Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 740,177 A→G 10.2% E224G (GAG→GGG)  phr → deoxyribodipyrimidine photolyase, FAD‑binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913740,1770AG10.2% 381.0 / 4.2 156E224G (GAG→GGG) phrdeoxyribodipyrimidine photolyase, FAD‑binding
Reads supporting (aligned to +/- strand):  ref base A (75/61);  new base G (7/11);  total (83/73)
Fisher's exact test for biased strand distribution p-value = 2.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01

Only 100 of 156 total aligned reads displayed.

CGAGATGTACAAAGTCTTTACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGG  >  NC_000913/739941‑740413
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                             
ggagaTGTAAAAAGGCTTTTCGCCTTTTAAGAATGCCTGGCTGAAACGGCTGGGGGAAGGGATGCCGGAGTGCGGCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGc                                                                                                                                                                                                                                             <  2:10644/238‑1 (MQ=255)
    aTGTACAAAGTCTTTACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTCCCGG‑GGAATATGAGcaaca                                                                                                                                                                                                                                         >  1:1041069/1‑239 (MQ=255)
              tCTTTACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGAGTTCGCAATGACGCCAGGTTTGCCTAGCCGGTGCCGG‑GGAAGATCAGGAAAAACAAAAttt                                                                                                                                                                                                                                >  2:875624/1‑238 (MQ=255)
                 ttACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAATCGGCGATTGCGCAATGACGCCATTTTTGCCAGAACGGGGCCGG‑CGATAATGGGCAAAAACGAGAGTTTcca                                                                                                                                                                                                                            >  1:936540/1‑238 (MQ=255)
                 ttACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCTGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑GGAAAATGAGCAACAACGGGATTTTCCg                                                                                                                                                                                                                            >  1:620239/1‑239 (MQ=255)
                 ttACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGGCTTTCGATAATGCGCATTTTCCGGTGGAAGAAAAAGTGGCGATTGCGCAATTACGCCAGTTTTGCCAAAACGGGGCCGG‑AGAAAATGAGCAAAAACAGAATTTTCCg                                                                                                                                                                                                                            >  2:962014/1‑239 (MQ=255)
                  taccacTTTTAAGAATGCTTGGCTGAACCGGGTGCGGGAAGGGATGGCGGAATGCGTAACTGCGGAAAAAGTTCGTAGTATCAGATCGATAGAGCCCCTGCCATCAATTACGCTGAAGTATCCTTGTCAGTCTTTCGATACGGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAGTGGTGCCGG‑AGAATATGAGCACCAACGAGATTTTCCgg                                                                                                                                                                                                                           <  2:936540/234‑1 (MQ=255)
                  tACCCCTTTGAAGAAGGCCTGGCTGAAACGGCTGGGGGAAGGGTTGCCGGGGTGCGTCTCTGCGCCAAAAGTTCGTAGTAGCGGTACGATAGGTCCCTAGCCAACCATTACGCTGAATTAACCTCGTCAGTCGTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCgg                                                                                                                                                                                                                           <  2:244066/239‑1 (MQ=255)
                    gttttgtataatggccaggtcTGAAACGGCGGCGGGAAGGGAGGTCGGGTGGCGGCGCTGCGCCAAAAGTTCGGATTGGCGGAACGAGAGAGCCTGCGCCATCGAATACGCTGCATTATCCTGGTCAGTCTTTCGATACTGCGGATTTTCCGGTGTAAGGAAAAGCGGCGAGTGCGCAATTACGCGAGTTTTGCCAGCACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCa                                                                                                                                                                                                                         <  2:227936/219‑1 (MQ=255)
                        ttttAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTTCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATTAGCAACAACGAGATTTTCCGGCAGTgg                                                                                                                                                                                                                     >  1:1122278/1‑239 (MQ=255)
                        ttttAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑CGAATATGGGGAACAACGAGCTTTTCCGGCCGTgg                                                                                                                                                                                                                     >  1:698166/1‑239 (MQ=255)
                         tttAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGa                                                                                                                                                                                                                    >  1:736683/1‑239 (MQ=255)
                         ttaaaGAATGCCTGGCTGAAACGGCTGCGGGAATGGATGCCGTAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGACCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGGGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGa                                                                                                                                                                                                                    <  1:416090/236‑1 (MQ=255)
                          ttAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCCGAACGGTTCCGG‑GGAATTTGGGAAACAACGAAATTTTCCGGCAGTGGaa                                                                                                                                                                                                                   >  2:1098747/1‑239 (MQ=255)
