Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F9 I0 R1 71 67.1 1514203 90.7% 1373382 220.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,079,975 A→G 18.6% L206P (CTC→CCC)  yeeA ← putative transporter, FUSC family inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,079,9750AG18.6% 156.4 / 3.4 79L206P (CTC→CCC) yeeAputative transporter, FUSC family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (29/31);  new base G (13/4);  total (43/36)
Fisher's exact test for biased strand distribution p-value = 5.41e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTCAGCAGTATTTGCTGCATCATGTGCTGGGTATCAC‑GAAGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCAATTTCACCTGTCGGGGA  >  NC_000913/2079750‑2080195
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                               
cTCAGCAGTATTTGATGCATCATTGGCTGGGTTTCAC‑GAAGGTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGt                                                                                                                                                                                                                               <  1:281824/228‑1 (MQ=255)
   agcagTATTTGCTGCATCATGTGCTGGGTATCAC‑GAAGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGGCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGGGCA‑ATCAGT‑CCACGCATTTTCCTGGGATCGGTCAGGGGgtttt                                                                                                                                                                                                                           >  1:210633/1‑229 (MQ=255)
            tgctgaATCATGTGCTGGGTATCAC‑GAAGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATGCCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATgg                                                                                                                                                                                                                   <  1:89163/228‑1 (MQ=255)
                ctcgcatGTTCTGGGTCTCCCGGAGGTTTTTGC‑CGTTTCATGACCCGAAATGGCTGGGGCGCGTGGCCCAGTATTCGTTGATTTGCACATCCAGCAGACAAACCAGATTTCGGTTAATTGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTc                                                                                                                                                                                                              <  2:756525/225‑1 (MQ=255)
                      tgtgCTGGGTATCAC‑GAAGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGTCCCACCCTTTTTC‑CGCGCTCCGTCCGGGGTTTTTTTGGATGGGTTTTCacccg                                                                                                                                                                                                        >  2:426028/1‑225 (MQ=255)
                         gCTGAGTACCAC‑GAAGGTTTTCCGCGTTGAATAACTCGAAATGTCTGGCGCGCGGAGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCGTCATATATCGCATTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑AACAAT‑CCGAGCGTTTTCAAGGCATCGGTCAGGGGTTTTTGGAGATGGATTTCCAG‑ACGttg                                                                                                                                                                                                    >  2:172232/1‑227 (MQ=255)
                             ggTATCAC‑GAAGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGt                                                                                                                                                                                                <  1:535442/229‑1 (MQ=255)
                             ggTATCAC‑GAAGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTCCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGGTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGt                                                                                                                                                                                                >  1:406897/1‑229 (MQ=255)
                                  ccc‑GAATTTTTTGCGGGTTTAATAACACGAAAGGGGCGGGGGGGGGGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTCCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAg                                                                                                                                                                                           <  2:406897/227‑1 (MQ=255)
                                  cAC‑GACGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGGA‑ATCAGT‑CCACGCCTTTTCACGGCATTGGTCAGGGGTTTTTTTAGATGGCTTTCCCG‑ACGTGGGCGTTCggg                                                                                                                                                                                           >  1:58669/1‑227 (MQ=255)
                                  cAC‑GAAGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGGTTTTGTAGATGGCTTTCCAT‑ACGTGGGCGTTCggg                                                                                                                                                                                           >  1:61289/1‑227 (MQ=255)
                                     cgtaGTTTTTGCGGGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCAGTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATTCCTTCATATATCGATTTTGGAATGCGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGt                                                                                                                                                                                          <  1:216459/225‑1 (MQ=255)
                                        cgTTTTTGCGCGTTCAATAACAAGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTATGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGGGCACATC‑GT‑CCCACCATTTTTCAGCCATGGGTCAGGGGGTTTTCTGAATGGCTTTCCAA‑ACCTGTGCgatgacggaagt                                                                                                                                                                                      >  2:486589/2‑218 (MQ=255)
                                        aGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCCGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGCTTTTGGAATACGGGTTTCTTTGCTGCCGGGCGCA‑ACCACT‑CCACGCCTTTTCAGGGCATCGTTAAGGAGGTTTTTGAGATGGGTTTCCAG‑GCGTTGGGGTTCGCGTAAGt                                                                                                                                                                                      >  2:232999/1‑229 (MQ=255)
