Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F97 I2 R1
|
11 |
65.9 |
2309030 |
94.5% |
2182033 |
142.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,160,853 |
C→T |
intergenic (‑64/‑270) |
sthA ← / → fabR |
pyridine nucleotide transhydrogenase, soluble/transcriptional repressor of fabA and fabB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,160,853 | 0 | C | T | 95.7%
| 190.4
/ NA
| 71 | intergenic (‑64/‑270) | sthA/fabR | pyridine nucleotide transhydrogenase, soluble/transcriptional repressor of fabA and fabB |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (31/36); minor base G (3/0); total (34/37) |
| Fisher's exact test for biased strand distribution p-value = 1.09e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCAGGCCCATTGCAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGCCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAA > NC_000913/4160714‑4160992
|
ccAGGCCCATTGCAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCaa > 1:324271/1‑143 (MQ=255)
cAGGCCCATTGCAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTCTACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAAt < 1:631215/143‑1 (MQ=255)
aGGCCCATTGCTGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAAtt < 2:719965/143‑1 (MQ=255)
gCCCATTGCAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTCTACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGGCAAttca > 2:444771/1‑141 (MQ=255)
gCCCATTGCAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGa > 2:169241/1‑143 (MQ=255)
cccATTGCAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGAt < 2:894477/143‑1 (MQ=255)
cAGCGCCTTCGCCGCCGGGGCCGGGACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTc < 2:389646/143‑1 (MQ=255)
cAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAGGTCCATTGATCCCCGTc > 1:1055118/1‑143 (MQ=255)
cAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATGTTATCGCGGGTAAGTCAATTGATCACAGTc > 1:622453/1‑143 (MQ=255)
gcgcCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCAt < 1:1093163/143‑1 (MQ=255)
gcgcCTTCGCCGCCGGGGCCGGAACCTAATACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCAt < 2:339675/143‑1 (MQ=255)
ctgcgccgcCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTAt < 2:105341/140‑1 (MQ=255)
cTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCACTTGATCCGCGTCATTTAt > 2:49130/1‑143 (MQ=255)
ttCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATc < 1:798269/143‑1 (MQ=255)
gctgccgGGGCCGGAACCTATTATTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTATCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTgg < 2:649085/140‑1 (MQ=255)
gccgccGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTATGTCAATTGATCCCCGTCATTTATCTgg < 2:141304/143‑1 (MQ=255)
gccgccGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTgg < 2:747334/143‑1 (MQ=255)
gcgctgGGGGCGGAGACTCTTAATACGGCATCGTAATCGTAGGAATGTGGCAGGGTAGGGCTTACCTGTTCTGATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGc < 1:629911/142‑1 (MQ=255)
ccgccgGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATGTTATCGCGGGTAAGTGAATTGATCCCCGTCATTTATCTGGc > 2:100786/1‑143 (MQ=255)
cgccgGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCt < 1:862969/143‑1 (MQ=255)
gccgGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCta < 1:550156/143‑1 (MQ=255)
gggtgcGGAATCTGTTACTATGGCAGCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTatat < 2:390352/138‑1 (MQ=255)
gCCGGAGCCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCt < 2:686271/143‑1 (MQ=255)
tgctagtgCATCGTAATCGCAGGAATGTGGCATGGTAGGGCTTACCTGTTCTGATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGGAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCctttg < 2:951745/136‑1 (MQ=255)
aCTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATACCCGTCGTTTATCTGGGTATATGCTGAGCGGCcgttgc > 1:197173/1‑143 (MQ=255)
cTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCctttgct > 1:1074306/1‑143 (MQ=255)
tATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCctttgctt > 1:514599/1‑143 (MQ=255)
gtGGCATCGTAATCGGAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCcgttgcttt < 2:442969/142‑1 (MQ=255)
atcgtaatcgtaGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAAGGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCCATACCCTGAGCGACCTCTGCTGTGTCTg > 2:148935/1‑143 (MQ=255)
tcgtatccctaGTAATGGGGCATGGTCGGGCTTAGCTGTTCTTGCCCCTCCAGCCAGCAGAATGGTAACCTCGTATCGCGGCTCAGTCAATTGCTCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGt < 2:511032/134‑1 (MQ=255)
cgtaatcgtaGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGtt > 1:1071173/1‑143 (MQ=255)
cgtaatcgtaGGAATGTGGCATGGTAGGGCTTACCTGTTATTATACATAAAAGCAACAGAATGGTAACATTTTATAGCGGGAAAGTCAATTGATCCGCGTTGGTTGTCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGtt > 1:718731/1‑143 (MQ=255)
gtaatggtaGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGttt < 2:363899/143‑1 (MQ=255)
taatcgtaGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCACGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTc > 2:167761/1‑143 (MQ=255)
tcgtaGGAATGTGGCATGGTAGTGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTa < 2:77903/143‑1 (MQ=255)
taGGAATGCGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGGCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCGCTTGCTTTGTCGGTTTGTTGCtt > 2:315113/1‑143 (MQ=255)
taGGAACGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCCTTTATCTGGCTCTCTCCTTAGCGGCCTTTGCTTTGTCTCTTTCTTACtt > 1:299550/1‑143 (MQ=255)
ggAATGGGGCATGGTAGGGCTTACCTGTTCCTATACATAAAAGCAACAGAATGGTAACATTTTCTCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACtttt < 1:659365/143‑1 (MQ=255)
gAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATATATCTGGCCATAACCTGAGCGGCCTTGGCTTTGTCTGTTTCTTAGTTTTg > 2:392533/1‑143 (MQ=255)
aagggggtaTGGTAGCGCTTACCTGTTCTTATGCATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGTTCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGc < 2:764761/135‑1 (MQ=255)
aaTGTGGCATGGGAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGc < 2:766586/143‑1 (MQ=255)
tgGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGACTGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTg < 2:888415/143‑1 (MQ=255)
tgGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTACGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTg > 1:1153930/1‑143 (MQ=255)
tgGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATTTCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTg > 1:784272/1‑143 (MQ=255)
gggCTTACCTGTTCTTATACATAACAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCGCCGTCTTGTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTAtt < 2:1003033/143‑1 (MQ=255)
gggCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTTTATCCTGAGCGGCCTTTGCATTGTCTGTTGCTTACTTTTGCCCTCAGGTTTTAta > 2:786677/1‑142 (MQ=255)
ggCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATATGGCTATATCCTGAGCGGCCTCTGCTTTGTCTGTTTCTTACTTTTGCCCTGCCGCCTTATTg > 2:228541/1‑143 (MQ=255)
cTTACCTGTCCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTTACGTTTTATTGGa < 1:75355/143‑1 (MQ=255)
ttACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGAt > 2:628682/1‑143 (MQ=255)
aCCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCACTTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGAttt < 1:897593/143‑1 (MQ=255)
cTGTTCTTATACATAAAAGCAACAGAATGGTAACAGTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGAttttt < 1:55975/143‑1 (MQ=255)
ataCATAAAAGCAACAGAATGGTACCATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGTCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATcgacga < 1:820522/143‑1 (MQ=255)
ataCATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATcgacga < 1:1150109/143‑1 (MQ=255)
aTAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATAct > 1:566220/1‑143 (MQ=255)
aTAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCATCATATATCTGGCTATATCCTGAGCGGCCTTTGCATTGTCTGTTTCTTACTTTTGGCATGCCGTTTTATTGGATTTTTATCTAGTATAct > 2:260093/1‑143 (MQ=255)
aagtagcAGAATGGTAACATTTTATCGCGGGTAGGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTcc < 2:657485/137‑1 (MQ=255)
aGCAACAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTTTCGACGATattgtgcg > 2:971949/1‑136 (MQ=255)
caccacggggTGACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTAGATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACCTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCCttt > 2:199818/9‑143 (MQ=255)
aCAGAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTCTTGGATCTTTATCGACGATCCTCTCCGTTTa > 1:8788/1‑143 (MQ=255)
cAGAATGGTAACATTAGATGGCGGTGAGGTCAATTGATCCCCGTCATTTGTCTGGCTATATCCTGAGCGGCGTGTGCTTTGTCTGTTTCTTACTTTTGCGCTGACGTTTTCTTGGATTGTTGTGGACGATACTCTCGGGTTaa > 2:1010177/1‑143 (MQ=255)
gAATGGTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGc > 2:224933/1‑143 (MQ=255)
ggTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGCTTAACCGGCa > 2:921122/1‑143 (MQ=255)
gtaaacttttATCGCGGGTAAGTCAATTGCTCCCCGTCCGTTCTTTGTTGTTATCCGGAGCGGCCTTTGCCTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAg < 1:315113/137‑1 (MQ=255)
gTAACATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTCTATCCTGAACGCCCTTCGCTTTGTCTGTTTCTTACTTTTGCCCCGACGCTTTATTGCCTTTTTAGTGCCGATACTCTCCGTTTCAGCgaccg > 2:953200/1‑139 (MQ=255)
aaCATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGt < 1:188115/143‑1 (MQ=255)
aCATTTTATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGCCTGTTTCTTACTTTTGCCCTGACGCTTTACTGGATTTCTGTCGACGATACTCTCCGTTTaacgcgcagctt > 2:25989/1‑133 (MQ=255)
cATTTTACAGGGGGTAAGGCAATTGATCCCCGTCATTTATATGGCTATATACTGAGCAGCGTTTTCTTTGTCTGTTTCTTAGTTTTGCTCTAACGTTTTTTTGTTTTTTTATCGCCTATCCGCCGCTTTTATGCAGCAGGttt > 2:199551/1‑143 (MQ=255)
ttATCGCGGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGc < 2:139122/143‑1 (MQ=255)
cgGGTAAGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGCTTAAGCGGCAGGTCTCCGCTGTCCg > 1:114411/1‑143 (MQ=255)
gTAAGCTAATTCCTCCCCTTCATTTATCTGGCTATATGCTGAGCGGCTTTTGCTTTGTCTCTTTCTTACTTCTGCCCGCACGTTTGAGTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTaa < 2:1062883/143‑1 (MQ=255)
aaGTCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTaaaa < 1:169241/143‑1 (MQ=255)
|
CCAGGCCCATTGCAGCGCCTTCGCCGCCGGGGCCGGAACCTATTACTATGGCATCGTAATCGTAGGAATGTGGCATGGTAGGGCTTACCTGTTCTTATACATAAAAGCAACAGAATGGTAACATTTTATCGCGGGTAAGCCAATTGATCCCCGTCATTTATCTGGCTATATCCTGAGCGGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAA > NC_000913/4160714‑4160992
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