                          ttAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTAAGGCTTTCGATACTGCGAATTTTCCGGTGGAAGAAAAAGCGGCGATTGCCCAATTACGCCAGTTTTGCCAGACAGGGGCCGG‑AGAAAAGTAACAACAAAGAGGTTTTCCGGCAGTGGaa                                                                                                                                                                                                                   >  2:572480/1‑239 (MQ=255)
                                 tGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGGGACGG‑AGAATATGAGAAACAACGGGATTTTCCGGCAGTGGAAGGCACCa                                                                                                                                                                                                            >  2:1072717/1‑239 (MQ=255)
                                   ccTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGGTTTTCCGGCAGTGGCAGGCACCAg                                                                                                                                                                                                           >  1:476265/1‑238 (MQ=255)
                                   ccTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCAAGTTTTGCCAGAACGGAGCCGG‑AGAAAATGAGCAACAACGGGATTTTCCGGAAGTGGAAGGCACCCGc                                                                                                                                                                                                          >  1:326281/1‑239 (MQ=255)
                                             ccGGCCGGGGGGAGGGATGCCGGAGTTCGGCGCTGCGCCAAAAGTTCGTTGTAGCGGATCGATAGGGCCCTCGGCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCg                                                                                                                                                                                                 <  2:532585/237‑1 (MQ=255)
                                              cGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGc                                                                                                                                                                                               <  1:1370376/239‑1 (MQ=255)
                                                 cTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTATTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTCCGAAATTACGCCATTTTTGCCAGAACGGGGCCGG‑AGAATATGAGCAAAAACGAGATTTTCCGGCAGTGGAAGGAAccggttacttatacacata                                                                                                                                                                                            >  1:227936/1‑222 (MQ=255)
                                                        aaGGGGTGCCGGTGTGCGTCGCTGCGCCAAAAGGTCGTAGTAGCGGATCGATAGACCCCTCGCCATCCATTACGCTGAATTATCCGCGTCAGTCTTTCGATGCTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGc                                                                                                                                                                                      <  2:17461/238‑1 (MQ=255)
                                                                      tGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCCGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCGGGCAACGGAGGGGTTaac                                                                                                                                                                       >  2:196679/1‑237 (MQ=255)
                                                                        cGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGaa                                                                                                                                                                                                                   <  1:424433/193‑1 (MQ=255)
                                                                        cGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGaa                                                                                                                                                                                                                   >  2:424433/1‑193 (MQ=255)
                                                                        cGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAG‑TTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTAtcgc                                                                                                                                                                     <  1:1325666/238‑1 (MQ=255)
                                                                                cgcCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTAtcgccccgccgg                                                                                                                                                             >  1:1345306/1‑237 (MQ=255)
                                                                                  ccAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCCGGCAACGGCCGGGTTAtgccccccccgggg                                                                                                                                                           >  2:222342/1‑226 (MQ=255)
                                                                                         ttCGTAGTAGCGGATCGGTAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCAt                                                                                                                                                    <  1:342396/239‑1 (MQ=255)
                                                                                              agtagCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTAAGTCTTTCGATTCTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCtt                                                                                                                                               <  1:556691/239‑1 (MQ=255)
                                                                                                          aTAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCATTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTAt                                                                                                                                                                        <  2:330089/202‑1 (MQ=255)
                                                                                                               gctctttccttctatttcgtttaaTTATCCTCCGCAGTCGTTCCAAGCGGCCCATTTTCCGGTTGAAGAAAAAGCGGCGATGCGGAAATTACCCCAGTTTTGCCAGAACGGTGCCGG‑AGAATAGGGGCAACAACGAGATTTTCCGGCGGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGc                                                                                                                             <  2:698166/217‑1 (MQ=255)
