:150251/239‑1 (MQ=255)
ccTTGGGGGGGGGCTTCT‑CC‑GGTTAAGGGTTTTTTATG‑TTCAATTTTGCAGGCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 2:997606/239‑1 (MQ=255)
ccTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTTTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 1:422194/239‑1 (MQ=255)
cttggcgcggGCATTCT‑CC‑GGTTAAGGTGTTTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:1004925/233‑1 (MQ=255)
cTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:583211/239‑1 (MQ=255)
tttgggttggtcttct‑tc‑GGTTAAGGTGTGTTTTTG‑TTCAATTTTGCATGCATCCGTGAAA‑CCCTGTTATCG‑GGCTTTCAGT‑G‑GGTTTTCTTTA‑TTTTTGGCAACCCGGTTGGGGTTCCTCCTACGCTACTTTCTTCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCgcgc < 2:73907/227‑1 (MQ=255)
tttggggtgggtttttccc‑GGTTAAGGTTTTTTTTTT‑TTCAATTTTGCAGTCAGCCGGGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACGCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:162642/222‑1 (MQ=255)
tt‑cC‑GGTTAATGTTTTTTTTTT‑TTCAATTTTGCAGTCCGCCCCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTTCTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGc < 2:474000/238‑1 (MQ=255)
gTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCTTCCCGCTATTATGGAAGGGCCAggg > 2:1207146/1‑238 (MQ=255)
gggtgttgtTTTTT‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCTGGTTATCA‑GGGTTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTGGTGGTTCCTCCTCCGCTCCTGTCTTCTTTTCAGTTGGCGAAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGc < 2:823784/233‑1 (MQ=255)
aaGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGc < 1:1257318/239‑1 (MQ=255)
tttgtTTATT‑TTAAATTTTGCATTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑T‑GTTTTTCTTTA‑TGTTTTGCAACCCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg < 2:414693/236‑1 (MQ=255)
tgtttTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg < 1:1052581/238‑1 (MQ=255)
gttttttATG‑TTCAATTTTGCAGTCAACCCCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACTGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg < 1:264224/234‑1 (MQ=255)
tgtTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTgtgg > 2:94667/1‑239 (MQ=255)
tttATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACg < 1:791385/138‑1 (MQ=255)
tttATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACg > 2:791385/1‑138 (MQ=255)
aTG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAATGGCCAGGTGGCCTGTGGTgggg > 1:755244/1‑239 (MQ=255)
g‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTTTGGGGGGGa > 1:599032/1‑238 (MQ=255)
tttaaTTTTGGAGTCAGCCGGGAAA‑GCCTGTTTGTA‑GGATTTCAGT‑G‑GTTTTTTTTTA‑GTTTTGGAAACCCGGTGGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCGTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAc < 2:372403/236‑1 (MQ=255)
ttCAATTTTGCATTCATCCGCGAAA‑TCCTGTTTGTA‑GGATTTC‑GT‑GTGTTTTTCTTTT‑TTTTTGGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGAAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAc < 2:1080003/239‑1 (MQ=255)
ttCAATTTTGCAGTGAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAc < 1:495442/239‑1 (MQ=255)
cAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGa > 1:878304/1‑210 (MQ=255)
cAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAcc > 1:1008957/1‑238 (MQ=255)
aTTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCCCAGGCGTTTTGCGGTCATCTTCGCGCTCTTATGGAAGGGCCAGGTGGCCTGGGGGGGGGAACCaa > 2:183793/1‑237 (MQ=255)
gttccccccgAAA‑GCCTTTTTTTA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACCCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTAt < 2:1008957/231‑1 (MQ=255)
gtcgcgAAA‑GGCTGTTATTA‑GGATTTCCGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACCCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCAcc < 1:115383/237‑1 (MQ=255)
ggcgAAA‑GCCTTTTATCA‑GGATTTTGGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACCCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGGAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCt < 2:65955/238‑1 (MQ=255)
cgcgAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTGCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCAcc < 1:701133/237‑1 (MQ=255)
a‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAacac > 2:491875/1‑36 (MQ=255)
a‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAacac < 1:491875/36‑1 (MQ=255)
a‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTTTCACCCTTGGTGAAGCAtaccccg > 1:1288056/1‑233 (MQ=255)
aTTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:684720/164‑1 (MQ=255)
ttCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCGAAGTAGCCTGCt < 1:1148414/88‑1 (MQ=255)
ttCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCGAAGTAGCCTGCt > 2:1148414/1‑88 (MQ=255)
ttCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCt > 1:1308808/1‑88 (MQ=255)
tcatttgTTTTTTTTTA‑TTTTTTGCAACACGGTTGGTGTTCCTCCTCCGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTGGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGacac < 2:1354322/233‑1 (MQ=255)
aGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAg < 1:404879/177‑1 (MQ=255)
gTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGACACCGATCa > 1:1101518/1‑239 (MQ=255)
tttt‑ttttttTCAACTCTTTTGTTGTTCTTTCTACGATACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGTTCACGCAATAGGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGACACCGATCAACGatat < 2:592119/239‑1 (MQ=255)
a‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACttt < 2:119152/40‑1 (MQ=255)
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TACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CC‑GGTTAAGGTGTGTTTATG‑TTCAATTTTGCAGTCAGCCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGACACCGATCAACGATATCGCCACCA > NC_000913/540394‑540868
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