                                          tttttGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGC‑CCACGCATTTTTACGGTACCGGTCAGGAGGTTTTTTAGATGGCCTTTCAG‑ACGAGGGCGTTCGAGTAAGtt                                                                                                                                                                                     >  1:68590/1‑228 (MQ=255)
                                          tttttGCGCGTTCAATAACACGAAATGCCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCGGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCCCGCATTTTCACGTCATCGGGCAGGAGTTCTTGTAGATGGCTTTCCAG‑ACTTGGGCGTTCGataaaagtc                                                                                                                                                                                    >  1:230421/1‑221 (MQ=255)
                                              tGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGCTAATGGTCTGGTTACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCCGA‑ATCAGT‑TCCCACCATTTCACGGCATCGGGTCGGGGTTTTTTTTGATGGCTTTCCCA‑CCTTGGGGGGTCGAGGAAGTTcaggg                                                                                                                                                                                >  2:427513/1‑225 (MQ=255)
                                                    ttCAATAACACGAAATGGCTGTGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGGCTGGATACCTTCATATATCGATTTTGGAATCCGGGTTTCTTTGCTGGCGGGCGCA‑ATTAGT‑CCCCGCATTTTCCCGGCACCGGGCAGGAGTTTTTGTAGATGGCTTTCCCA‑ATGTGGGCGGTCGAGTAAGttgtgtggggaag                                                                                                                                                                          >  1:334087/1‑218 (MQ=255)
                                                            cacGAAATGGCTGGGGCGCGTGGCCCAGTATGGATTGATTTGCAACTCCAGCATACAAATCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTg                                                                                                                                                                   <  2:562000/228‑1 (MQ=255)
                                                              cGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGGTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCACCGGTAAGGGGGTTTTGTGGGAGGCGTTCCAG‑ACGCGGGCGTTCGGGGAAGTTCGGGGGGAATGCAGATTGATa                                                                                                                                                                >  1:136308/1‑229 (MQ=255)
                                                               gAAATGGCTGGGGTGCGTTGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCGGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATa                                                                                                                                                                <  1:158923/228‑1 (MQ=255)
                                                                 aaTGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGGGTTTTTGTGAGTGGGTTTCCGG‑GCGTGGTGGTTTGGGTAAGGTCGGTGTGAATGcgagttttatga                                                                                                                                                              >  1:712705/1‑217 (MQ=255)
                                                                 aaTGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCCG‑ACGTGGGCGTTCGGGTAAGTTCGGTGAGAATGCAGATTGATAGa                                                                                                                                                              >  1:22005/1‑228 (MQ=255)
                                                                  aggggtGGGGCGCTGTGCCCAGTATTGCTTGTATTGCAAACCCAGGATACAAACCAGATTGCGGTTAATGGGCTGGGTTCCTTCATATATCGATTTTGGAATGCGGGTTTCTTTGCTGGCTGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCAGCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGAcc                                                                                                                                                            <  2:334087/224‑1 (MQ=255)
                                                                                  tccacgtattgatttgtttGCAAACACAGCATACAAACCAGTTTTCGTTTATTGGTTTGGATACCTTCAAATATCTGTTTTGGAATACTGGTTTCTTTGCTGGCGGGCGTA‑ATCAGT‑CCACGCATTTTCACGGCATTGGTCAGGAGTTTTTGTAGATGTCTTTCCAG‑ACGTGGGCGTTCGAGGAAGGTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCa                                                                                                                                            <  2:126923/213‑1 (MQ=255)
                                                                                   cccAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCC‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGGGGTTTTGTAGATGGCTTTCCCG‑CCGTGGGCGTTCGGGTAAGTTCGGTGGGAATGCCGATTGAAAGACCCGGTTATAATCGGTCAg                                                                                                                                           >  2:238015/1‑229 (MQ=255)
                                                                                           gCATTGATTTGCAACTTCAGCATACAAACCAGAGTGCGGTTAATGGTCTGGATTCCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATGCTCGGTCAGACTTTTCg                                                                                                                                   <  1:232999/229‑1 (MQ=255)
                                                                                               tGATTTTCAATTTCAGCATGCAAACCAGATGTCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTGCTTTGCCGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAg                                                                                                                               <  1:470828/229‑1 (MQ=255)
                                                                                                 aTTTGGAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCGGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGtt                                                                                                                             <  1:585715/229‑1 (MQ=255)
                                                                                                 aTTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTTATAGACCCGATTTTATTCGGTCCGACTTTTTGCCACtt                                                                                                                             >  1:515196/1‑229 (MQ=255)
                                                                                                 aTTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCAAGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGGTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGGGTGAATGCTGATTTATAGAACCGATTTTACTCGGTCAGACTTTTCGCCAGtt                                                                                                                             >  1:600948/1‑229 (MQ=255)