                                                                                                                  cTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGTAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAg                                                                                                                           >  1:1368983/1‑238 (MQ=255)
                                                                                                                   tCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCCGCCGTTTGTCGGCAAGCCTGGCAACGGGCGGGGTATAGCCTCGCCAGGGCTTGCACCGCTTTTTGGCTGAAAA‑GCCGCAGgc                                                                                                                         >  2:583341/1‑239 (MQ=255)
                                                                                                                   tCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTAtcgcctcgcc                                                                                                                                                               <  2:1079656/202‑1 (MQ=255)
                                                                                                                   tCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTAtcgcctcgcc                                                                                                                                                               >  1:1079656/1‑202 (MQ=255)
                                                                                                                   tCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGgc                                                                                                                         >  1:1245396/1‑239 (MQ=255)
                                                                                                                    cGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGGACTTTTCCGGCAGTGGCAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGGGGGGTATCCCCCCCCCCGTGTCTGCATTGCTTGTTGGCGGaaaaactccagggg                                                                                                                         >  2:422950/1‑227 (MQ=255)
                                                                                                                     gCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGTTACTGCGCATTTTCCGGTGGAAGAAAATGCGACGATTGCGCAATTACGACAGTTTTGCCAGAACGGAGCCGG‑AGAATATGAGCAACAACGCGATTTTCCGGCAGTGGAAGGCCCCAGCCGTTTGTCGGGCAGCCTGGCAACGGACGGGTCATCGCCGCGCACGTCGCTGCGACGCCTATTGGCTGAACA‑Gcacagggccc                                                                                                                       >  2:554218/1‑230 (MQ=255)
                                                                                                                     gCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTTGCAACGGGCGGGTTATCGCCTCGCCACGGCTTGCACCCCTTTTTGGCGAAACA‑AACGCCGgcgc                                                                                                                       >  2:941234/1‑239 (MQ=255)
                                                                                                                     gCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGgcgc                                                                                                                       >  1:221730/1‑239 (MQ=255)
                                                                                                                     gCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGgcgc                                                                                                                       >  1:756755/1‑239 (MQ=255)
                                                                                                                        atccatTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGTCAACGGGCGGGTTATCGCCCCGCCAGTGCTTGCATCGCTTGTTGGGTGAACA‑GCCGGAGGGGCggg                                                                                                                    >  2:1367714/1‑239 (MQ=255)
                                                                                                                             ttACCCTGAATTTCCCCCGTCAGTTTTGTGATTCTGCGCATTTTCCGGGGGAAGAAAAAGCGGCGATTGCTCAATTCCGCCAGTTTGGCCAGAACGGTGCCGG‑AGAATATGAGCAACACAGAGTTTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGt                                                                                                               <  2:1105129/239‑1 (MQ=255)
                                                                                                                               aCGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGCCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGACCA‑GCTGCAGGGCCTGGACGGTgg                                                                                                             >  1:1262394/1‑239 (MQ=255)
                                                                                                                                 gCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAAAA‑GCCGAAGCCGCTGGACGGTggg                                                                                                            >  1:1140719/1‑238 (MQ=255)
                                                                                                                                 gCTGAATTATCCTCGTCAGTCTTTCGATACGGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACG‑GCCGCAGGCGCTGGACGGTgggg                                                                                                           <  1:341516/239‑1 (MQ=255)
                                                                                                                                  cTGAATTTCCCTCGTCAGCTTTTCGATTCGGGCCATTTTCCGGTGGAAGAAAAAGGGGCGATTGGCCAATTACGCCAGTTTTGCCAGAACGGGTCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGc                                                                                                          <  2:1345306/239‑1 (MQ=255)
                                                                                                                                   tGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGCCGGTGGGGcc                                                                                                         >  1:1239064/1‑239 (MQ=255)
