Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F27 I0 R1 120 139.6 2835800 98.5% 2793263 226.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,151,314 G→C 10.8% A595G (GCG→GGG)  ppc ← phosphoenolpyruvate carboxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,151,3140GC10.8% 158.1 / 2.2 77A595G (GCG→GGG) ppcphosphoenolpyruvate carboxylase
Reads supporting (aligned to +/- strand):  ref base G (50/17);  new base C (2/7);  total (52/25)
Fisher's exact test for biased strand distribution p-value = 3.50e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTCACGTACGTAGCCGCGGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGAC  >  NC_000913/4151076‑4151549
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                            
ttCACGTACGTAGCCGCGGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAgcg                                                                                                                                                                                                                                              <  2:1361254/239‑1 (MQ=255)
    cgtgcggaGCCGCGGTAGACATCGCAGGAGATGTCTGACAGTTCAGCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGGCGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGGCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGGGGTTGT‑GACAGCAGcgccgc                                                                                                                                                                                                                                          <  2:263280/239‑1 (MQ=255)
    cgtacgtaGCCGCGGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGcgccgc                                                                                                                                                                                                                                          <  1:1369784/239‑1 (MQ=255)
         gtaGCCGCGGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAg                                                                                                                                                                                                                                    <  2:213022/239‑1 (MQ=255)
           aGCCGCGGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGc                                                                                                                                                                                                                                   <  2:320606/238‑1 (MQ=255)
                 ggTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCACTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑CTGAGGAGGtct                                                                                                                                                                                                                             >  1:126694/1‑236 (MQ=255)
                  gTAGACATCGCAGGAGATGACCGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTAAGCGCAGGCCGCCTTTCAGGCTTCCTGGCGCGTGT‑GACAGCAGCGCCGC‑ATgcaaagggtcg                                                                                                                                                                                                                            >  1:338662/1‑228 (MQ=255)
                     gACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTTG‑GACCACAGCGCCCC‑CTGCGCAGGGGggccg                                                                                                                                                                                                                         >  2:1303247/1‑238 (MQ=255)
                      aCATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGCGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCTCCTTTCAGGCTTCCTGGCGGTTTT‑GAAAGGACCGCCGC‑ATGAGCAGGGGggccgc                                                                                                                                                                                                                        >  1:1340019/1‑238 (MQ=255)
                       cATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGcgccgccg                                                                                                                                                                                                                      <  1:946423/239‑1 (MQ=255)
                       cATCGCAGGAGATGACTGACAGTTCATCAATAATGCGAGGCCAGCTCTCTGTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTGAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCGTTCAGGCTGCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGcgccgcc                                                                                                                                                                                                                       <  2:58767/238‑1 (MQ=255)
                         tCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATCTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCcgcg                                                                                                                                                                                                                    <  1:371563/239‑1 (MQ=255)
                          cGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGGGCGCCGCcgcg                                                                                                                                                                                                                    >  1:101826/1‑238 (MQ=255)
                          cGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAG‑‑CTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ACGAGCCGGGGCGCCGCcgcgga                                                                                                                                                                                                                  >  1:1054388/1‑236 (MQ=255)
                               gagaTGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATAATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCACCCCCGC‑CTGAGCCGTGGCGCCGCCGGGACCAAt                                                                                                                                                                                                              >  1:202000/1‑239 (MQ=255)
                                 gaTGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGc                                                                                                                                                                                                                                   <  1:134157/216‑1 (MQ=255)
