Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F27 I0 R1
|
120 |
139.6 |
2835800 |
98.5% |
2793263 |
226.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
599,612 |
T→G |
19.3% |
V300G (GTG→GGG) |
cusA → |
copper/silver efflux system, membrane component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 599,612 | 0 | T | G | 19.3%
| 252.7
/ 6.9
| 108 | V300G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (17/65); new base G (22/3); total (40/68) |
| Fisher's exact test for biased strand distribution p-value = 1.59e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 108 total aligned reads displayed.
ACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTAT > NC_000913/599382‑599840
|
aCTGGCGGAAGGGGAATATATGGTGCGCGCAAGCGGCTATTTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATcgccg < 2:127052/239‑1 (MQ=255)
ggaagcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTGCTGCGATCCCGC‑AAAAACGCCCGCGAAGGGATCGccgccgggg > 1:473719/1‑236 (MQ=255)
gtgcggcgcCAGCGTCTATCTGCAAACGCTCGACGACTTTAATCACATCTTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGaaa < 2:911083/234‑1 (MQ=255)
tGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTCCGGCCCGGC‑AAAAAAGCCCGAGAAGGGGTGGccgccggggcgggccaaatgggaaa > 2:1184667/1‑219 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCTCGCAACCCGC‑AAAAAAGCCCGAGGAGTGGTGCCCCGCGCGGAGGGCAA‑ACCGGaaaag > 2:1127663/1‑236 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATTCTGCGATCCGGC‑AAAAAAGCCCGGGAAGAGGTCGGCGCCGTGAAGTACAA‑ACTTGGAACGc > 1:687321/1‑239 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTTGGCTCCCGC‑AAAAACGCCCCGGAAGGGGACGCCCCCCTGAAGGACaa‑aacgggaac > 1:838041/1‑229 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGTGATCCGGC‑AAAAACGCCCGAGAAGGGATCGCCGCCGTGGAGGACAAGACTGGaacgc > 1:663687/1‑236 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCGCGGGCCGGC‑AAAAACGCCCGGGAGGGGGGCGCCGCCGGGACGGGCAA‑ACTGGGAAcc > 2:360443/1‑237 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGAGTCTGTGCTCCCGG‑ACAAAAGCCCGCGAAATGATCCGCGCCGGGAGGAGCAA‑AATGGgaaacc > 1:1118039/1‑236 (MQ=255)
gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGGGAGCCGGC‑AAAAAACGCCGGGACGGGATCGCCGCCCGGGAGGGCAA‑ACTGGGAAAGccg > 1:1046570/1‑237 (MQ=255)
cgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCGGTCCGGC‑AAAAACGCCCGGGAAGTGATCGCCGCCGCGGAGGGCAA‑ACCGGAAAAGCGGa > 1:195908/1‑239 (MQ=255)
gcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCGAGCCCGC‑AAAAACGCCCGCGGAGGGATCGCCGCCGGGGAGGGCAA‑AATGGAAACGcatac > 1:73479/1‑235 (MQ=255)
gcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGGCCCGCGGTCCGGC‑CAAAACCCCCGAGCAGGGATCGCCGCCGGGCAGGGCAA‑ACTGGAAACGCGGaa > 1:1313063/1‑239 (MQ=255)
ggCTATCTGCAAACGCGTGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAAGGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAagta < 2:419658/238‑1 (MQ=255)
gCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAGGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCgg < 2:929295/239‑1 (MQ=255)
gCAAACCCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAAGGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCgg < 2:750872/239‑1 (MQ=255)
aaaCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCGCGGTCCGGC‑AAAAAAGCCCGAGGAGGGATCGCCGCCGTGAAGGGCAA‑AATGGGAAAGGCGGAAAGGAGTCCT‑CCggga > 2:1188970/1‑237 (MQ=255)
aaaCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCC‑GGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGaa < 2:701758/238‑1 (MQ=255)
gCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCg < 2:961303/239‑1 (MQ=255)
gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGga < 1:1084165/239‑1 (MQ=255)
gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGga < 1:1298504/239‑1 (MQ=255)
gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGga < 2:1115707/239‑1 (MQ=255)
cggcTTTAATCACATCGTTTTAAAAGCCAGGGAAAATGGCGTGCCCGTTTAACTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGGGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGgag < 1:574702/235‑1 (MQ=255)
cgacTTTAATCATATTGTGTTAAAAGCCAGTGAAAATGCCGTGCCCGTTTATGTGCGCGATGTGGCGAGGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGgag < 2:1007166/238‑1 (MQ=255)
cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGgag < 2:291970/238‑1 (MQ=255)
tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGt < 1:876211/239‑1 (MQ=255)
tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGt < 1:21228/239‑1 (MQ=255)
tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGAGGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTACGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGt < 2:1063911/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCATGGAAAATGGCGTGCCCGTTTAGCTGCGGGATGGTGCGAAGGTCCGGATGGCCCCGGAGATGCGACGGGGAATTGGCGAAGTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGA‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTa < 2:594704/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGGCCTGGGGTCCGGCAAAAAACACCCG‑GGAGGGATCGCCGCCGTGAAGGACGA‑ACTGGAAAAACTGAAAAGTAATATG‑CCGGGAGGCGTGGGGGTAGTTa > 2:299873/1‑239 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCTGCCGTCCGGC‑GAAAAAGCCCCGGAAGGGGTGGCCGCCGTGAAGGGGAA‑AATGGGAACGCTGAAAAGTAGTCCG‑CCCGGAGGCGGGGGGACAGtt > 2:401938/1‑238 (MQ=255)
aTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGGGGTTCTGCGATCCGGC‑CAAAAAGCCCGCGAAGGGATCGCCCCCGCGAAGGGCAA‑ACAGGAAACGCTGAAAAGTAGTCTG‑CCGGAGGGGGTGGGGagagagaaa > 2:21228/1‑234 (MQ=255)
aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCGGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATa < 1:191882/239‑1 (MQ=255)
aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTCCTGCGATCCGGG‑AAAAACACCCGGGAAGGGATTGCCGCCGGGAAGGGCAA‑ACCGGAAAAGCCGAAAAAGAGACTG‑CCCGGAGGCGGGGGGATAATTagacaata > 2:1222638/1‑232 (MQ=255)
aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGAGGGGGGGGGATCCTGCGTTCCGGC‑AAAAACGACCGCGAAGGGAGCGCCGCCGGGAAGGGCAA‑ACAGGAAACGCCGACAAGGAGGCCG‑TCGGCAGGCGTGGAGAGAGTTTCAACATa > 2:1131841/1‑239 (MQ=255)
aaGCCAGTGCAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCCGGCCGTG‑AAAAACGCCCGCGGAGGGGGCGCGGGCGCGTAAGAGAA‑ACTGGAAAAGCGCAAAAGGAGTGTGTCGGGACAGGGTGG‑GAGAGTTAACACACACGATCGcac > 2:614207/1‑237 (MQ=255)
atcaggTGAAAATGGCGTGCCCGTTTATCGGCGCGATGTGGCGAAGGTCCAGATTGGCCCGAAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGAGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcc < 2:790162/234‑1 (MQ=255)
aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcc < 2:638554/239‑1 (MQ=255)
aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcc < 1:1091950/239‑1 (MQ=255)
aGCCAGTGAAAAGGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATGTGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcc < 2:1270641/239‑1 (MQ=255)
gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACcgcg < 2:519297/238‑1 (MQ=255)
gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGAGGCGCGGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTAGTCCTGGGCACCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCgcgc < 2:166900/239‑1 (MQ=255)
ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGGTCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc > 1:81399/1‑238 (MQ=255)
cTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCt < 1:633620/239‑1 (MQ=255)
cgcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGGAGGCGTGGGGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCa > 1:337312/1‑238 (MQ=255)
tGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAc < 1:564137/214‑1 (MQ=255)
ttGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCaa < 2:1314033/238‑1 (MQ=255)
tGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGt < 2:495920/239‑1 (MQ=255)
aaGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGc < 1:1140897/238‑1 (MQ=255)
gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTacaa < 1:1030440/178‑1 (MQ=255)
gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCGGC‑AAAAAAACCCGAGAAGGGGTCGCCGCCGGGGAGGGCAA‑ACTGGAAAAGCTGAAAAGAAGTCTG‑CCGGGAGGCGTGGGGATAGTTACAAAATAAGAACGCAGCCCGCTCATTGAACGCGCCCTCGACCACCCCACCGGGAAGATGCTggg > 2:1354606/1‑238 (MQ=255)
tCCGGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 2:909261/238‑1 (MQ=255)
cccAGATTGGCCCGGAGAGGCGCCGGGGAATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 2:865359/237‑1 (MQ=255)
ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGaa < 2:369690/238‑1 (MQ=255)
ccAGATGGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGaa < 1:871126/238‑1 (MQ=255)
atgggCCCGGAGATGCGGCGGGGCATTGCCGAACTAAACGGCAAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGt < 1:116455/223‑1 (MQ=255)
gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGGTCCCGC‑AAAAAAGCCCGGGAAGGGATCGCCCCCGTGAAGGACAA‑ACTGGAAACGCTCGAAAATAGTCTG‑CCGGCAGGCGCGGGGATAGTTACAACACACGATCg > 2:1030440/1‑178 (MQ=255)
gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTTACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTAtt > 1:230528/1‑239 (MQ=255)
cccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATAAGAACGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtg > 1:1222442/1‑239 (MQ=255)
gggatggggaggggCCTTGCGGAACAAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGCTCCGGCGCTCCGGC‑AAAAACGCCCGAGAAGTGTGCGCCGACGTAAAGGAGAA‑ACTTGAAACGCTAAAAACTAGTCTG‑CCGGAAGGCGTGGAGATAGTTAAAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTGGCTGGAAGAGTTTATtgttg < 2:209992/228‑3 (MQ=255)
agaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGTCCGGC‑CAAAACGCCCGCGGAGGGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGCAGGCGGGGAGATAATTACAACAAAAGAACGCAGCCCGCTCCTTGAACGCGCCACCGACAACCCCCGCCGCAACGTGCCGGGAGAAtttttttgtggg > 2:323099/1‑233 (MQ=255)
agaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCCGC‑AAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACCA‑ACTGGAAACGCGTAAAAGTAGTCTG‑CCCGAAGGCGGGGGGGTAGTTACAACATACGATCGCAGACAGCCCATTGACCACCCCATCGCCCACCCCCCCGGGCAGGTGGTGGAAGAGGTTTTTgtgggg > 2:151597/1‑237 (MQ=255)
gcgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGGGTGGGGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGGTGCTGGGAGGGTTTATTGTGGTGgggg > 1:198247/1‑239 (MQ=255)
cgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGGGGAGGACAA‑ACTGGGAACGCCGAAAAAGAGTCTG‑CCGGGAGGCGGGGGGATAGTTTAAACATAACAACGCAGCCAGCCCCTTTGCCCCCCCATCGGCAACCCCAGCGGCAAGTTGCTGGGAGAGGTTATTGtggtggtggg > 2:1035700/1‑238 (MQ=255)
aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCtgtg < 1:856853/238‑1 (MQ=255)
tGCCGAACTAAACGGCGAGGGCGGAGGGGCGGGGGGGGTGGTGATCCTGCGGTCCGGC‑AAACACGCCCGTGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTgcgc < 2:1242399/239‑1 (MQ=255)
cGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTg < 1:299873/238‑1 (MQ=255)
cGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTg < 2:1222442/238‑1 (MQ=255)
aaCTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTa > 1:376295/1‑138 (MQ=255)
aaCTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTa < 2:376295/138‑1 (MQ=255)
tAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCtgtg < 1:1286588/228‑1 (MQ=255)
ggcgaaggcgaaGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCa < 1:151597/239‑1 (MQ=255)
ggcgggcgGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGgcg < 1:997739/238‑1 (MQ=255)
gcgggGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCtggt < 2:1046570/238‑1 (MQ=255)
cTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGtt > 2:624977/1‑239 (MQ=255)
gCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 1:671787/159‑1 (MQ=255)
gCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa > 2:671787/1‑159 (MQ=255)
gCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGgcg < 1:738747/217‑1 (MQ=255)
gCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGgcg > 2:738747/1‑217 (MQ=255)
gCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTg > 2:1216351/1‑238 (MQ=255)
gATCCGGC‑AAAAGCGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCg < 1:360443/239‑1 (MQ=255)
gATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGt < 2:1213763/234‑1 (MQ=255)
gATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGt > 1:1213763/1‑234 (MQ=255)
aTCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGcc > 1:840349/1‑237 (MQ=255)
aTCCGGC‑AAAAACGCCCGAGAAGTGACCGCGGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCg < 2:1401767/238‑1 (MQ=255)
tCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCg < 2:840349/237‑1 (MQ=255)
tCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGc < 1:94587/238‑1 (MQ=255)
accGGA‑AAAAACCCCCGAGAATTGATCGCCGCCGTGAAGGACAA‑ACTGTAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGc < 2:8815/237‑1 (MQ=255)
ccGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTg < 1:803873/239‑1 (MQ=255)
ccGAC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTg < 1:1291250/239‑1 (MQ=255)
gC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAagtagt < 2:299161/62‑1 (MQ=255)
gC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAagtagt > 1:299161/1‑62 (MQ=255)
c‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTgggg < 2:473719/238‑1 (MQ=255)
c‑AAAAACGCCCGAGAAGTAATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTgggg < 2:1250211/238‑1 (MQ=255)
c‑AAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTgggg < 1:263354/238‑1 (MQ=255)
aaaaaCGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGtt < 2:838041/239‑1 (MQ=255)
ccGCCCAAGAAGGAATGGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCTGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTTGAAGAGGGTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTgtgt < 2:266464/238‑1 (MQ=255)
cGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTa < 1:1216351/239‑1 (MQ=255)
gCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTAt < 1:1188970/239‑1 (MQ=255)
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ACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAA‑ACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTAT > NC_000913/599382‑599840
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