                                                                                                                                     aaTTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGACCGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGCCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCgg                                                                                                       >  1:774395/1‑239 (MQ=255)
                                                                                                                                     aaTTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCgg                                                                                                       >  1:15520/1‑239 (MQ=255)
                                                                                                                                          tCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGc                                                                                                                             >  2:258193/1‑212 (MQ=255)
                                                                                                                                           cccctgctgtttttCGATATGGGGCTTTTTCCGGGGGAAGAAAAAGGGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATTTGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAgtgt                                                                                                 <  2:1245396/228‑1 (MQ=255)
                                                                                                                                           ccatgTCAGTCTTTCGATCCTGCGCATTTTCCGGTGGAAAAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCGCCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAgtgt                                                                                                 <  1:1021282/235‑1 (MQ=255)
                                                                                                                                               gTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGTAGGGCACCAGCCGTTTGTCGGCCAGCCTGTCAAAGGGCGGGTTATCGCCTAGCCATGGCTTGCACCGGGTGGTGGC‑GTACACGCCCGCGGCGCTGGAGGGTGGGGCggggggtggacgg                                                                                             >  2:1005844/1‑229 (MQ=255)
                                                                                                                                               gTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCCGTGCTTGCATCGCTTGTTGGCTGACAA‑GCCGCAGCCGCTGGCCGGGGGGGCCgggggggtccgg                                                                                             >  2:1097854/1‑229 (MQ=255)
                                                                                                                                               gTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCCCCAGGGCTTGCATCGCCTGTTGGCTGAAAA‑GCCGCCGGCGCGGGGCGGTGGGGCCGGTGGGGTCTgg                                                                                             >  2:802203/1‑239 (MQ=255)
                                                                                                                                                    tttttCGATTGTGCGCATTTTCCGGGGGAAGAAAAAGCGGCGATTGCGCAATTCCGCCAGTTTTGCCAGAAGGGTGCCGG‑AAAATATGAGCAACAACGAGATTTCCCGGCAGTGGAAGGCACCAGCCGTTTGCCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTaa                                                                                        <  2:1289101/237‑1 (MQ=255)
                                                                                                                                                    tCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGACCGGTGCAGG‑GGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTAGGCCAGCCTGGCAACGGGCGGGTTATGGCCTCGCCAGTGCTTGATCCTCTTTTTGGCTGGACA‑GCCGAAGGGGCCGGACGGGGGGGGCGGGAggggcgaggttaa                                                                                        >  2:509221/1‑227 (MQ=255)
                                                                                                                                                    tCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGGGTCTGGCTTaa                                                                                        >  1:259616/1‑239 (MQ=255)
                                                                                                                                                      tttcgaatcggggcATTTCCGGGTGAAAAAAAAAGGGGGGATTGCGCAATTGGCCCTGTTTTGCAAGAACGGGGCCGG‑AGAATATGGGCAACAACGAGATTTTCCGGCAGTGGAAGGCCCCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATg                                                                                      <  2:768380/227‑1 (MQ=255)
                                                                                                                                                      tttCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATg                                                                                      <  1:26461/239‑1 (MQ=255)
                                                                                                                                                       ttCGATACGGCGCTTTTTCCGGTGGAAGAAAAAGCGGCGATTGGGCAATTACGCCAGGTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAgtgt                                                                                                 <  2:812273/227‑1 (MQ=255)
                                                                                                                                                       tgcGATACGGCCCATTTTCGGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGACAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGAAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAgtgt                                                                                                 <  1:1180642/225‑1 (MQ=255)
                                                                                                                                                         cGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGCGCTTGCATCCCTTGTTGGGTGAACA‑GCCGCAGGCGGTGGCGGGGGGGGCCGGGAGGGGTTGGGTTAATgcgg                                                                                   >  2:1165626/1‑236 (MQ=255)
                                                                                                                                                              cTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCCGTGCTTGCATCGCCTGTTGGCTGAAAA‑GCCCCCGGCGCTGCGCGGGGGGGCCGGACGCGGCTGGCTTAATGacggtaag                                                                              >  2:1313557/1‑232 (MQ=255)