                                         acAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTTG‑TACAGCAACGCCGC‑CTGAGCAGGTGCGCCGCAGCCGACAAAGGAAccgcc                                                                                                                                                                                                     >  2:1228706/1‑238 (MQ=255)
                                           aGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGGTTT‑TGCAGCAGCGCCGC‑CTGGGCAGGTGcgccgccccttccctttacacatctga                                                                                                                                                                                                   >  2:134157/1‑218 (MQ=255)
                                             ttCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAAGCCGCCTTTCAGGCTTCCTGGCGGCTGC‑TACAACACCGCCGC‑ACGAGAAGATGCGTCCCCCCCACCACTAGAACcgccgccg                                                                                                                                                                                                 >  2:786143/1‑236 (MQ=255)
                                               cATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTTT‑GACAGCAGCGCCGC‑ATGAGCCAGGGCGCCGCCGCGACCAATGGAACCGCCGCGcccc                                                                                                                                                                                              >  1:1237757/1‑238 (MQ=255)
                                                     tAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGACTTTCAGGCTTCCTGGCGGGTGT‑GACAGCCGGGGCGG‑ATGAGCCGGTGGGCCGCCGCCGACAAAGGAACCGCCGCGAGCGGGGaaa                                                                                                                                                                                        >  2:113904/1‑238 (MQ=255)
                                                        tGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGGGGaacaac                                                                                                                                                                                     >  1:1171719/1‑239 (MQ=255)
                                                            aCGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGc                                                                                                                                                                                                                                   >  1:376833/1‑189 (MQ=255)
                                                            aCGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGc                                                                                                                                                                                                                                   <  2:376833/189‑1 (MQ=255)
                                                            aCGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCACCGCCGC‑ATGCGCAGGTGCGCCGCCGCGACCACTGGACACGCCGCGGCCGCGGCAACACGTCa                                                                                                                                                                                 >  2:29693/1‑239 (MQ=255)
                                                            aCGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGCTGT‑GACAGCACCGCCCC‑CAGAGCAGGTTGCCCGCCCCGACCAAAGGAAacgcccggcccctgggcaaacacc                                                                                                                                                                                  >  2:624391/1‑219 (MQ=255)
                                                             cGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GGCAGCAACGCCGG‑CTGAGCAGGGGCGCCGCCCCGACCAAAGGGACcgccgccgcccgggcaccacggca                                                                                                                                                                                 >  2:66793/1‑220 (MQ=255)
                                                                        tttCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGG‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAAACGCCCCCACCCGGGAACAACGTCCGCCCAAAAccc                                                                                                                                                                      >  2:1378109/1‑238 (MQ=255)
                                                                                       gggcggtgggTTGGCGTCCAGAGTCCCCCCGTTATAAAGGGGCGGTCTGCGGACGTGTTTTTCTG‑GCAGACCATTTTTAATGGGGATCACCTCGCCCTGGTCGGTTACGCGCGGGCCGCCTTTCAGGTTTCCTGGGGGTTGT‑GACAGCGGCGCCGC‑ATGAGCAGGTGCCCCGCCGCGCCCATTGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGtt                                                                                                                                                       <  2:596800/230‑1 (MQ=255)
                                                                                               tgTTGGCTCCCAGAGCCGCCCGGCTAAAAAGCGACGGGGTGGGGTGGGTGTTTTCTG‑GCAGCCCCTATTAAAAGCTGATCATCTCGCCCTGTGCGGTTGCGCGCAGCCCCCCTTCCAGGCTTCCTGGCGGTGGC‑GACCGCAGCGCCGC‑AGGAGCGGGGGCGCCGCCGCGACCAAGGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAAt                                                                                                                                              <  2:889630/238‑1 (MQ=255)
                                                                                                     ctccgaaaccccccccGGTATAAAGCAACAGGCTGCTGGCGGTGATTTCGG‑GAAGCCAATTTTAAAAGGGGATCTTCTCCCCTTGTTGGTTTACGCGGGGCCCGCTTTTCGGTCTTCCGGGGGTTTGT‑GACAGCGGCGCCGC‑ATGGGCGGGTGCCCCCCCGCGCCAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGa                                                                                                                                                   <  2:1411381/216‑1 (MQ=255)
                                                                                                        ccAGAAGCCCCCCGTTATAAAGCGATAGGCGGGTGAGGGTGTTTTCGG‑GCGGCCCTTATTTAAAGCGCTTCATCCCGCCTTGTTCGGTTCCGCGCAGGCCGCCTTTCAGGCTTCGGGGGGGTTGT‑GACAGCAGCGCCCC‑ATGGGCAGGGGCGCCGCCGCCACCAATGAAGCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCtgt                                                                                                                                     <  2:1051564/239‑1 (MQ=255)
