Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,141,475 A→G 10.0% L249P (CTC→CCC)  frwA ← putative PTS enzyme: Hpr, enzyme I and II components

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,141,4750AG10.0% 396.8 / 3.1 145L249P (CTC→CCC) frwAputative PTS enzyme: Hpr, enzyme I and II components
Reads supporting (aligned to +/- strand):  ref base A (71/55);  new base G (12/6);  total (84/61)
Fisher's exact test for biased strand distribution p-value = 4.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 145 total aligned reads displayed.

TGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGTCGCTATCCAGCAGACGAAACT  >  NC_000913/4141238‑4141709
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                             
       gcCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGGGCCGGGAAGCGTTTCCAACCGGAGATTTGCTGGGGTAACggg                                                                                                                                                                                                                                       >  2:660894/1‑239 (MQ=255)
              aGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCa                                                                                                                                                                                                                                  <  1:223822/237‑1 (MQ=255)
                      cATCAATATCCACGCCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTcgc‑g                                                                                                                                                                                                                       <  1:1087297/238‑1 (MQ=255)
                       ataaaagacaggcccaaccaGGGTTGGAATTGTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑Gt                                                                                                                                                                                                                      <  1:567322/225‑1 (MQ=255)
                        tCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGGAGCAGA‑CGTCGC‑GTAc                                                                                                                                                                                                                    >  1:138308/1‑239 (MQ=255)
                        tCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTCTTGGGGTAACTGGAACCAGA‑CGTCGC‑Gtc                                                                                                                                                                                                                     >  1:863313/1‑237 (MQ=255)
                        tCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAAAGGCGGGTGGCGTCAGTTTGCCCGGGGCCGGGAAGGGTTGCTCACCGGCGGTTTGCTGGGGTACATGGGAGCAGA‑Cggacggcac                                                                                                                                                                                                                     >  2:866437/1‑231 (MQ=255)
                           attcccACCCCAACCGGGTTTGGAATTGTGACGGAACGGGCAAGGATCCCCGTATTTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTc                                                                                                                                                                                                                 <  2:452823/235‑1 (MQ=255)
                                  ccccaacccGCGTTGGAATGTTGAAGGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCa                                                                                                                                                                                                          <  1:1057989/237‑1 (MQ=255)
                                    ccaaccaGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTAGGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACg                                                                                                                                                                                                        <  1:417493/239‑1 (MQ=255)
                                      aaccaGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGtt                                                                                                                                                                                                      >  1:60568/1‑239 (MQ=255)
                                       accaGCTTTGGAATTTGGAACTAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGCCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTGGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTc                                                                                                                                                                                                     <  1:1195417/239‑1 (MQ=255)
                                       accaGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACgg                                                                                                                                                                                                       >  1:460475/1‑236 (MQ=255)
                                       accaGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTAACCGGAGATTTGCTGGGGAAACTGGAAGCAGA‑GGGCCC‑TAACGGCCAGGGACCGttt                                                                                                                                                                                                     >  2:1371134/1‑238 (MQ=255)
                                          aGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTGGGTTTGCTGGAGTAACTGGAACCCGA‑CGTCCC‑Gttacgccacggcccgtttttc                                                                                                                                                                                                  >  2:315945/1‑219 (MQ=255)
                                            cGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGGAGCGTTGCTCACCGTAGATTTGTTGGGGAAACTGGAAGGAAA‑CGCTGC‑GAACGCCCAggggagggtgtggtg                                                                                                                                                                                                >  2:406739/1‑227 (MQ=255)
                                               tGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGt                                                                                                                                                                                             <  1:1244484/239‑1 (MQ=255)