                                                                                                  tttGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCCTTTTAACGGCATCGGTCAGGAGGTTTTGTAGCTGGCTTTCCAG‑ACGTGGGGGTTCGAGTAAGTTCGGTGAGAATGCAGATTGGTAGACCCGCTTTTACTCGGGCAGAACTTTTGCCAATTg                                                                                                                            >  2:76878/1‑229 (MQ=255)
                                                                                                           ccAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCCATTATACTCGGTCAGACTTTTCGCCCGTGGaaatggcc                                                                                                                    >  1:736746/1‑222 (MQ=255)
                                                                                                                      aCCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAAc                                                                                                         >  1:449716/1‑228 (MQ=255)
                                                                                                                      aCCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGGCAGGAGGTTTTGTAGATGGCTTTCCCG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGGTGAATGGGCCAGTgggttaaa                                                                                                         >  1:442714/1‑222 (MQ=255)
                                                                                                                       ccaagttgtgtttAATGGGCTGGATAACTTCCAATTTGGATTTTGGAATTGGGTGTTCTTTGCTGGCGGGTGCA‑ATCCGT‑CCACCGATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACGCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGc                                                                                                       <  2:498599/218‑1 (MQ=255)
                                                                                                                          gATTGCGGTTAATGGTCTGGATCCCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGc                                                                                                       <  1:537053/226‑1 (MQ=255)
                                                                                                                           aTTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCCTCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGGGGGAATGCAGATTGATAGACCCGATTATACTCGGGCAAGCTTTTCGCACGTTGAAATCGCCCGTGGGTGAAACCCC‑gg                                                                                                  >  2:57239/1‑228 (MQ=255)
                                                                                                                           aTTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTAACGGCATCGGTCAGGGGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGGGTAAATTCGGTGGGAATGAAGGTTGAAAGACCCGGTTATACTCGGTCAGACTTTTCGCCACGTGAATTCGCCGGGGGAGGaaacgccgt                                                                                                   >  2:219844/1‑222 (MQ=255)
                                                                                                                           aTTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTGTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTTACGGCCTCGTTCAGGCGTTTTTGTAGATGACTTTCCAGAACGT‑GGCTGTCGAGTAAGTGCGGTGTGATGGCGTATTGATAAACCCGATTAGACTCGGTCAGACTTTTTCACATGCGCATGAGCCAGTGGATGAACGCCC‑G‑t                                                                                                 >  2:534124/1‑229 (MQ=255)
                                                                                                                                     aTGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGAc                                                                                                                                                             >  1:286811/1‑161 (MQ=255)
                                                                                                                                     aTGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGAc                                                                                                                                                             <  2:286811/161‑1 (MQ=255)
                                                                                                                                      tggtattgaatgcTTCATTTTTCGATTTTGGCATACGGGTTTCTTTGCTGGCGGGCGCA‑GTCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGa                                                                                       <  1:143917/216‑1 (MQ=255)
                                                                                                                                      tGGGCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTGTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGa                                                                                       <  1:732728/228‑1 (MQ=255)
                                                                                                                                           tggactccTTCATATATCGTTTTTGTAATTGGGGTTTCTTTGCTGGCGTGCGCA‑ATCATT‑CCACGCATTTGCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCg                                                                                  <  2:210633/222‑1 (MQ=255)
                                                                                                                                           tGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGAc                                                                                                                                                             <  1:507731/155‑1 (MQ=255)
                                                                                                                                                   ttCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGGGGTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGCGTAAATTCGGTGAGAATGCAGATTGATAGACCCGATTATACACGGTCAGCCTTTTTGCCAGTTGAATGCGACAGTGGATGAAAGGCC‑GCTTGGGGCGA‑AAACCGGTaacaaaa                                                                         >  2:499670/1‑224 (MQ=255)
