Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,825,164 |
A→T |
11.7% |
G154G (GGT→GGA) |
spy ← |
periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,825,164 | 0 | A | T | 11.7%
| 283.4
/ 2.7
| 118 | G154G (GGT→GGA) | spy | periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
| Reads supporting (aligned to +/- strand): ref base A (54/46); new base T (13/3); total (69/49) |
| Fisher's exact test for biased strand distribution p-value = 5.56e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 118 total aligned reads displayed.
TACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCA > NC_000913/1824937‑1825399
|
tACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑ACGGTTTTTTGCTGAAAGATTATTCATCAGTTGCAGG‑CATTTTA‑CCTTTTTcc > 1:376953/1‑237 (MQ=255)
cccGCCCCCGGCCTTTTTTTTTGTTTTTTACTGTACGGGTAAGCGTGGATGTTTACCGGCAACTGGGGTGTTTTACGTTAGTGGTGATCAGTTTTTTTTCACATCTTTTTGAGAAGAAAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTg < 1:38463/237‑1 (MQ=255)
tCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGGCTT‑TAGGTTTTTGCGTGAAAGATTTTTTAGCAGTTGCAGG‑CATTTTT‑CCTTTTTCCGCCgg > 2:1257382/1‑239 (MQ=255)
gCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGGTTT‑CAGTTTTTTGTCTGAAAGAATTTTAATACGTTTCAGG‑CCTTTTT‑CTTTTTTCCGCtcg > 1:587013/1‑235 (MQ=255)
gCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCAACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AACTTTTTTGGCTGAAAGATTATTCATCAGTTGCAGG‑CATTTTG‑CCTGTTGCCGCTGGAc > 1:1124079/1‑239 (MQ=255)
cGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGGCTT‑AAGGTTTTTGGCTTGAAGATATTTTACCAGTTGCAGG‑AATTTTT‑TCttttttccctgggctgttt > 2:1085637/1‑224 (MQ=255)
ttCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTGTTCAAGTTTTTTGTTTGAAGGA‑TATTCAGCAGGTGCCGG‑ACTTTTACCCTTTTCCCGCTgagcttctttcaga > 1:816048/1‑225 (MQ=255)
ttATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGGCTT‑AAGTTTTTTGTCTGTAAGATTATTTAGCAGTTTGAGG‑CATTTTT‑CCTTTTGCCTCTGGGCGTTCTTT‑CAG‑AAGCTT‑CTCaaaaa > 2:278358/1‑238 (MQ=255)
ggTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑TAATTTTTTTGCTGAAAGATTATTCTGCAGTTGCAGG‑CACTTTT‑CCTTTTTCCCCTGGACGTTCTTC‑TAG‑ACCCTT‑CTCACAATTA‑A‑C‑ATTaaa > 2:1226524/1‑239 (MQ=255)
gTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGGCTT‑AAGTTTTTTGGCTGAAAGAGTATTAAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTATGT‑CCG‑ACGCTT‑TCCCAAAGTA‑G‑C‑ATTAAAt > 1:1167278/1‑239 (MQ=255)
ccggggggtgtttacgggCAACTGGGTTGTTTTAGGTTAGTGGTGATGGGGTTTTTTTAACACTTGTTGGAAAAGAAAAAAAAAA‑C‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGc < 1:1200880/223‑1 (MQ=255)
aCCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTTAGCCGTTGCAAG‑CCTTTTA‑CCTTTTTCCGCTGGACGTTCTTT‑CCG‑ACGCTT‑TTCCAAATTT‑G‑C‑CTTTAAtttt > 1:430643/1‑237 (MQ=255)
cGTGGATGGTTATCGGCAACTCGGGTGATTGACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGAAGTGGACAAGACCGCGGGCTCTT‑CGGTTTTTTCG‑TTAAGGATTATTTAGCAGGTGGAGG‑GACTTTC‑TCTTTTTGCCCTGGGCGTTCTGT‑TAA‑ACCCTC‑CTCAAAAATA‑G‑A‑AATAAAATTCtt > 2:825722/1‑239 (MQ=255)
aTGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGCCAAGACCG‑GCGGTCTT‑AAGTTTTTTTGCTGAAAGATTTTTTAGCCGTTTCAGG‑CATTTTA‑CCTTTTTCGCCCGGAGGTTCTGT‑CCG‑AGCGTT‑TTCCAAATTA‑G‑C‑ATTCAATTGtttttttt > 1:1275387/1‑237 (MQ=255)
gttcgcgaactgggggttgtttACGTGTGTGGTGATCGTGTTTTTTTAACATCTTTGAGAGAAGAAAAAAAAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGtt < 1:1355270/219‑1 (MQ=255)
tATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGCAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGTCGTTTTGT‑CAA‑CAGCTT‑CTCACAATTA‑G‑C‑ATTAAAATCTGTTTTTTGTTcc > 1:32856/1‑239 (MQ=255)
gacacgtggtggATTTGCTTTGGTGGTGATCGGTTTTTTTTTACACGTGTTAGAGAAGAAAAAAAAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGt < 2:40510/228‑1 (MQ=255)
aCTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGGAAGATTATTCAGCAGGTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTTAATTGCTTTTTCTGTTCCGGCGTCA‑g > 1:159469/1‑239 (MQ=255)
cTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCCGG‑CCTTTTA‑CCTTTTTCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCCAAATTA‑G‑C‑ATTTAATTGCTTTTTCTTTTGCGGCGTCA‑gg > 1:40510/1‑239 (MQ=255)
cTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGGTTTTTTGCTGAAAGATTATTTAGCAGTTGCCGG‑CATTTTA‑CCTTTTTCCGCTGGACGTTTTTT‑TAG‑ACCCGT‑CTCAAAATTA‑GAC‑TTTAAATttttttttttttctgccggcacg > 2:136085/1‑224 (MQ=255)
cTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGGCTT‑AAGTTTTTTGGCTGAAAGATTATTCCGCCGGTGCAGG‑CATTTTT‑CCTTTTTCCGCTGGACGGTCTGT‑CAG‑AAGCCT‑CTCAAAATTATG‑A‑TTTAATTTGCTTTTTTTTTTCCgggccagg > 2:1114894/1‑233 (MQ=255)
tACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGAATATTCAGCAGTTGCAGG‑CCTTTTA‑CCTTTTTCCGCCGGACGTTTTGT‑CAG‑ACGCTT‑CTCAACATTA‑G‑C‑ATTAAATTTCTTTTTTTTTTTCGCCGGCA‑GGAGGTT‑G‑Taaaa > 1:1357860/1‑238 (MQ=255)
tACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGCCTT‑AAGTTTTTTTGCCGAAAGATTATTCAGCAGTTTCAGG‑CCTTTTA‑CCTTTTGCCGCTGGACGGTCTGT‑CAG‑AAGCTT‑CTCCAAATTA‑T‑C‑CTTTAATTTCTTTTTCTGTTCCGGCGTCA‑GGTGTTT‑G‑Taaaa > 1:1240299/1‑238 (MQ=255)
tgttttgacttgtttttttttACATTGGTTGGAAAAAAAAAAAAAAA‑C‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGtt < 2:1098981/225‑1 (MQ=255)
tgggtgtactgtttttttttACATCTGGTAGAGAAAAAAAAAAAAG‑C‑CCCCCTAGCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGAGCG‑GCGGTCTT‑AAGTTTTGTGGCTGAAAGAGTATTCAGCGGTTGCATG‑TAATTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑AAAATTTTGtt < 2:1181624/225‑1 (MQ=255)
gtggtgATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGAAGTGGACAAGACCG‑GCGGTCTT‑AAGGTTTTTGGCTGCAAAATTATTCAGCAGTTGCAGGCCTTTTTA‑CCTTTT‑CCCCTGGACGGTCTGT‑CTG‑AAGCTTCCTCAAATTTC‑T‑C‑‑TTTAATTTCTTTTTTTTTTTCGGGGGCC‑GGAGTGT‑G‑TAAATttttttt > 2:1050140/1‑238 (MQ=255)
tggtgATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGGAAGAGTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTTCCGCTGGGAGTTTTGT‑CAG‑ACGGTT‑CTCAAAATTA‑G‑C‑ATTAAATTTCTTTTTCTGTTTCGGCGTCA‑GGAAGTT‑G‑TAAATTTTGt > 1:951036/1‑236 (MQ=255)
aTCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑TAGTTTTTTTGCTGAAAGATTATTTCGCAGTTGCAGG‑CATTTTT‑CCTTTTTCCGCTGGGCGTTCTTT‑CAG‑ACCCTT‑CTCAAAATTA‑G‑C‑ATTTAATTTGTTTTTTTTTTTCTGCGTCC‑GGGTTTT‑T‑TAAATTTTTTTTTGGGtt > 2:1122507/1‑239 (MQ=255)
aTCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTTGCTGGAAGATTATTTAGCAGTTTCAGG‑CATTTTA‑CCTTTTTCCGCCGGGCGTTCTGT‑CAG‑ACGCCT‑CTCAAAAATA‑A‑C‑CTTTAATTTGTTTTTCTGTTCCCGCGTGAGGGCTTTT‑T‑TAAATtttttttgtgtt > 2:61071/1‑233 (MQ=255)
aTCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTTGCTGAAAGGATATTCAGCAATTTTAGG‑CATTTTT‑TCCTTTGCCGCTGGTCGTTTCTT‑TAG‑CACCTT‑CTCAAAATTA‑G‑C‑TATAAATTTCTTTTTCTGTTTCTGCGTCC‑GGCAGTT‑T‑TAAAATTTGTTTTGGGtt > 2:50946/1‑239 (MQ=255)
ggCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAATTTTTTGGCTGAAAAATTATTTAGCAGGTGCAGG‑CATTTTA‑CCTTTTTCCGCTGGACGTTCTTT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTTAATTGCTTTTTCTGTTTCGGCGTCC‑GGATGTT‑G‑TAAATTTTGTTCTGGGtttt > 1:1228476/1‑236 (MQ=255)
ttttttttACAATTGTTTGAAAAAAAAAAAAAAACA‑CCGCCCATCCTGTCCACCTCATTACTGGAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCAt < 2:816048/238‑1 (MQ=255)
tttttttACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCATCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAAGTTTTTGCCTGGAAGATTATTCATCGCTTGGAGG‑CATTTTA‑TCTTTTTCCGCAGGCGGTTTTTT‑TAG‑ACGATT‑GCCCAAATTA‑T‑C‑ATTAAATTGCTTTTTCTGTTCCTGCGCCA‑GGAGGTT‑T‑TACATTTTGTGTTGGGGTTcctgtt > 2:741709/1‑235 (MQ=255)
ttttACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGGCGGTCTGT‑CAG‑ACGCCT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTTTGTTCCGGCGTCA‑GGGTGTT‑G‑TAAATTTTGTTCTGGGGTTCCATTTgc > 1:138886/1‑238 (MQ=255)
ttttagaaaaagaaaaaaaaa‑a‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGt < 1:1065352/226‑1 (MQ=255)
tttGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑TAGTTTTTTTGCTGAAAGATTATTCAGCAGGTGGAGG‑GATTTTT‑ACTTTTTCCGCTGGACGGTTTTT‑CAG‑AAGCTT‑CTCAAAATTA‑A‑CAATAAAATTTCTTTTT‑TTTTTTGGCGGCA‑GGATGTT‑G‑TAAAATTTTTTTTGGGGTTTCAtttggggccccatggta > 2:1006902/1‑226 (MQ=255)
tGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTTGGTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑TCTTTTTCCGCCGGACGTTCTGT‑CAT‑GAGCGT‑CTCAAAATTT‑G‑C‑ACTAAAATTCTTTTTTTTTTTCGGGGGCC‑GGAGTTT‑G‑TAAAATTTGTTCTGGGttttccttttggcccccaatttg > 2:146550/1‑217 (MQ=255)
agaaaaAAGAAA‑T‑CCGGCGGTCCTGTCCACCGGATTTCGGCAAGGTGGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTgc < 2:32856/239‑1 (MQ=255)
aaaaaaaaaaa‑a‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTGTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTgcg < 1:1174510/236‑1 (MQ=255)
agaaaaggac‑ACCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGGCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGGTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTgcg < 1:1306048/239‑1 (MQ=255)
aaaaaaaaaacgccgccgTTCCTGTCCCACGGATTACTGCAAGGTAGTGGAAAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTgcg < 2:376953/227‑1 (MQ=255)
ccTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCg < 1:278358/238‑1 (MQ=255)
ctttCCCCCGCATTACTGCAAGGTAGTGGACAAGACCG‑GGGGTTTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGAt < 2:1228476/236‑1 (MQ=255)
cTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGAt < 1:1095947/239‑1 (MQ=255)
cTGGCCCCCGCATTACCGCAAGGTAGTGGACAAGGCCG‑GCGGTCTT‑AAGTTTGTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGAt < 2:978142/239‑1 (MQ=255)
gTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTTGCTGGAAGATTATTCAGCAGGTGCAGG‑CCTTTTA‑CCTTTTTCCGCTGGACGGTCTGT‑CAA‑ACGCTT‑CTCAAAAATA‑A‑C‑CATTAATTTCTTTTTTTTTTCCCGCGTCC‑TGTGGTT‑T‑TAAAATTTGTTTTGGGGTTTCCTGTTCCCCAGCA‑AGGTAGCTTTTCCGTTTTTTTCCCtttttttggttt > 2:921162/1‑232 (MQ=255)
tcccacGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTg < 1:1336437/234‑1 (MQ=255)
ccagttACTGCAAGGTAGGGGACAAGACTG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGATTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCtt < 1:908689/235‑1 (MQ=255)
cGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTTTT‑AAGTTTTTTGGCTGAAAGATTATTTCGCAGTTGGAGG‑CATTTTA‑CCTTTTTTCGCTGGGAGGTCTTT‑CCG‑ACGCTT‑TTCAAAATTA‑A‑C‑CTTTAATTGCTTTTTCTGTTCCTGCGGCC‑GGGGGTTGG‑TAAATTTT‑TTCTTGGTTTTCCTTTGGGCCCGCC‑GGTTAGCTTTGCGCTGTTTTTTCAtttttttggtatggggt > 2:691631/1‑226 (MQ=255)
cGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTTGCTGGAAGATTATTTAGCAGTTGCAGG‑CCTTTTT‑CCCTTTTCCCCCGGACGTTCTTT‑CCG‑ACGCTT‑TTCAAAATTA‑G‑A‑CTTTAATTGCTTTTTTTGTTCCCGCGTCC‑GGATGTT‑T‑TAAATTTTGTTTTTGGTTTTCCTTTTCGCCAGCC‑TTTTGACTTTTGCCTGTTTTTCCATTTTTTCGATTTGCGCt > 2:582178/1‑238 (MQ=255)
cGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGCCTT‑TTGTTTTTTGGGTGAAAGGTTATTCAGCAGATGGAGG‑CATTTTT‑CCTTTTTCCGCTGGCCGGTCTGT‑CAG‑ACACTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTTTGTTTCGGCGTCA‑GGGTGTT‑G‑TAAATTTTTTTTTGGGTTTTCATTGTCGCCCGCA‑TGTTAACTTTGAGCTGTTTTTCCATTTTTTTGATCTgcggt > 2:932770/1‑236 (MQ=255)
gCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTc < 1:574006/239‑1 (MQ=255)
tACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CCTTTTA‑CCTTTTTCCGCTGGACGTTCTGT‑TAA‑ACGCTT‑CTCCAAATTA‑G‑C‑ATTTAATTGCTTTTTTTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTTTTTTGGGTTTTCTTTTGGGCCCGCA‑TGTTAGCTTTGCGCTGTTTTTCCATTTTTTCGATTTGCGCTTCCGCt > 2:471777/1‑239 (MQ=255)
cAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGAAGTTGCAGG‑CATTTTA‑ACTTTTGCCGCTGGACGTTTTTT‑CAG‑AAGCTT‑CTCCAAATTA‑G‑C‑ATTAAATTTCTTTTTCTTTTCCGGCGTCA‑GGAGGTT‑G‑TAAATTTTGTTCTGGGTTTCCCTGTGCGCC‑GCACTGTTAGCTTTGCGCTGTTCTTCCCTTTTTTCGATCTGCGCTTCCGCtttt > 1:1155205/1‑237 (MQ=255)
aaGGTAGTGGACAAGGCCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACt < 1:541928/239‑1 (MQ=255)
aGGTAGTGGACTAGACCG‑GCTGTCTT‑AAGTTTTTTGGCTGAAAAATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTGGGCGGTGGACGTTCTGT‑CAG‑GCGCTT‑CTCAAAATTA‑G‑C‑ATGAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTTTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACt < 1:1089417/238‑1 (MQ=255)
tAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCAttttt < 1:850627/211‑1 (MQ=255)
tGGACAAGGCCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGa < 1:471777/239‑1 (MQ=255)
tGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑TTCAAAATTA‑G‑C‑ATTAAATTGCCTTTTTTGTTCCGGCGTCA‑GGATGTT‑G‑TAAACTTTGTTCTTGGTTTCCATGTCGGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCCTTTTTTCGATTCTCCCTTCCCCCTTTACTTTTTcta > 1:1043413/1‑237 (MQ=255)