                                                      ttGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGCTTTTTATCCAGTTCAAGGAACTGGCTGGGGGTCAGTTCATCAGCCATAAAAATGGCGGGCTGCGCCAGTTGGCCCGGGACCGGGAACCGTGGCTCACCGTAGATTTGCTCGGGTAACTGGAAACACA‑CCTCGC‑GTACGCCCAGGCCCCGTTCTTGCAggcaagtgcc                                                                                                                                                                                      >  2:732839/1‑231 (MQ=255)
                                                      ttGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAACTGGCGGGCTTCGTCAACTTGCCCGGTGCCGGGGAGCGTTGGACACCCGAGGTTTGCTGGATGAACCTGAAGCAGA‑CG‑CGCGGTACGGCCAAGGGACGCACTTGCCggggaagggg                                                                                                                                                                                      >  2:933268/1‑231 (MQ=255)
                                                      ttGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCACACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAAc                                                                                                                                                                                                                                          <  2:518203/189‑1 (MQ=255)
                                                              acgGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTAAGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGTTGGAAc                                                                                                                                                                             >  1:278382/1‑239 (MQ=255)
                                                                           aCCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGGCCAGGGCACGTTCTTGCAGGAAGCTG‑CGGGTGGAACGGGTAAACCCtt                                                                                                                                                                 >  2:113370/1‑238 (MQ=255)
                                                                            ccGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCGGCGTCAGTTTGCCCGGGGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGGGTAACTGGGAGCCGA‑CGTCGC‑GACCGTCCAGGGAACGGCCTTGCAGGGAGCTG‑GGGCTGGGAGGGGAAAACTCttgg                                                                                                                                                               >  2:344099/1‑237 (MQ=255)
                                                                              gTAGGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCa                                                                                                                                                             <  1:866437/239‑1 (MQ=255)
                                                                                 tgtgAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACTGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCaaaa                                                                                                                                                          >  1:828549/1‑239 (MQ=255)
                                                                                 tgtgAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGGAGCAGA‑CCGCGC‑GTACGTCCCAGGCCCCTTCTTGCAGGTACCTG‑CTGCCGGGACGGGAAAAACCTTCCCaaaa                                                                                                                                                          >  2:747869/1‑239 (MQ=255)
                                                                                       gtggtgCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGGCCGGTGCCGGGAAGCGTTGCTCACCGTAGGTTTGCTGGGGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCCCGGTCTTGAAGGTAGCTG‑CTGGTGGAACGGGAAAAATCTTTGCAAAAAGGAtt                                                                                                                                                    >  2:1018127/1‑239 (MQ=255)
                                                                                       gtggtgCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGGTTTGCTGGAGTAACTGGAAGCAGA‑CGTGCC‑GTACGTCCAGGGCACGTTCCTGCAGGGAGCTG‑CTGCTGGGACGGGAAAACTCTTCGCAAAAGAGAtt                                                                                                                                                    >  1:1305069/1‑239 (MQ=255)
                                                                                         ggtgCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGAGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGGCAGTTTGCCCGGTTCCGGGAAGCGTTGCTGACCGGAGAGTTGCTTGAGCAACTGGAATCAGA‑CTTCGC‑GGACGTCCCGGGGACGGTGTTGCCGGTAACTG‑CCGACTGAACGGGAAAAcatctccacaaagatattc                                                                                                                                                   >  2:383709/1‑220 (MQ=255)
                                                                                          gtgCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGGGATTcc                                                                                                                                                  >  1:19434/1‑237 (MQ=255)
                                                                                          gtgCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGCAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTcg                                                                                                                                                  >  1:67728/1‑238 (MQ=255)
                                                                                            gcctccGCTTTTGGGCGAGAATCCGTTGAGGTGATTGTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATGAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTcgcg                                                                                                                                                <  1:483985/238‑1 (MQ=255)
                                                                                                 cggttttGGGCAACAATCCTTTGAGGTGATTTTTACCCAGTTCGGGGAACGGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGca                                                                                                                                          <  2:945889/236‑1 (MQ=255)
                                                                                                           caacaaTCCTTTGGGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTGGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCt                                                                                                                                 <  1:399964/238‑1 (MQ=255)
                                                                                                            aacaaTCCTTTGAGGTGATTTTTAACCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAGTGGCGGGCTGCGTCAGTTTGCCCGGTGGCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCtt                                                                                                                                <  1:383709/238‑1 (MQ=255)
                                                                                                                ttCCTTTGGGGTGTTTTTCATTCGGTTCGAGGAATGGGCTGGGGGTCAGTTCATCAGCCATACAAACTGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGgcg                                                                                                                           <  2:470846/238‑1 (MQ=255)
                                                                                                                aTCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGgcg                                                                                                                           <  1:978260/239‑1 (MQ=255)
                                                                                                                 tCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGAAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGGGATTCGCCCTGGCAACAATTGCTTCgcccc                                                                                                                          >  1:409523/1‑235 (MQ=255)
                                                                                                                        aGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAAt                                                                                                                                     >  2:358746/1‑221 (MQ=255)
                                                                                                                        aGGTGATTGTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAATGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAAt                                                                                                                                     <  1:358746/221‑1 (MQ=255)
                                                                                                                         ggTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCCGTTTGCCCGGTGCCGGGAAGCGTTGCCTACCGGAGATTTGCTGGAGTAACTGGAACACGA‑AGTCCC‑CTACCCCCAAGGACCGTTCTTGCAGGTCGCTGCCTGC‑GGAGAGGGGAAACTCTTCGCAAAAGTGGTTCGCGCTGGGAACAATTGCTTCGGCGCAGCATaa                                                                                                                   >  2:193970/1‑238 (MQ=255)
                                                                                                                             aTTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCCCAGCTTAATCCg                                                                                                               >  1:1047254/1‑238 (MQ=255)
                                                                                                                             aTTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGAAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGGGATTCGCGCTGGCAACAATTGCTTTGGCGCAGCTTAATCCg                                                                                                               >  1:255387/1‑238 (MQ=255)
                                                                                                                                         ttCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGGAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGGTCTTGCAGGTAGCTG‑CTGCTTGAACGGGAAAACTCTTACCCAAAGTGATTCGCGCTGGCAAAAATTGCTTCGGCGCCGACTAAACCGGGCCTGGCGccg                                                                                                   >  2:129464/1‑237 (MQ=255)
                                                                                                                                                   tggctggGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCCCTGACGCCTGCCAGTAAATg                                                                                        >  1:952733/1‑239 (MQ=255)
                                                                                                                                                   tggctggGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGGAACTGGAAGCAGA‑CGTCGC‑GTACGCCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGGGCAGCTTAATCCGGCGCTGACGCCTGCCAGTaaagg                                                                                        >  1:342773/1‑237 (MQ=255)
                                                                                                                                                     gctggGTGTCAGTTCCTCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGc                                                                                                 <  1:1312148/228‑1 (MQ=255)
                                                                                                                                                     gctggGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACCCTTCGCAAAAGTGATTCGCGCTGGCCACAATTGCTTCGGGGCCGCTTAATCCGGGGCTGGCCCCTGCCAGGaaaagat                                                                                      >  2:1015022/1‑235 (MQ=255)
                                                                                                                                                        gggggTCAGTTCCACAGCCATACAAAGGGGGGGCTGCGGCAGTTTGCCCGGTGCCGGGAAGCGTTGCCCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTcg                                                                                    <  2:460475/238‑1 (MQ=255)
                                                                                                                                                         ggggTCCGTTTACTAGCCCTAAAAAGGGGGGGGTGTGTCAGTTCGCCCGGGTCAGGGAAGCGTTGCTCACCGTAGATTTGCGGGAGTAACGGGAAGCCGC‑CGTCGC‑GTACGACCAGGGCCCGTTCTTTGAGGTAGCTG‑CTGCTGGAACGGGAAAACTGTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGGAGCTTAATCCGGCGCTGAGGCCTGCCAGTAAATGTTcgcg                                                                                  <  2:1167808/239‑1 (MQ=255)
