Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F105 I1 R1
|
13 |
156.0 |
5108104 |
95.4% |
4873131 |
148.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,187,645 |
G→C |
G766R (GGT→CGT) |
rpoC → |
RNA polymerase, beta prime subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,187,645 | 0 | G | C | 98.7%
| 549.3
/ NA
| 155 | G766R (GGT→CGT) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (83/70); minor base A (1/1); total (84/71) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 155 total aligned reads displayed.
TTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTG > NC_000913/4187499‑4187790
|
tttCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGTGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGt > 1:1263048/1‑149 (MQ=255)
tttCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGt > 2:1551190/1‑149 (MQ=255)
ttCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTc < 1:1834069/149‑1 (MQ=255)
ttCCATCAACTGCATCAACATGTTGGCCGACTCCGGTGCGCGTGGTGCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTTGTCTTATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCTCCGCGAACTTCCGTGAACGTc < 1:1620623/149‑1 (MQ=255)
tCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGCAACGCCAATCACCGCGAACTTCCGTGAACGTCt > 2:410291/1‑149 (MQ=255)
ccTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCCATCACCGCGAACTTCCGTGAACGTCTg > 1:1764565/1‑149 (MQ=255)
cTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGa > 1:454090/1‑149 (MQ=255)
ttCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGaa > 1:2483320/1‑149 (MQ=255)
ttCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGaa > 1:559526/1‑149 (MQ=255)
tCAACAGCATCTACATTATTGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGCTTCGTCAGCTTGCTGGTATGCCTGGGCTGATGGCGAAGCCGGATGGCTCCAACATAGCAACGCCAATCACCGCGAACATCCGTTCACGTCTGAAc > 2:1672645/1‑149 (MQ=255)
aCAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTa > 1:491975/1‑149 (MQ=255)
gCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTc > 2:1967385/1‑149 (MQ=255)
aCATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCATGAACGTCTGAACGTACTCCAGTAc > 1:876784/1‑149 (MQ=255)
cATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACt > 2:1137644/1‑149 (MQ=255)
cATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACt > 1:1991554/1‑149 (MQ=255)
atgatgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACtt < 2:346398/149‑1 (MQ=255)
atgatgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACtt > 2:2199859/1‑149 (MQ=255)
gatgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTCCTCCAGTACTTCa > 1:1329926/1‑149 (MQ=255)
gatgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCa > 2:933747/1‑149 (MQ=255)
gatgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCa > 1:1578104/1‑149 (MQ=255)
tgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCAtc < 1:397527/149‑1 (MQ=255)
tgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCAtc < 1:2233759/149‑1 (MQ=255)
ggCCGACTCCGGGGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCAtct < 2:1051514/149‑1 (MQ=255)
ccGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTcc > 2:1348194/1‑149 (MQ=255)
ccGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTcc > 2:2495993/1‑149 (MQ=255)
cGACTCCGGTGCGCGTGGTTCTGCGGCGCAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGACACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTccc > 2:865716/1‑148 (MQ=255)
gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTTGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTccac < 2:571628/149‑1 (MQ=255)
gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCTGATGGCTCCATCATCGAAACGCCAATCACCGCTAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTccac < 2:1717204/149‑1 (MQ=255)
cTCCGGTGCGCGTGGTTCTGCGGCAGAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGTAACGGCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTgcaccc < 2:1248484/149‑1 (MQ=255)
ggTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACgg > 2:542591/1‑149 (MQ=255)
ggcgcGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCATCCACGGTg < 2:1810743/148‑1 (MQ=255)
gcgTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTc < 1:870046/149‑1 (MQ=255)
gcgTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTc < 2:200612/149‑1 (MQ=255)
gcgTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTc < 1:1635345/149‑1 (MQ=255)
gcgGGGTGCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGGCTGAGGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTc < 1:2096068/149‑1 (MQ=255)
cTGCGGCCCAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATAGAAACGCCCATCACCGCGAACTTCCGTGAGCGTCTGAACGTACTCCAGTACGTCATCTCCACCCCCGGTGCTCGTAAAggg > 2:1015211/1‑148 (MQ=255)
gCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATATCCACCCACGGTGCTCGTAAAGGTCt < 2:1020579/149‑1 (MQ=255)
gCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGc < 1:485488/149‑1 (MQ=255)
gCACAGATTCGTCAGCTTGCTGGTATGAGAGGTCTGATGGCGAAGCCTGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGc < 1:2104432/149‑1 (MQ=255)
cactGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTTCTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCg < 2:97209/149‑1 (MQ=255)
cacaGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCg > 1:2513755/1‑149 (MQ=255)
cacaGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAACCCGGATGGCTACATCATCGAAAAGACAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTACAAACACGGTGCTCGTAAAGGTATTGCg > 2:1370109/1‑149 (MQ=255)
aGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACAGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGAt > 2:2170396/1‑149 (MQ=255)
cGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGc > 1:1915096/1‑149 (MQ=255)
tGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGaaaa < 2:1894882/149‑1 (MQ=255)
tGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTg < 1:294701/149‑1 (MQ=255)
ggTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGc < 1:1595791/149‑1 (MQ=255)
ggTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGc < 2:559526/149‑1 (MQ=255)
ggTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGc < 1:1241406/149‑1 (MQ=255)
ggTATGCGTGGGCTGATGGCGAAGCCGGATGGCTCCAGCATCGAAACGCCAATCACCTCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGc < 1:1357874/149‑1 (MQ=255)
gTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCg > 1:372155/1‑149 (MQ=255)
tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAAc > 1:666899/1‑149 (MQ=255)
ggTCTGATGGCGAAGCCGGAGGGCTCCAGCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCgg < 1:319540/149‑1 (MQ=255)
gTCTGATGGTGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGt < 2:1263048/149‑1 (MQ=255)
gTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGt < 1:168304/149‑1 (MQ=255)
gTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGt > 2:1490036/1‑149 (MQ=255)
tGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTCCTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCCCAGAAAACTGCGAACTCCGGTTAc > 1:2166787/1‑149 (MQ=255)
gATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAcc < 2:1227714/149‑1 (MQ=255)
aTGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCt > 1:2067707/1‑149 (MQ=255)
aTGGCGAAGCCGGAGGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCt < 1:919280/149‑1 (MQ=255)
cGAAGCCGGATGGCTCCATCATAGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACt < 1:955647/149‑1 (MQ=255)
gAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtc > 2:1194388/1‑149 (MQ=255)
gAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtc > 2:16024/1‑149 (MQ=255)
gAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtc > 2:6146/1‑149 (MQ=255)
aaGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtcg < 1:2170396/149‑1 (MQ=255)
aGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtcgt > 2:2450940/1‑149 (MQ=255)
aGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtcgt > 2:1908687/1‑149 (MQ=255)
gCCGGATGGCTCCATCATCGAAACCCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtcgtc < 1:1348194/149‑1 (MQ=255)
ggATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCgtcgtc < 2:2272090/149‑1 (MQ=255)
aTGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTg < 2:1253533/149‑1 (MQ=255)
ggCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGt > 2:1714350/1‑149 (MQ=255)
cTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCAGGttt > 1:622193/1‑148 (MQ=255)
tCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTgc > 2:1369971/1‑148 (MQ=255)
tCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGACGTCTGGTTgc > 2:1973480/1‑148 (MQ=255)
tCCATCATCGAAACGCCAATCACCGCGAACTTCCATGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGa < 2:876784/149‑1 (MQ=255)
ccATCATCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGAc < 2:1238214/149‑1 (MQ=255)
catcatCGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACg > 2:409287/1‑149 (MQ=255)
atcGAAACGCCAATCCCCGCGAACTTCCGTGACAGTCTGAACGTACTCCAGTACTTCAGCTCCACCCACGGTGCTCGTAAATGTCTGGCGGATACCGCACTGAGAACTGCGAACTCCGGTTACCTGCCTAGTCGTCGGGTTGACGTggg > 2:1659270/1‑148 (MQ=255)
tcGAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGgcg > 2:207948/1‑149 (MQ=255)
gAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCa < 2:726031/149‑1 (MQ=255)
gAAACGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGCCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCa > 1:1478419/1‑149 (MQ=255)
aaaCGCCAATCACCTCGAACTTCCGTGAAAGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAg < 2:609649/149‑1 (MQ=255)
aaaCGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAg < 2:491975/149‑1 (MQ=255)
aaaCGCAAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGAGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGGTGACGTGGCGCAg > 1:2420008/1‑149 (MQ=255)
cGCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGAc < 2:346419/149‑1 (MQ=255)
gCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCCTCTCCACCCACGGTGCTCGTAAAGGTCTCGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTTGCGCAGGAcc > 2:881986/1‑149 (MQ=255)
gCCAATCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGAcc > 1:1414839/1‑149 (MQ=255)
aaTCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtgg < 1:1137644/149‑1 (MQ=255)
aaTCACCGCGAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtgg < 1:441684/149‑1 (MQ=255)
aTCACCGCGAACATCCGTGAACGTCTGCACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggt < 2:1680249/149‑1 (MQ=255)
cgcgAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTa > 1:137970/1‑149 (MQ=255)
cgcgAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTa > 1:2055417/1‑149 (MQ=255)
gcgAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTAc < 1:1967385/149‑1 (MQ=255)
gcgAACTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACAGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGGCCTGGTGGTTAc > 2:559715/1‑149 (MQ=255)
aCTTCCGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGaa > 1:1060798/1‑149 (MQ=255)
cGTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGa < 1:1315600/149‑1 (MQ=255)
gTGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGAGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCGGGTGGTTTCCGAAGACGAt > 1:2545820/1‑149 (MQ=255)
tGAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTTACGTGGCGCAGGACCTGGTGGTTACCGAAGACGAtt > 2:1261732/1‑149 (MQ=255)
gAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATtg < 2:666899/149‑1 (MQ=255)
gAACGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATtg < 1:169627/149‑1 (MQ=255)
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TTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTG > NC_000913/4187499‑4187790
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