                                                                                                         cAGAATCGCCCCGGTATAAACCGACAGGCTGCTGACGGTGATTTCGG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTAACACGCAGGCCTCCTTTCAGGCTTCCTGGCGGTTGG‑GGCCGCAAACCCGC‑GTGCGCAGGTCCGACGCCGCCGACACTGGGAACGCCGCGAACGGGGCAAACCGGCAGCGCCAGACACGCTTTTTCTCAggggtcggttcgtggcctctgag                                                                                                                                    >  2:973538/1‑218 (MQ=255)
                                                                                                          aGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCCGCGCCGC‑CTGGGCAGGGGCGCCGCCCCGACCAAAGGAACCGCCGCGGCCCTGGGACAACGCCAGCTCACTACCCCCCTTTTCCCAGGGTTTGTTTAATTCCTCCtgtg                                                                                                                                    >  2:72028/1‑238 (MQ=255)
                                                                                                               cGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGGGCCGC‑CTGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGGCCGGGGAACAACGGCCGCCCAAAACCCACTTTTTCGCCGGTTTTGATTAATGCaatccttgccctta                                                                                                                              >  1:1411381/1‑226 (MQ=255)
                                                                                                                           aaggcacgggcggcTGA‑GGTTATTTCGGTGCAGAACTTATTCAAAGCGCCCCATCCCGCCTTTGCCGATTCCGCGCGCGCCGCCTTTCGGGTTGCCGGGCGGTAGT‑GCGAGCAGCCCCGT‑ATGGGCGGGTGCCCGCCCGCACCCAATGAACCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAgg                                                                                                                  <  2:938457/231‑1 (MQ=255)
                                                                                                                                aCAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTCATATTGCGCCCCggca                                                                                                                >  1:1394129/1‑234 (MQ=255)
                                                                                                                                 cgggCTGCGGGCGTTGTTTTCGG‑GCAGCCTTTTTTTAAGGGGTACCCTCGCCCCCTTTTGGTTTCCGCCCAGCCCGCCTTCCGGGCTTCCTGGGGTTTGT‑GACAGCGGCGCCGC‑ATGAGCGGGTCCGCCCCCGCGACAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt                                                                                                             <  2:1126347/236‑1 (MQ=255)
                                                                                                                                 cAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTTT‑GACAGCAGCGCCGC‑ATGAGCAGGGGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt                                                                                                             >  1:1334210/1‑238 (MQ=255)
                                                                                                                                 cAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt                                                                                                             >  1:194610/1‑238 (MQ=255)
                                                                                                                                 cAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAAACGCCGCGCACGTGGAACAACGGCAGCTCAATACCCGCTTTTTCCCAAGTTTTGATTAATACATCCTGTGCCCTGTATTTCGCCCAGGAAGCt                                                                                                             >  2:1207071/1‑238 (MQ=255)
                                                                                                                                      tgctgACGGTGGTTTCTG‑GCAGACCATATTTAAAGCGTATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCCACCAATGGAACCGCCGCGCCCCTGGAACAACGTCAGCCCCATACCCCCCTTTTCGCAGGTTTTCATTAATGCATCCTGGGCCTGGTATTTCTGCCAGGAAGCGTCCAt                                                                                                        >  2:1160170/1‑238 (MQ=255)
                                                                                                                                        ctgACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATc                                                                                                       >  1:1199554/1‑237 (MQ=255)
                                                                                                                                               ttttttCTG‑GCCGACAATTTTCAAAGCGGCTCCCCCCGCCCTGTTGGTTTGCGCGCGCGCCCCTTTTCGGTCTTCGTGGGGGTTGT‑GCCACCGCCCCCAC‑TGGAGGAGGGCCCCCCCCCCGACAAAGGTAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGc                                                                                               <  2:1334210/235‑1 (MQ=255)
                                                                                                                                               tgttttCTG‑GCATACCATATTAAAAGCGTCCCCCCCCGCCCTGTTCGTTTCCGCGCGGGCCCCCTTTCAGCCTGCCTGGCGGTTGT‑GACAGCAGCGCCGC‑AGGAGCGGGGGCGCCGCCGCGACCAATGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGc                                                                                               <  2:194610/235‑1 (MQ=255)
                                                                                                                                                  tttCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCCCCGCGACCGTGGGACAACGTCACCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCACGAAGCTGCCATCACTCCCGCATCt                                                                                           >  2:1287046/1‑239 (MQ=255)
                                                                                                                                                       g‑gCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCtttt                                                                                        >  1:198583/1‑237 (MQ=255)
                                                                                                                                                         caccacttctttaaaaGCGGATACTCCCGCCCGGTTGGTTGCCGCGACGGCGCCCTTGCGGGCTTCCGGGCGTGTGT‑GACAGCGGC‑CCGCAAAGGGCGGTTGCGCCGCCCCAACCAGCGATACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGc                                                                                      <  2:1112694/225‑1 (MQ=255)