                                                                                                                                                          gggTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTTgcgc                                                                                 >  1:340754/1‑239 (MQ=255)
                                                                                                                                                          gggTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTGGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTcgcg                                                                                  <  1:1018127/238‑1 (MQ=255)
                                                                                                                                                          gggTCAGTTCAGCAGCCATACAAATGGCGGGCTTGGTCAGTTTGCCCGGTTCCGGGAAGCTGTGCTCACCGTAGATTTGCTTGAGTAACTGGAAGCCGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTcgcg                                                                                  <  1:51930/238‑1 (MQ=255)
                                                                                                                                                            ggccgtttctcaGCCATGCTAATGGCGGGCTGCATTAGTTGGCCCGGGGCCGGAAAGCGTTTCCTGCCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAACCTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGGTCGCGCa                                                                                <  2:81162/229‑1 (MQ=255)
                                                                                                                                                               aGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGACCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGGGATTCGCGCCGGCAACAATTGCTTCGGCGCAGCTTAAACCGGGGCTGCGGCCTGCCCGTAAAAGttttgtctctta                                                                            >  2:1312148/1‑229 (MQ=255)
                                                                                                                                                                      caGCCATACAAATGGCGGGCTGCGTCAGGTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCg                                                                     <  1:25313/239‑1 (MQ=255)
                                                                                                                                                                         ccATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGGCGCTG‑CTGCTGGAACGGGAAAACTCTTCGCCAAACTGATTCGCGCTGGCAACAATTGCTTCGGCGCACCTTAATCCGGGGCTGACGCCTGCCAGAAAATATTCACGCAGGGAAATATCgccg                                                                  >  2:395929/1‑238 (MQ=255)
                                                                                                                                                                           aTACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGGGCTGCCGCCTGCCAGCAAATGTTCGCGCAGGGAAGTATCgccac                                                                 >  1:746761/1‑237 (MQ=255)
                                                                                                                                                                           aTACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCgccag                                                                 >  1:1506/1‑238 (MQ=255)
                                                                                                                                                                           aTACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACCGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCACCAATTGCTTCGGGGCAGCTTTAACCGGGGCTGACACCTGCCACGAAAATTTCGCGCAgggggggaacgcacca                                                                >  2:25313/1‑226 (MQ=255)
                                                                                                                                                                           aTACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGACGC‑GGACGTCCAGGGCACGTTCTTGCAGGAAGCTG‑CGGCTGGAACGGGGAAAATCTTCGCAAAAGGGATTCGCGCTGGCAACACTTGGTTAGGGGCAACTTAATCCGGCGCTGCACCCTGCCAGAAAAGGTTccgcacggggagaatatccccc                                                                >  2:227068/1‑218 (MQ=255)
                                                                                                                                                                                   ggCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCCGCTTAATCCGGCGCTGACGCCTGCCAGGAAATGTTCGCGCAGGGAAGGATCGCCAGCCCGGGagc                                                        >  2:897131/1‑237 (MQ=255)
                                                                                                                                                                                   ggCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGGGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGGAACGCCAGCCCGGGacc                                                        >  1:888710/1‑237 (MQ=255)
                                                                                                                                                                                   ggCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATc                                                        >  1:750879/1‑239 (MQ=255)
                                                                                                                                                                                      gggCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCGGACGCCCGCCCGTAAACTTTCGCGCAGGGAAGTAACGCCAACCAGGGAGCggg                                                     >  2:1301068/1‑238 (MQ=255)
                                                                                                                                                                                      gggCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTCGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGt                                                     >  1:1034772/1‑239 (MQ=255)
                                                                                                                                                                                        gCTGCGTCAGGTTGGCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACGGGAAGCAGA‑CGTCGC‑GTACGCCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTg                                                    <  1:113370/238‑1 (MQ=255)