                                                                                                                                                   ttCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGCTCGGTGAGAATGCAGATTGCTAGACCCGATTATAACCGGTCAGACTTTTTGCCAGTTGAATGCGCCCGCGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAaaccac                                                                         >  1:242104/1‑229 (MQ=255)
                                                                                                                                                     cattttttgATTTTGGAATACGGGTTCATTTGCTGGCGGGTACA‑CAGAGT‑CCGCGCGTTTGCAGGGCATCGGTCAGGGGCGTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGGAAGTTCGTTGAGAAGGCAGAGTGATAGACCCGATGATACGCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCTGTAAacaacag                                                                       <  2:89395/221‑2 (MQ=255)
                                                                                                                                                     cATATTTCGTTTTTGGAATCGGGGTTTCTTGTCTGGCGGGCGCA‑ATCAGT‑CCACGAATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACAt                                                                       <  2:46052/229‑1 (MQ=255)
                                                                                                                                                     aatatttCGATTTTGGAATACGGGTTTCTTTGGTGGCGGGTGGA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGATTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACAt                                                                       <  2:334447/228‑1 (MQ=255)
                                                                                                                                                       tatatCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCCTTTTCACGGCATCGGTCAGGGGGTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTTGGAATGTGGATTGATAAACCCGATTATACTCGGGCCGACTTTTCGCCAGTTGAATGGGCCAGTGGGTGAACGCCCGG‑TTGGGCCCAGA‑AACGGTAAAAAACAttc                                                                     >  2:646382/1‑228 (MQ=255)
                                                                                                                                                       tatatCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGTTTGATAGAACCGGTTATTATCGGTCAGCCTTTTCGCCAGTTGAATGCGCCAGGGGATGAAACCCC‑G‑TTGTGGCCACATACCGGTAAAAAAAAtt                                                                      >  2:296364/1‑228 (MQ=255)
                                                                                                                                                         tcgcGATTTTGGGAACCGGGTTTCCTTGTGGGCGGGCGCA‑ATCAGT‑CCACGAATTTGCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTAGAGTAAGTTCGGTGAGAATGTAGATAGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGc                                                                    <  2:727294/225‑1 (MQ=255)
                                                                                                                                                            cGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGGGTTTTTGTAGATGGCTTTCCCG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGGTTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCCGTTGAATGCGCCCATGGATTAAACCCC‑G‑TTGTGGCCAGTAACCGGTGAAAAACATTGcccca                                                                >  2:102026/1‑226 (MQ=255)
                                                                                                                                                            cGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGGGAGAATTCAGATTGATAGACCCGATTAAACTCGGTCAGACTTTTCGCCCGTTTAATGCGCCAGGGGGTGAACGCCC‑C‑TTGTGGCCAGATACCGGTAaacacacttgcccgt                                                                >  1:217966/1‑218 (MQ=255)
                                                                                                                                                               ttttGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATTAGT‑CCACGCATTTTTACGGCCTCGGTCAGGAGTTTTTTTAGATGGCTTTCCCG‑ACGTGGGCGTTCGGGTAAGTTGGGGGAGAATGCGGGTTTATAAAACACATCATTCTCGGCAAGACTTTTCGCCCGCTGGATGGTCCCACGGATCAAAGCCC‑G‑TTGTGGCCAGATACCGGGAAAACACAATGccctctaa                                                             >  2:113642/1‑223 (MQ=255)
                                                                                                                                                                  tGGTATTCGGGTTTCTTTGGTGGCGGGCGCA‑AACAGT‑CCACTCATTTTCACGGCATCGGTCAGGGTGTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTGCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAagag                                                          <  2:22005/229‑1 (MQ=255)
                                                                                                                                                                    ggatgcGGGTTTTGTGGCTGGCGGGCTCA‑ATCAGT‑CCACGCAGTTTGACGGCAGCGGTCAGGAGTTTTTGGAGATGGATTTCCAG‑ACGGGGGCGTTCGAGTAAGGTCGGGTAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑GTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGcc                                                        <  2:429088/224‑1 (MQ=255)
                                                                                                                                                                                        gtgggctCA‑ATCAGT‑CCACGCATTTTAACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACGCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCtt                                     <  1:672738/226‑1 (MQ=255)
                                                                                                                                                                                          ggggggtgaatcgtcacgctccttttCGCGGATTCGGTCAGGAGGTTTTGTAGATGGGTTTCCAA‑ACGTGGTGGTTCGAGTAAGTTCGGTGAGAATGCAGGTTGAGAGACCCGATTATACTCGGTCAGACTTTTGGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCtt                                     <  2:206046/206‑1 (MQ=255)
                                                                                                                                                                                             cgcA‑ATCAGG‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCAt                               <  1:57239/229‑1 (MQ=255)
                                                                                                                                                                                                   actcgtcccccctttttCCGGGCATCGGTCAGGAATTTTGTTAGATGGCTTTCCAG‑GCGTGGGCGTTCGAATAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACg                           <  2:242104/216‑1 (MQ=255)