                                                                                                                                                          cAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATg                                                                                                                                             >  1:1030215/1‑182 (MQ=255)
                                                                                                                                                            gACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGTCGGTTGT‑GACAGCAGCGCCGC‑CTGAGCAGGGGCGCCGCCGCGACCAATGGAACCGCCGCGCCCGTGGAACAACGTCCGCTCAATACCCGCTTTTTCGCATGTTTTGCTTAATCCCTCCTGCTCCTGATATTTCGTCCAGGGCACTTCCATCACTCCCGCATCTTTTTCTCAg                                                                                  >  2:327242/1‑239 (MQ=255)
                                                                                                                                                                            gATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGGGCCGCCGCGACCAATGGAACCGCCGCGGCCGTGGGACAACGTCAGCCCAATACCCGCTTTTTCGCAGGGATTGATTAATGCATCCTGTGCCTGATATTGCGACCAGGAAGCTGCAATCACTCCCCCATCTTTTGTCGGGTACGAATCGGCAatca                                                                  >  2:325215/1‑239 (MQ=255)
                                                                                                                                                                            gATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGGACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTACCGCATCTTTTGCTGAGTCGGAATAGCCAatca                                                                  >  2:120491/1‑239 (MQ=255)
                                                                                                                                                                             atcatcTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGGAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCCGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatca                                                                  >  1:380892/1‑238 (MQ=255)
                                                                                                                                                                             atcatcTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCCGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCCGGAAGCTGCCATCACCCCCGCCTCTTTTGCTGCTGCGGAATACCCAatca                                                                  >  2:1039839/1‑238 (MQ=255)
                                                                                                                                                                             atcatcTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatca                                                                  >  1:786479/1‑238 (MQ=255)
                                                                                                                                                                             atcatcTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatca                                                                  >  1:784876/1‑238 (MQ=255)
                                                                                                                                                                                     gCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCGGCCATCACTCCCGCCTCTTTTGGTGAGTCGGGATAGCCAATCATCACCa                                                            >  2:398153/1‑236 (MQ=255)
                                                                                                                                                                                        cTGTTCGGTTACGCGCACGCCGCCTTTCGGGCTTCCGGGGGGTGGT‑AAGAGCGGCGCCGA‑AGGGGGAGGTGCGCCGCCGCGACAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGtt                                                      <  1:261934/239‑1 (MQ=255)
                                                                                                                                                                                         tgtgcggtacgccgcAGGCCGCTTTGCCGCCTCCCTGGCGTTTGT‑GCCGCCGGCCCGCC‑ATGGGCGGGGCCGCCCCCGCGACAAATGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGtt                                                      <  2:1301974/226‑1 (MQ=255)
                                                                                                                                                                                          gTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGGGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGttt                                                     >  2:394447/1‑238 (MQ=255)
                                                                                                                                                                                           ttCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTg                                                    >  2:253957/1‑238 (MQ=255)
                                                                                                                                                                                           ttCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTg                                                    >  2:1293107/1‑238 (MQ=255)
                                                                                                                                                                                                ttACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGATGAGTCGGAATAGCCCATCATCCCCATCTGTTTGCCCTgc                                              >  1:1014027/1‑238 (MQ=255)
                                                                                                                                                                                                   cgcgCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGGGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTCCTGAGTCGGAAAAGCCAATCATCACCATCTGTTTGCCCTGCATc                                           >  2:60029/1‑239 (MQ=255)
                                                                                                                                                                                                    cccgcggCCGCCTCCCAGGCGTCGGGGCGGTTGC‑CACAGCGCCGCCGA‑GTGAGCGGGCGCGCCGCCGCACCAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCa                                          <  2:1054388/234‑1 (MQ=255)