                                                                                                                                                              cTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCCTCCCTTGTTGGCTGAACA‑GCCGCAGGCCCTGGCCGGGGGGGCCGGTGGTGGCGGGCTTAATGAGCGGaac                                                                              >  2:1301569/1‑237 (MQ=255)
                                                                                                                                                              cTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGGTATCGCCTCGCCAGTGCTTGCCTCGCTTGTTGGCTGAACA‑GCCGCAGGGCCTGGAGGGGGGGGCCGGTAGGTTGTGGGTTAATGAggggagc                                                                              >  2:920681/1‑233 (MQ=255)
                                                                                                                                                               tGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAAAG‑ACCCCAGCCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGGGCTGa                                                                                >  1:811477/1‑236 (MQ=255)
                                                                                                                                                                 cgcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCCCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATgctttctctttt                                                                           >  1:812273/1‑228 (MQ=255)
                                                                                                                                                                 cgcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAAAA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTg                                                                            >  1:582509/1‑238 (MQ=255)
                                                                                                                                                                 cgcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCCTGTTGGGTTACAA‑GCCCCAGGGCCGGGACGGTGGGGCGCGGAGGGGTTGGCTTAATGGGcgtcatgg                                                                            >  2:792417/1‑231 (MQ=255)
                                                                                                                                                                  gcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGgc                                                                          <  1:1153011/239‑1 (MQ=255)
                                                                                                                                                                  gcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGgc                                                                          <  1:858338/239‑1 (MQ=255)
                                                                                                                                                                         ccGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTCAATCGCTTGTTGGCTGACCA‑GGCGCAGGCCCTGGACGGGGGGGCCGGGAGTGTCCGGTTTTTTTAGCTGATCCGGGGCGGGtt                                                                   >  2:694274/1‑239 (MQ=255)
                                                                                                                                                                         ccGGTGGAAAAAAAAGGGGGGGTTGCGAAAATACGGCAGTTTGCGCAGAACGGTGCGGG‑AGAATATGGGCAACAACGAGATTTGCCGGCAGTGGAAGGCACCAGCCGTTTGGCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGtt                                                                   <  2:1140719/239‑1 (MQ=255)
                                                                                                                                                                                aagaaAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGt                                                            >  1:320398/1‑239 (MQ=255)
                                                                                                                                                                                 agaaAACGCGGCGTTTGCGCAATTCCGCCGGTTTTGCGAGAAGGGGGCGGG‑GGAATATGCGCAACAACGAGAATTCCCGGCAGTGGAAGGCACCAGCCGTTTGGCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCGGTGCTGGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGt                                                            <  2:760630/238‑1 (MQ=255)
                                                                                                                                                                                 agaaAAAGCGGCGATGGGGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATGTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGt                                                            <  1:1313557/238‑1 (MQ=255)
                                                                                                                                                                                    aaaaGGGGGGTTTGGGCATTTACGCCCGTTTTGCCAGAACGGGGCCGG‑ATAATATGGGCAACAACGAGATTTGCCGGCGGTGGAAGGCACCAGCCGTTTGGCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCa                                                          <  2:1262394/237‑1 (MQ=255)
                                                                                                                                                                                       aggggcgGTTGCGCAATTACGCCAGTTTTGCCACAAAGGGGCGAG‑AGAATACGAGAAACACCGATGTTTGCTGGCAGTGGAAGTCCCCAGCCGTTGGTCGGCCTGCCTGGCGACGGGCGGGTTAGCTCCGCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTTTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGa                                                     <  2:1221309/236‑1 (MQ=255)
                                                                                                                                                                                          ggcgATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCACCAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCATCGCCCGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCCCTGGCCGGGGGGGCCGGTAGTGCCTGGGTTAATGGGCTGATCGTGGGCGGTGTTTACCGTCACCTGATa                                                   >  2:1267069/1‑238 (MQ=255)