                                                                                                                                                                                         cTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGTCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGa                                                   <  1:395929/238‑1 (MQ=255)
                                                                                                                                                                                         cTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCACCAATTGCTTCTGCGCAGCTTAATCCGGCGCTGGCGCCTGCCAGCAAATGTTCGCGCAGGGAAGGATAGCCAGCCAGGGAACgggggg                                                  >  2:339161/1‑235 (MQ=255)
                                                                                                                                                                                         cTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGa                                                   <  1:897131/238‑1 (MQ=255)
                                                                                                                                                                                                  tttGCCCGGTGCCGGGAAGCTGTGCTCACCGTAGATTGGCTGGAGTAACTGGAAGCAGA‑TGTCGC‑GTACGTCCATGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGaa                                         <  1:359868/239‑1 (MQ=255)
                                                                                                                                                                                                  tttGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCCCAGCTTAATCCGGGGCTGACGCCTGCCAGTAAATGTTCGCGCGGGGAAGGATCGCCAGCACGGGATCGGTGGGCTCCCAGa                                          >  2:731051/1‑238 (MQ=255)
                                                                                                                                                                                                   ttccccGGTGCCGGGGAGGTTTGCTCTCCGTAGATTTGGTGGGGTAACTGGAACCCGA‑CGGCGC‑GTGCTGCCAGGCCACGTTCTTGCAGTTAGCTG‑CTGCTGGACGGTGAAAACTCTTCGCAAAAGGGTTTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTACTCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAAt                                        <  2:1305069/236‑1 (MQ=255)
                                                                                                                                                                                                   ttGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAAt                                        <  1:1301068/239‑1 (MQ=255)
                                                                                                                                                                                                   ttGCCCGGGGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGa                                          <  1:1301501/237‑1 (MQ=255)
                                                                                                                                                                                                      ccgggTGCCGGGAAGCCGTGCTCCCCTGAGGTTTGGTGGAGTTATGGGAAGCAGG‑GTTGCC‑TTGCGTCCAGGGCCAGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAACCTCTTCGCAAAAGGGATGCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATcgc                                     <  2:255387/236‑1 (MQ=255)
                                                                                                                                                                                                      cccagggccgtggatcttttcTCATCGTTGATTTGGTGGGATAACGGGGAG‑AGAGCGGCTC‑GTGCGTACAGGGAACGTTGTTGCAGGTAGCTG‑GTGCTGGAACCGGAAAACTCGTCGCAAAAGTGATTTGCGCTGGCGACAATTGCTTCGGCGCAGCTTAATCCGGCGCGGTCGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATcgc                                     <  2:628183/219‑1 (MQ=255)
                                                                                                                                                                                                      cccGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTGGCAAAAGGGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTCCCAGGAAATGTTCCCGCGGGGAAGACTCCCCACCCAGGGCACGGGGGGCTCCCaaacatcg                                     >  2:96173/1‑232 (MQ=255)
                                                                                                                                                                                                       ccgggtccGGGAACGGTTGCCCACCGTAGATTTGCTGGGGAAATTGGAAGCGAG‑CTGCGC‑GTACGGCCAGGGCACGTTCGTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATcgcg                                    <  2:382648/233‑1 (MQ=255)
                                                                                                                                                                                                        cGGTGCCGGGAAGCGTTGCTCACCGGAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTTCGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATcgcg                                    <  1:1131070/238‑1 (MQ=255)
                                                                                                                                                                                                           tGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCtt                                                                                                                                >  1:811135/1‑143 (MQ=255)
                                                                                                                                                                                                           tGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCtt                                                                                                                                <  2:811135/143‑1 (MQ=255)
                                                                                                                                                                                                           tGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTgg                                >  1:1241967/1‑239 (MQ=255)
                                                                                                                                                                                                                  atgggTTGCGCACCGTAGATTTGCTGGGGTAAGTGGAAGCAGA‑CGGGGC‑GGACGTCCCGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCAc                          <  2:1047254/234‑1 (MQ=255)