                                                                                                                                                                                                     cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCCGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGGTTGCCCTGAATCAg                                         >  2:705671/1‑239 (MQ=255)
                                                                                                                                                                                                     cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTTCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAAACAg                                         >  2:1271521/1‑239 (MQ=255)
                                                                                                                                                                                                     cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGcc                                                  >  1:977951/1‑230 (MQ=255)
                                                                                                                                                                                                     cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGCGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCCGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGACATCACTCCCGCCTCTTTTGCTGAGTCGGAATATGCCATAATCACCATATGTTTGCCCTGAAtacg                                         >  2:749779/1‑236 (MQ=255)
                                                                                                                                                                                                     cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGG‑GACAGCAGCGCCGC‑ATGAGCATGGGCGCCGCCGCGAACAATGGAACCGACGCGACCCTGGAACAACGTCAGCTCAATAACCGCTTTTTCGAAGGTTTTGATTAATGCAACCTGTGCCTGATATTGCGCCCAGGAAGATGCCATCACTCCCCCCTGTTTTGCTGCGTGAGGATAGCCAAACATCACCATCTGTTTGCCCTGAATCAg                                         >  2:274557/1‑239 (MQ=255)
                                                                                                                                                                                                        gggCCCCTTTCCAGCCCTCCGGGCGTTTGG‑GACGGCAGCCCCGC‑GAGAGCGGGTGCCCCGCCGCGCCCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGc                                       <  1:749779/237‑1 (MQ=255)
                                                                                                                                                                                                          gccgccTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCAc                                    >  1:1075699/1‑239 (MQ=255)
                                                                                                                                                                                                              ccTTTCAGGCTCCCGGGCGTTTGA‑GACCGGCGCCCCGC‑GTGAGCAGGTGCCCCGCCGAGACCAATGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATa                                <  1:673273/239‑1 (MQ=255)
                                                                                                                                                                                                                ttccAGGCTCCCTGGCGGTTGT‑AACGGCGGCGCCCC‑ATGGGAGGGGCCGCCGCCGCGCCCAAGGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATAcc                              <  1:60029/236‑1 (MQ=255)
                                                                                                                                                                                                                   ccggCTTCTGGGGGTTTGT‑GACAGCACCCCCGA‑AGGGGCGGGCGCCCCGCCGCGCAAAAGGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGt                           <  1:786143/237‑1 (MQ=255)
                                                                                                                                                                                                                    aGGCTCCCTGG‑GGTTGTGGACAGCGCCCCCGC‑AGGGGCGGGTCCCCCGCCCAGCACATGGAAACCGCCGCGACCGTGGAACAGCGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGt                           <  1:113904/238‑1 (MQ=255)
                                                                                                                                                                                                                         tCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCCGTCAatat                     >  1:368268/1‑239 (MQ=255)
                                                                                                                                                                                                                         tCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCA‑CTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATAtt                    >  1:1171110/1‑239 (MQ=255)
                                                                                                                                                                                                                                  ttGT‑GACAGCCGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACCTCAGCTCAATACCCGCTTTTTTGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTTGGCCCAGGAAGCGGCCATCACTCCCGCATCTTTTGCTGAGTCGGACTAGCCAATCATCACCATCTGTTTGCCCTTAATCAGGCCACGATACCAGGCAATATTGcgca               >  2:446570/1‑236 (MQ=255)
                                                                                                                                                                                                                                     ggaaCAGCGGCGCCAC‑ATGGGCGGGGGCCCCGCCGCGACCAATGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTgg          <  1:1378109/236‑1 (MQ=255)
                                                                                                                                                                                                                                             accgccgc‑AGGGCCGGGGGCCCCGCGGCGACAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCAt     <  1:1243984/234‑1 (MQ=255)
                                                                                                                                                                                                                                              gcgcCGC‑ATGAGGGGGTGCGCCGCCGCCACAAAGGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGAc  <  1:398153/238‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                            
TTCACGTACGTAGCCGCGGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGAC  >  NC_000913/4151076‑4151549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A