tGGACAAGACCG‑GCGGTCTT‑AAGGTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGCTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTTTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTTTTCTGGGGTTCCATGTGCGCCAGCA‑TGTTAGCTTTTCGCTGTTCTTCCATTTTTTCGGTCTGCGCTTCCGCTTTTACTTTATCGa > 1:744947/1‑239 (MQ=255)
gACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGcc < 1:451964/173‑1 (MQ=255)
aaGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTTTGGGTTTTCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTTCGATCTGCGCTTCAGCTTTTACTTTTTCGAAGGt > 1:309303/1‑238 (MQ=255)
gACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCCTGTGCGCCATAC‑TGTTACCTTTTGGCTGTTTTTCCATTTTTGCGATTTGCGCTTCAGCTTTTTCTTTATTGAAGGAAt > 1:162436/1‑238 (MQ=255)
gACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGAGGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTTCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATc > 1:794645/1‑239 (MQ=255)
gACCG‑GCGGTCTT‑AAATTTTTTTGCTGAAAGATTATTTAGCAGTTGCAGG‑GATTTTT‑CCTTTTGCCCCTGGACGTTTTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGTTTTTTTTGTTTCGGCGGCT‑GGAGGTT‑G‑TTAATTTTGTTTTGGGTTTCCTTTTTCGCCAGCA‑TGTTAGCTTTGTGCTGTTTTTCCCTTTTTTCGGTTTGCGCTTCACCTTTTCCttttttgtagggttc > 2:302938/1‑227 (MQ=255)
cg‑gcggTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCt < 1:1122507/239‑1 (MQ=255)
cg‑gccgTCTT‑AAGTTTTTTTGCTGAAAGATTATTCAGGAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CGCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCt < 1:302938/239‑1 (MQ=255)
gcggTCTT‑AAGTTTTTTTGGTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTT‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGGGGTT‑GTTAATTTTTTTTTTGGGTTTCCATTTTCGCCACCC‑TTTTAGCTTTTCGCGTTTTTTCCCTTTTTTCGATTTTCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTg > 2:141695/1‑239 (MQ=255)
tCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCaa < 1:136085/238‑1 (MQ=255)
cTT‑AAGTTTTTTTGCTGAAAGATTATTCAGCAGGTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CGG‑ACGATT‑CTCAAAATTA‑T‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:664586/239‑1 (MQ=255)
cTT‑AAGTTTTTTGGCTGAAAGGTTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:72366/239‑1 (MQ=255)
cTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:146550/239‑1 (MQ=255)
cTT‑AAGGTTTTTGGCTGAAAGGTTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:1085637/239‑1 (MQ=255)
ttttaGTTTTTTGGCTTAAAGATTATTCCGGATTTGCAGG‑CATTTTT‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 2:197230/235‑1 (MQ=255)
tttagtgtttttGTCTTAAAGATTTTTCAGCAGGTGGAGG‑CGTTTTT‑CCGTTTGCCTGTGGAC‑TTTTGTGCAG‑ACGCTT‑CTTAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGGCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 2:1275387/232‑1 (MQ=255)
ctttatttttttGGTGTAAAGTTTATTCAGCAGTTGTAGG‑CATTTTT‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCTGCA‑GGATGTT‑G‑TAAATTTTGTTCGGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 2:1378050/233‑1 (MQ=255)
gTTTTTTTGTTTAAAGATTATTAAGCGGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGCCGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTTTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTc < 2:1124079/239‑1 (MQ=255)
tttttGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTc < 1:61071/237‑1 (MQ=255)
tttGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGCTGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGGCagga > 2:535468/1‑236 (MQ=255)
tttGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTTTTCCATTTTTGCGGTCTGCGGTTCAGCTTTTACTTTATTGAAGGTATCGTTGCCAaagattcatagc > 2:739890/1‑232 (MQ=255)
tttGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTG‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAGGGGATCCCTGGCAATGATGTccg > 1:1378050/1‑235 (MQ=255)
gAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg > 1:317871/1‑223 (MQ=255)
gAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTAATGCATTgtgc > 1:220052/1‑239 (MQ=255)
gAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTGCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 2:317871/223‑1 (MQ=255)
tattCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGACTTCATGCATTGCGCGGGGt > 2:1064551/1‑237 (MQ=255)
attCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTAGGCTTTTACTTTATCGAAGGCATCGCTGGCAATGAGGTCATCAATTGCGCGGCGttc > 2:605415/1‑238 (MQ=255)
ttCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 2:1210286/214‑1 (MQ=255)
cagTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCCCGGCGTCCTTCCAgc > 1:483971/1‑239 (MQ=255)
agTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCATTGATGTCATTCATTTCGCGGGGTTTTTCCAgcg > 2:1048620/1‑239 (MQ=255)
agTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcg > 2:311373/1‑239 (MQ=255)
ttGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggc > 1:1321102/1‑239 (MQ=255)
tGCAGG‑CATTTTA‑CCTTTTGCCGCTTGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg < 1:50946/239‑1 (MQ=255)
tGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg < 1:344191/239‑1 (MQ=255)
gCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGtt < 1:1360695/104‑1 (MQ=255)
gCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGtt > 2:1360695/1‑104 (MQ=255)
cATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGt < 1:125595/238‑1 (MQ=255)
tttA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg < 2:1100620/230‑1 (MQ=255)
tttA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg > 1:1100620/1‑230 (MQ=255)
tttA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCa > 1:789797/1‑239 (MQ=255)
tttA‑CCTTTTGCCGATGGACGTTCTGG‑CGGTACG‑TT‑CTCAAAATTA‑G‑C‑ATTGAATTGGTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTTCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCa < 1:888338/239‑1 (MQ=255)
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TACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑A‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTT‑AAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGG‑CATTTTA‑CCTTTTGCCGCTGGACGTTCTGT‑CAG‑ACGCTT‑CTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCA‑GGATGTT‑G‑TAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCA‑TGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCA > NC_000913/1824937‑1825399
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