                                                                                                                                                                                                        ttcccctttttccccgggaCGGTGCCGG‑AGAATATGACCAACAACGAGTTTTTCCGGTAGTGGAAGGCACCAGCCGTTTGTGCGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTTGTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTTTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCg                                    <  2:1169999/221‑1 (MQ=255)
                                                                                                                                                                                                        tccGCCAGTTTTGCCAGAACGGTGCCGG‑AAAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCg                                    <  1:851794/237‑1 (MQ=255)
                                                                                                                                                                                                        tACGCCAGTTTTGCAAGAGCGGTGCCGG‑AGAATATGACCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCg                                    <  1:627162/239‑1 (MQ=255)
                                                                                                                                                                                                        tACCCCAGTTTTGCCCGAACGGTGCCGG‑GAAATTGGGGCAAAACCGGGATTTTCCGGCATTGGAAGGCACGAGCCGTTTGTCGGCCAGCCGGGGAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCGTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCg                                    <  2:1031770/239‑1 (MQ=255)
                                                                                                                                                                                                         tcccgttttttGCAAGAGGGGGCCCGG‑AGAATATGAGCAACAGCGGGATTTTCCGGCAGTGGAAGGCACCAGCCGGTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGt                                   <  2:320398/232‑1 (MQ=255)
                                                                                                                                                                                                         tccccAGTTTTGCCAGAACGGGGCCGG‑AGAAAAGTGGCAACAACGAGGTTTTCCGGCAGTGGAAGGCCCCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGt                                   <  1:1267069/236‑1 (MQ=255)
                                                                                                                                                                                                         aacgcggTTTTGCCGGAACGGGTGCGG‑AGAATATGAGCAACAACGAGATTTGCCGGGCGTGGAAGGCCCCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCAAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGt                                   <  1:962014/233‑1 (MQ=255)
                                                                                                                                                                                                                   tGCCAGAACGGTGCCGG‑AGAAATTGGGGCACAACGGGATTTTCCGGGAGGGGTAGGCACCCGCCGTTTGGCGGCCCGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACa                         <  2:1368983/239‑1 (MQ=255)
                                                                                                                                                                                                                     ccAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATc                       >  1:161440/1‑239 (MQ=255)
                                                                                                                                                                                                                      cggAAGGGGGCCGGAAGAAT‑TGAGCAACAACGGTTTTGTCCGGGAGTGGAGGGCCCCAGCCTTTTGGCGGCCCGCCTGGCAACGGGGGGGTTATCGGCTCGCCAGTGCTTGCATCGCTTTGTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCg                      <  2:1346606/237‑1 (MQ=255)
                                                                                                                                                                                                                                ccGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGGGTAAACATCGTCCCttttt             >  1:1220625/1‑236 (MQ=255)
                                                                                                                                                                                                                                  gg‑AGAATATGAGCACCAACGAGCTTGTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGc          <  1:1125221/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tttGAGCAACAAGGGGTTTTTCCGGAAGGGGAAGGACCCAGCCGTTTTGCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTGGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGAc    <  2:161440/237‑1 (MQ=255)
                                                                                                                                                                                                                                         tatGGGCACCGACGGGATTTCCCGGAAGTGAAAGGCGCCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGGTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGAc    <  1:1195781/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tatGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATACCGTATCACCCCTCGTGGTGTAACATTCGTCCATTTATTGCCTggcc    >  1:211913/1‑237 (MQ=255)
                                                                                                                                                                                                                                         tatGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGAc    <  1:920681/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tatGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGAc    >  1:66389/1‑239 (MQ=255)
                                                                                                                                                                                                                                           tGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACgg  >  1:1094573/1‑239 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                             
CGAGATGTACAAAGTCTTTACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGG‑AGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACA‑GCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGG  >  NC_000913/739941‑740413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A