                                                                                                                                                                                                            cGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGCCTTTTCGCCAGTTGAATGCGCCAGCGGATGAACGCCC‑G‑TTGGGTCCCGGTACCGGTAAACAACATGTCCCGTAAAACGCCGAGGAGCCAATCACCCGTTCACCATAACGCCCTACCaa                  >  2:237004/1‑229 (MQ=255)
                                                                                                                                                                                                            cGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCaa                  >  1:452060/1‑229 (MQ=255)
                                                                                                                                                                                                            cGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCACCGCTTCGCCATAACGCCGt                       >  1:697655/1‑224 (MQ=255)
                                                                                                                                                                                                              cATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCAAtt                >  1:281294/1‑229 (MQ=255)
                                                                                                                                                                                                              cATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCCCCGCTTCGCCAAAAAGCCGGATCAAtt                >  1:364381/1‑229 (MQ=255)
                                                                                                                                                                                                                  ttCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑Ttg                                                                                               <  1:618825/146‑1 (MQ=255)
                                                                                                                                                                                                                  ttCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑Ttg                                                                                               >  2:618824/1‑146 (MQ=255)
                                                                                                                                                                                                                  ttCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCGGCTTCCCCATAACGCCGTATCAATTTCAc            >  1:296316/1‑229 (MQ=255)
                                                                                                                                                                                                                   tccggggatgtggtaGGATTTTTTGTAGATGGCTTTCCCG‑ACGGGGGCGTTCGATGAAGTTCGGGTGGAATGCAGATTGATAGACCCGATTAGACTCGGTCAGACTGTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCAATTTCAc            <  2:544551/214‑1 (MQ=255)
                                                                                                                                                                                                                       ggCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCCTAACGCCGTACCAATTTCACCttc        >  1:574537/1‑226 (MQ=255)
                                                                                                                                                                                                                         cATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCCGATACCGGTAAACAACATTGCCAGTAAAGAGCCCAGGATAAAATCGCCCCTTCCCCATAACGCCGTAACAAATTCACCTGGCgg     >  2:663523/1‑229 (MQ=255)
                                                                                                                                                                                                                          aTCGGTGAGGGGTTTTTGTAGATGGCTTTCCGG‑ACGGGGGCGATCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGGCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCAATTTCACCTGTCggg    <  2:736745/229‑1 (MQ=255)
                                                                                                                                                                                                                          aTCGGTCAGGGGTTTTTGTAGATGGCTTTCCAG‑ACGGGGGCATTCGGGTAAGTTCGGTGAGAATGCAGATTGATAGGCCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATCCCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCAATTTCACCTGTCggg    <  2:574536/229‑1 (MQ=255)
                                                                                                                                                                                                                           ggggTCAGGAGTTTTGGTAGATGGCTTTCCAG‑GAGTTGGCGTTCGAGTAAGTTCGGTGAGGATGCAGATTGATAGCCCCGATTATACTCGGTCAGACTTTGCGCCAGGTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCAATTTCACCTGTCgggg   <  1:580125/227‑1 (MQ=255)
                                                                                                                                                                                                                            tggTCAGGTGTTTTGGGAGGTGGGTTTCCAG‑ACGTGGGCGTTCGAGGAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTAAACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCAATTTCACCTGTCGGGGa  <  2:281294/228‑1 (MQ=255)
                                                                                                                                                                                                                            cGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTTTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGGGGATCACACCGCCGCTTCGCCCTAACGCCCGATCAAATTACCCTAGCGGGGa  >  2:412879/1‑229 (MQ=255)
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                               
CTCAGCAGTATTTGCTGCATCATGTGCTGGGTATCAC‑GAAGTTTTTGCGCGTTCAATAACACGAAATGGCTGGGGCGCGTGGCCCAGTATGCATTGATTTGCAACTCCAGCATACAAACCAGATTGCGGTTAATGGTCTGGATACCTTCATATATCGATTTTGGAATACGGGTTTCTTTGCTGGCGGGCGCA‑ATCAGT‑CCACGCATTTTCACGGCATCGGTCAGGAGTTTTTGTAGATGGCTTTCCAG‑ACGTGGGCGTTCGAGTAAGTTCGGTGAGAATGCAGATTGATAGACCCGATTATACTCGGTCAGACTTTTCGCCAGTTGAATGCGCCAGTGGATGAACGCCC‑G‑TTGTGGCCAGATACCGGTAAACAACATTGCCAGTAAAGAGCCGAGGATCACATCGCCGCTTCGCCATAACGCCGTATCAATTTCACCTGTCGGGGA  >  NC_000913/2079750‑2080195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A