Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,549,431 |
G→T |
11.4% |
C208F (TGT→TTT) |
fimH → |
minor component of type 1 fimbriae |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,549,431 | 0 | G | T | 11.4%
| 428.6
/ 3.3
| 144 | C208F (TGT→TTT) | fimH | minor component of type 1 fimbriae |
| Reads supporting (aligned to +/- strand): ref base G (61/63); new base T (18/2); total (79/65) |
| Fisher's exact test for biased strand distribution p-value = 5.26e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 144 total aligned reads displayed.
ACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTATGCACGTACCGGAGGGCAGGTGACTGC > NC_000913/4549199‑4549665
|
aCGCCTTTGGGCTGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAAGTGCCGTGCTTATTTTGCGACCGACCAACAACTATAACAGCGATGATTTCCAGTGTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTGCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGaa < 1:819370/239‑1 (MQ=255)
gccgggtggCAGTGGGGGGGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGaaa < 2:1049577/230‑1 (MQ=255)
cTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTTTTCCCGGGATGTCACCGTTACTCTTCCGGGCTACCCCGGTTCAGTGCCCATTCCTCTTTCCGTTTATTGTGGGAAAAg > 1:522265/1‑238 (MQ=255)
tggtaGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAGGcc < 1:861199/235‑1 (MQ=255)
gtgAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTCCTCTGCCCGACTAACCCGGTTCAGTGCCAATTCCCCTTACCGTTTATTTTTCGGAAACCCa > 1:670733/1‑239 (MQ=255)
gtgAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGGTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCa > 1:492806/1‑239 (MQ=255)
ttggcggTGGGGGGGGGGGGGCGTTTAAAGTTGGCTAATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCaa < 2:702592/233‑1 (MQ=255)
tgAGCAGTGCGGGCGGGGTTGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACCCTGCCGGACTACCCTGGTTTATTGCCCATTCCTCTTTCCGTTTATTTTGCGAAAAGccca > 1:1147045/1‑237 (MQ=255)
aGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCTAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAAcc < 1:745812/238‑1 (MQ=255)
tGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTATGCTCGTGATTTCACCGTTACTCTGCCGGCATACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTTTGCGAAAAGCCaaaaaccgg > 1:737976/1‑234 (MQ=255)
tGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCGTCGCGTTTTTCGCCCGTTGTGTCTCCCCTACTCTCCCGGACAACCCCGCGTCAGCGCCAATTCCTCTTACCGCTTTTTTTGCGAAAAAACAAAAcccag > 2:878211/1‑236 (MQ=255)
gcggggggTGTTGCGATTAAAGCTGGCTCATTAATTGCCGTTGTTATTTTGCGACAGACCAAAAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTg < 2:1147045/237‑1 (MQ=255)
gTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCCTTTTTTTGTCGAAAAGGCCAAACCCGGGGGATTAcc > 1:849502/1‑238 (MQ=255)
gTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGGTACTCTGCCGGACTACCCCGGTTCAATGCCCATTCCCCTTACCGTTTATTGTGCGAAAAGCCAAAAACTGGGGGATTaac > 1:230802/1‑236 (MQ=255)
gTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTAT‑ACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGGCTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTTTGCGAAAAGCCAAAACCTGGGGGATTACct > 1:614781/1‑238 (MQ=255)
aaaGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGCTGTTTTTGCTCTGGATTTCACCGTTCATCTTCCGGGCTCCCCCGGTTTAGTACCAATTTCTCTTACCGTTTTTTTGGGGGAAAACCAAAAACCGGGGGATTAACTCTCCC‑Gccc > 2:367769/1‑237 (MQ=255)
gCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGTCGGCTGCGATGTTTCTGCTCGGGATGTCACCCTTAATCTGCCCGCCTACCCTGGTTCATGGCCAATTCCTCTTACCGTTTATTGTGCGTAAATCCAAAAACTGCGGGATTATCTATCCG‑GCACAACCCCa > 1:1024072/1‑239 (MQ=255)
ttAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTTCTCGTGATGTCACCGTTACTCTTCCGGACTACCCTGGGTCAGGGCCCATTCCTCTTACCCTTTTTTTTGCGAAAAGCCCAAAACTCGGGGATTACCCCTCCGCGCAAAAcccagaaga > 2:369010/1‑232 (MQ=255)
tAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCt < 1:356770/205‑1 (MQ=255)
tAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTAt < 1:1260723/212‑1 (MQ=255)
gTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTTTGCTCTTGATGTCACCGTTACTCTGCCGGGCTACCCTGGTTCAATGCCAAATTCTCTTAACCCTTATTTTGCGGAAAGCCAAAAACTGGGGGATTAACTCTCCG‑GCACaaacaccaaagagggcaaaac > 2:77526/1‑220 (MQ=255)
gCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGCGGTGCCTACTGGCGGCTCCCGTGTTTTTGTTCGTTCTTTCTCCGCTCCCTTCCCGGACTACCCCGGTTCAGTGCCACTTTCACCTACCCTGTTTTGTTCGAAGAACCCAAACACGGGGGATTTCACCTCCC‑GGCCACCCCCAAATGGGGGCacaacca > 2:154882/1‑233 (MQ=255)
tttttttGCGACAGCCCACAAACTATAACAGCGATGATTTCCAGTTTGTGTGGGATATTTACGCAAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtt < 2:903062/236‑1 (MQ=255)
tttttttGCGACAGCCCAACAATATTAAAGGGGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGGGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtt < 2:1162124/236‑1 (MQ=255)
tttttttGCGACAGAGCAAGAACTAGAGCAGGGATGATTTCAATTTTGTGTGGAAGATTTACGCCAGTAATGATGTGGTGGTGCCTGTGGGGGGCTGTGGTGTTTCTGTTCGTGATGTCACCGTTACTCTGCCGGACTACCCGTGTTCAGGGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTCCCTCTCCG‑GCACATCCGCAGATGCGGGCAACTCGAtt < 2:202196/236‑1 (MQ=255)
tttttttGCCACAGCCCAACAAATATTACAGCGATTGTTTCCCGTTTTGGTGGAAGATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGGCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtt < 2:665218/236‑1 (MQ=255)
ttATTTTGCGACAGACCAACAACTATACCAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtt < 1:1044016/239‑1 (MQ=255)
ttATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtt < 1:383968/239‑1 (MQ=255)
ttATTTTGCGACAACCCAACAACTATAATCGCTATGGTTTCGAGTTTGTGTGGAATATTTACGCCAAGAATGATGGGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtt < 2:849502/239‑1 (MQ=255)
tATTTTGCGACAGACCAACAACTATAACGGCGATGATTTCCAGTTTGTGTGGAATATTGACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtt < 1:516030/238‑1 (MQ=255)
acaacTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCCGCGGTGTTTCTGCTCGTGATGTCCCCGTTACTCTTCCGGGCTACCCCGGTTCTGTTGCAATTCCTCTTACCGCTTTTTTTGCGGAAAACCCAAAACTGGGGGATTACCTCTCCC‑GCCCAACCACCGATGCGGGGAACACGCGTTTccacaaaaacccccag > 2:502383/1‑224 (MQ=255)
ttataACAGCGTTGGTTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGGTCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGtttt < 2:793053/238‑1 (MQ=255)
taACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGGATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTTACCAATA‑CCCCGTCGTTTTCa > 1:1150666/1‑238 (MQ=255)
aaCAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCCGGGGGATTACCCCTCCG‑GCCCAACCCCAGATGGGGGCAACTCGATTTTCACCAAAA‑CCCCGCCGTTTTCAc > 2:809810/1‑238 (MQ=255)
gCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCGCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGGATTACCTCTACG‑GCACAACCGCAGATGCGGGCAACCCGATTTTCACCAAAA‑CCGCGTCGTTTTTACCTgac > 1:209801/1‑237 (MQ=255)
cGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGGCTACCCTGGTTCAATGGCCATTCCTCTTACCGGTTATTTGGCGGAAAGCCAAAACCTGGGGGATTACCTCTCCG‑GCACAACCGCCAAAGTGGGGAAATCGATTTTTAACCAAA‑CCACGCGCTTTTCAccctcca > 2:633714/1‑234 (MQ=255)
atgatTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTTTGCGAAAAGCCAAAAACTGGGGTATTACCTCTCCC‑GCACAACCGCAGATGCGGGCCACTCGATTTTCACCCATA‑CCGCGTCGGTTTAACCTCCACAg > 1:400093/1‑239 (MQ=255)
atgatTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTTGGGGATTACCTCTCCG‑GCCCAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGGTTTCACCTGcacct > 1:171215/1‑237 (MQ=255)
atgatTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGGGATGTCACCGTTACTCTGCCGGACTACCCCGGTTCATTGCCCATTTCTCTTACCGTTTATTTTTCGAAAAGCCCAAACCTGGGGGATTACCCCTCCG‑GCCCAACCCCCGATGCGGGCAACCCGATTTTTACCAAAA‑cccccccggttttccctgccaag > 2:908236/1‑218 (MQ=255)
atTTCCAGTTGGTGTTGAATGTTTCCGCCAATAATGATGTGGTGGTGCTTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCCCCGTTACTCTGCCGGACTACCCGGGTTCAGTGCCAATTCCTCTTCCCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtttt < 2:1012302/205‑1 (MQ=255)
tttGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGGATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTTACCACTA‑CCGCGCCGTTTTTCCCTTCCCAGGGGGTCgggg > 1:1250679/1‑236 (MQ=255)
tgtgGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑Ccgcg < 2:172186/206‑1 (MQ=255)
tgtgGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑Ccgcg > 1:172186/1‑206 (MQ=255)
ggggATTATTTGCTCCATTAATGGTGTGGTGGTGCGTACTGGGCGCTGGCATGTTTCTGCTCGTTATGGCACCGTTACTCGGCCGAACTGCCATGGTTCAGGGACAATTCCTCTTGCCGGTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGTCGGCGGCGTACAGt < 2:233543/237‑1 (MQ=255)
atatTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCCATA‑CCGCGTCGTTTTCACCCGCCCAGGGCGTCgggtgaccgtttgcg > 1:815956/1‑226 (MQ=255)
ttttccccAAAAAGGGTGGGGTGGGGCCTACGGGGGGCTGCGATGTTTCTGCTCGTGATGTCCCCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACgcgc < 2:1250679/233‑1 (MQ=255)
tttaagggacgggatgTGGGGGGGCCTACTGGGGGGTGGTATTTTTTTGCTCGTGATGGCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCaa < 2:840444/227‑1 (MQ=255)
ttccccAATAATGGTTTGGTGGGGCCTTCTTGGGGTTGCGATGTTTCTGCCCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCaa < 2:220448/235‑1 (MQ=255)
ttcGCCAAAAATGATGTGGGGGTTCCTACTGGGGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCaa < 2:1150666/237‑1 (MQ=255)
atgTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGAcgcg < 1:898958/223‑1 (MQ=255)
ggtggtgCCTACTGGCGGCTGCGATGTTTCTTCCCGTGATGTCACCGTTAATTCGCCCGACTTACCTGGTTCCTTGCCAATTCCTCTTACCGGTTTTTGTGCGAAAAGCCAAAACCTGGGGGTTTACCTCTCCC‑GCACAACCGCAAATGCGGGAAACCCGATTTTTACCAATACCCCCACCGTTTTC‑CCCGCCCAAGGGGACGGCGGACCGGTTACGCCCAACgggcacgattttccaa > 2:1193742/1‑225 (MQ=255)
ggtggtgCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCCCAGGGCGTCGGCGTCCAGTTGACGCGCACCGGGACGATTATTCCac > 1:1204919/1‑238 (MQ=255)
gtggtgCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtttt < 1:340718/164‑1 (MQ=255)
tgCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGaa < 1:369010/238‑1 (MQ=255)
tACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAaca < 1:950775/239‑1 (MQ=255)
cTGGCGGGTGCGATGTTTCTGCTCTGGATGTCCCCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTTCCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACg < 1:1332068/239‑1 (MQ=255)
cTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCCATTCCTCTTACCGGTTATTTTGCGAAAAGCCAAAACCTGGGGGATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTTACCAATA‑CCGCCTCGTTTTCACCCTCACAGCGCGCGCGCGTACAGTTGGCGCCCAAACGTACGAATATTCCCGAGAAAAAAACg > 2:179589/1‑239 (MQ=255)
ggcgggttgtgttttttttgtCGTTATTTCCCCGTTTATTTTCCGGGCTACCCCGGTTCAGTGCCAATTCCCCTTACCGTTTATTGGGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGt < 2:614781/219‑1 (MQ=255)
cggcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTACACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTa < 1:1117550/238‑1 (MQ=255)
tGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑Gcac > 1:1284960/1‑119 (MQ=255)
tGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑Gcac < 2:1284960/119‑1 (MQ=255)
gCGATGTTTCTGCCCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCCCAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGtt < 1:974555/238‑1 (MQ=255)
tgTGATGTACCCGTTACTCGGCCGGACTACCCTGGTTCAGTGCCAATTCCCCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGa < 1:878211/237‑1 (MQ=255)
tGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCCACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCTGCCTACAGTTGACCCGCAACGGGACGATTATTCAAGCGAATAAACAGGAATCGTTAgagacaggggggaatt > 2:1324200/1‑224 (MQ=255)
gTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTcggc > 2:224852/1‑239 (MQ=255)
cACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTcggcgg < 1:1314252/239‑1 (MQ=255)
cccctttccctGCCCGACTACCCTTGTTCAGTGCCAATTCCTCTTACCGTTTATTGTTCGAAAAGCCAAAACCTGGTGTATGACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTGTCACCAATT‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGt < 2:209801/230‑1 (MQ=255)
cccGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCCCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGt < 1:633714/238‑1 (MQ=255)
aCCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCCCAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGCCGGCGTACCGTTGACGCCCAACGGGACGCTTATTCCAGCGAAAAACCCGGGATCGTTAGGCGCCGGAAGGGCTTcgggggg > 2:1076468/1‑238 (MQ=255)
aCCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGt < 1:1089826/239‑1 (MQ=255)
aCCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCACCGACTAACCCGGAATCGTTAGGAGCAGTAGGGACTTCGACGGt > 1:576837/1‑239 (MQ=255)
ttACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAaca < 1:1130966/201‑1 (MQ=255)
aCTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAACACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCCCAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAAAACGGTATCGTTCGAAGCAGTCGGGCATTcggcggcaaggcg > 1:580087/1‑232 (MQ=255)
aCTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTCCGATTATTCCAGCGAATAACACGGTATCGTTAGGAGAAGTAGGGAATTCGGCGGGGGGTcg > 2:427958/1‑238 (MQ=255)
aCTCTGCCGCACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGCATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGCCGTTTTCACCTGCACAGTGCGTCGGCGTACAGTTGACGCGCAACGGGACGCTTTTTCCAGCGACTACCACGGGACCGTTTGGACCAGAAGGGAcctggggggggggtcg > 2:1331836/1‑224 (MQ=255)
tGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTCAGGTTGGCGGGCACCGGTACGGTTATTCACGCGAATAACCCGGATTGGTTAGGGCCAGAATGGACTTCGCGGGAGAGGCTgggg > 2:403975/1‑238 (MQ=255)
ccGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAACGCCAAAACCTGGGGCATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGGCGTTTTCACCTGCACAGGGCGTCGGCGTCCCGTTTACGCGCAACGGTACGATTATTCCACCCAATACAACGGTATTCTTTGGAGCAGAAGGCAATTCGGCGGAGGGGCTggggta > 2:235501/1‑236 (MQ=255)
ccGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGAACGATTATTCCATCGAATAACACGGTATCGTTAGGAGCAGATGGGGATTCGCCAGGGAGTATgggggt > 2:777858/1‑236 (MQ=255)
gACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGGGGGTCTGGGATTAAc > 1:10751/1‑239 (MQ=255)
ttCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTAt < 1:78938/238‑1 (MQ=255)
gTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCCACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGGGAGTGTGGGCGTAACGGCAAAATATGCaag > 2:514284/1‑237 (MQ=255)
gTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGGGCAGTAGGGATATCGGCGGGGAGGCTGGGagttggtctttataccaactg > 2:727076/1‑219 (MQ=255)
gTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCATTAGGGACTTCGGCGGGGAGTCTGGGATTAACGGCAACTTCTGCCCg > 1:1150139/1‑239 (MQ=255)
gTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTATGCACg > 1:874541/1‑239 (MQ=255)
tGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGCTTATTCCAGCGAAAACCCCGGAATCGTTTGGGGCAGTAGGGACTTCGGGGGGGGGGTTGGGTTTAACGGGaaaatttgacgg > 2:1192220/1‑229 (MQ=255)
tGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGGGAATAACACCGTATCGTTAGGAGCAGTAGGGCCTTCGGCGGTGGGGTGGGGGTTAACGGCaaaaaagtgacgt > 2:629059/1‑229 (MQ=255)
tGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGa < 1:570959/188‑1 (MQ=255)
tGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGt > 1:18031/1‑208 (MQ=255)
tGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCCAATTATGCACGt > 1:924643/1‑239 (MQ=255)
tGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGGGAGTCTGGGATTAAAGGCAAATAATGGACga > 2:657068/1‑238 (MQ=255)
aaTTCCTCTTACCGTTTTTTTGGGCAAAAGCCAAAACCTGGGGTTTTACCCTTCCG‑GCCAAACCGCAGGTGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTATGCACGTACCg < 2:874541/239‑1 (MQ=255)
aaTTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGAtt < 1:213205/85‑1 (MQ=255)
aTTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGGGAGTCTGGGCTTAACGGCAAATTATGCACGTACCgg > 1:883907/1‑239 (MQ=255)
ttACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTAACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGGGCAGACGGGCCTTAGGGGTGGAGTCTGGGGTTAACGGCAAATTATTAACGAACCGGGGGGCAg > 2:1105994/1‑239 (MQ=255)
aCCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGGTTAACGGCAAATTATGCACGTACCGGAGGGCCGGt > 1:69719/1‑239 (MQ=255)
ccGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTATGCACGTACCGGAGGGCAGGTg < 1:224852/239‑1 (MQ=255)
ccGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTATGCACGTACCGGAGGGCAGGTg < 1:511919/239‑1 (MQ=255)
tATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACGGTTGACGCGCAACGGTACGCTTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGCCTTCGGCGGTGAGTCTGGGATTAACGGCCAATTATGACCCAACCGGAGGGCAGGCGATTg > 1:1066729/1‑238 (MQ=255)
tATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGTGGAGTCTGGGGTTAACGGCAAATTATGCACGTACCGGAGGGCAGGGGAcctc > 2:368660/1‑236 (MQ=255)
tATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGGGGGTCTGGGATTACAGGCAAATAAAGCAGGGACCGGGGGGCAAGGGACGGc > 2:80508/1‑239 (MQ=255)
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ACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCG‑GCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATA‑CCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTATGCACGTACCGGAGGGCAGGTGACTGC > NC_000913/4549199‑4549665
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