                                                                                                                                                                                                                     cGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCt                                                                                                   <  1:874732/162‑1 (MQ=255)
                                                                                                                                                                                                                     cGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCt                                                                                                   >  2:874732/1‑162 (MQ=255)
                                                                                                                                                                                                                     cGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCa                           >  1:1083108/1‑234 (MQ=255)
                                                                                                                                                                                                                     cGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAAGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACCATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTGGCGCAGGGAAGATTCTCCAGCCAGGGCTCGGGGCGCTTCCAGAAACGCCCTGGTAGCACCggc                      >  2:515764/1‑237 (MQ=255)
                                                                                                                                                                                                                       ttGCTCACCGTAGATTTGCTGGAGTAACGGGAAGGTGA‑CGTCGC‑GTGCGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTAGCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGTCg                     <  1:44399/238‑1 (MQ=255)
                                                                                                                                                                                                                        tGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGTCGCt                   <  1:1015022/239‑1 (MQ=255)
                                                                                                                                                                                                                          cTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTAACGCCGGCCAGCAAATGTTCGCGCAGGGAAGTATCGCAAGCCAGGCAACGGGGAGCTTCCAGACTCGCCCTGGGAACACCCTccccc                  >  2:868244/1‑234 (MQ=255)
                                                                                                                                                                                                                               cGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGTCGCTATCcagc            >  1:80247/1‑239 (MQ=255)
                                                                                                                                                                                                                               cGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGCCGCTATCcagc            >  1:262873/1‑239 (MQ=255)
                                                                                                                                                                                                                               cGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGAGCAGCTTAATACGGCGCTGACGCCTGCCAGTAAATGTTCCCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGCCGCtccccccc            >  2:1087805/1‑232 (MQ=255)
                                                                                                                                                                                                                                    aTTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTCCCAGTAAATGTTCCCGCAGGGAAGTATCGCCAGCAGGGGATCGGGGGGCTTCCAGAACCCGCCTGGTAGCCCCGTCCCTATCCAGCAGACg       >  2:939527/1‑239 (MQ=255)
                                                                                                                                                                                                                                     tttGCTGGGGTAATGGGAAGCGGC‑CGGCGC‑GTACTGCCAGGGCACTTTCTCGGAGGTAGCTG‑CTGTTGGAACGGGAAACCTTGTCGCAAAAGGGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGTCGCTATCCAGCAGACg       <  2:1034772/238‑1 (MQ=255)
                                                                                                                                                                                                                                         cTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCCGAATCGCGCTGGTAGCACCGTCGCTATCCAGCAGACGAAAc   >  1:814840/1‑238 (MQ=255)
                                                                                                                                                                                                                                         cTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGGGCTGGTAGAACCGTCGCTATCCAGCAGACGCAACt  >  1:303808/1‑239 (MQ=255)
                                                                                                                                                                                                                                         cTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGTCGCTATCcagacgccgagacc  >  1:533449/1‑228 (MQ=255)
                                                                                                                                                                                                                                         cTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGTCGCTATCCAGCAGACGAAACt  >  1:431752/1‑239 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                             
TGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGCCGCCGCTTTTGAGCAACAATCCTTTGAGGTGATTTTTATCCAGTTCGAGGAACTGGCTGGGGGTCAGTTCATCAGCCATACAAATGGCGGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGA‑CGTCGC‑GTACGTCCAGGGCACGTTCTTGCAGGTAGCTG‑CTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCGCTGACGCCTGCCAGTAAATGTTCGCGCAGGGAAGTATCGCCAGCCAGGGATCGGTGAGCTTCCAGAATCGCGCTGGTAGCACCGTCGCTATCCAGCAGACGAAACT  >  NC_000913/4141238‑4141709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A