Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F31 I1 R1
|
11 |
155.2 |
5089904 |
95.2% |
4845588 |
148.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,188,513 |
G→T |
G1055V (GGT→GTT) |
rpoC → |
RNA polymerase, beta prime subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,188,513 | 0 | G | T | 100.0%
| 535.7
/ NA
| 165 | G1055V (GGT→GTT) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (100/65); total (100/65) |
Only 100 of 169 total aligned reads displayed.
GATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCGGGT > NC_000913/4188368‑4188658
|
gATGGCGAACAGGTTACTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGttct < 1:1912803/149‑1 (MQ=255)
ggCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGttctgtc > 2:998317/1‑149 (MQ=255)
aGGTTGCTGGCGGCGAAACCGTTGCAATCTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCtg < 1:1397413/149‑1 (MQ=255)
aGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTACCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGCCGGCCAGACCATTACGCGTCAGACCGACGACCTGACCGTTCTGTCTTCGCtg > 1:232654/1‑149 (MQ=255)
ggTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCtgg < 1:1118828/149‑1 (MQ=255)
gTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCtggt > 2:1277127/1‑149 (MQ=255)
ttGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGGTATCACCGAAGTAAGCGGTTTTGTACGCGTTACTGACATGATCGACGGCCAGCCCATTACGCGTCAGACCGACGAACTGACCGTTCGGTCTTCGCtggtg > 1:1326572/1‑149 (MQ=255)
tGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGGTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCtggtgg < 1:1779760/149‑1 (MQ=255)
cTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTAATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGAACGACGAACTGACCGTTCTGTCTTCGCTGGTGGtt > 1:331775/1‑149 (MQ=255)
ggcggcGAAACCGTTGCAAACTGGGACCCGCACACCATGGCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCt < 2:2470374/149‑1 (MQ=255)
ggcggcGAAACCGTTGCAAACTGGGACCCGCAAACCATGCCGGTTATCACCGAAGTACGCGGTTTTGTACGCTTTACGGACATTATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCt < 1:807878/149‑1 (MQ=255)
ggcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGa < 1:1999076/149‑1 (MQ=255)
gcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGAt > 2:1440986/1‑149 (MQ=255)
gAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTc > 1:1446661/1‑149 (MQ=255)
aaaCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTcc > 2:905004/1‑149 (MQ=255)
aaaCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGAACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGACAGACCGACGAACTGACCGTTCTGTCTACGCTGCTGGTTCTGGATTcc > 1:1831250/1‑149 (MQ=255)
aaCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTAAGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTccc > 2:1144365/1‑148 (MQ=255)
aCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGc < 1:2234387/149‑1 (MQ=255)
gTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGa > 2:340507/1‑149 (MQ=255)
gTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGa > 1:1124657/1‑149 (MQ=255)
gCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGTTTTTGTACGATTTACTGACATGATCGACGGACAGACCATTACGCGACAGACCGACGAACTGACCGTTATGTCTTCGCTGGTGGTTCTTGATTCCGCAGAACg > 2:230833/1‑149 (MQ=255)
aaaCTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTa > 2:606844/1‑149 (MQ=255)
ggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAg > 2:869465/1‑149 (MQ=255)
ggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAg > 2:2541947/1‑149 (MQ=255)
aCCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGCCCATTACGCGTCAGACCGACGACCTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggt > 1:1341772/1‑149 (MQ=255)
aCCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGCCCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggt > 2:2046060/1‑149 (MQ=255)
gCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTa > 2:2065679/1‑149 (MQ=255)
acCATGCCGGTTATCACCTAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGa < 2:249228/149‑1 (MQ=255)
acCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGa > 1:284767/1‑149 (MQ=255)
cATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGAta > 2:1360366/1‑148 (MQ=255)
aTGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCt < 1:1488926/149‑1 (MQ=255)
tGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTg > 2:1902159/1‑149 (MQ=255)
gCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGCCATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGc > 1:1945544/1‑149 (MQ=255)
gCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGc < 1:998317/149‑1 (MQ=255)
gCCGGATATCACAGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCACTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGc < 2:2038877/149‑1 (MQ=255)
ccGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCg > 1:2356993/1‑149 (MQ=255)
cGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCgg > 2:1351509/1‑148 (MQ=255)
ggTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTc > 2:1923367/1‑149 (MQ=255)
gTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTcc > 2:1762399/1‑149 (MQ=255)
aCCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACt > 1:282417/1‑149 (MQ=255)
aCCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACt > 2:800522/1‑149 (MQ=255)
aCCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGGCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACt < 1:1574267/149‑1 (MQ=255)
ccGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGCCGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGGTCTGGATTCCGCAGATCGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTg < 1:980545/149‑1 (MQ=255)
aaGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCg > 1:1405396/1‑149 (MQ=255)
aGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACTAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGt < 1:1002015/149‑1 (MQ=255)
aGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGt < 1:1010774/149‑1 (MQ=255)
aGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGt > 1:2281299/1‑149 (MQ=255)
gCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTTCGCGTCAGACCGACGAACTGACCGTGCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGtt < 1:1978694/149‑1 (MQ=255)
cGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACAGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTg > 2:1661993/1‑149 (MQ=255)
gTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCa > 1:49500/1‑149 (MQ=255)
gTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCa < 1:1351907/149‑1 (MQ=255)
tACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAg > 1:1287171/1‑149 (MQ=255)
tACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAg > 1:1715825/1‑149 (MQ=255)
tACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAg > 2:287356/1‑149 (MQ=255)
tACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTATGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAg > 2:1713432/1‑149 (MQ=255)
tACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGATGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCac > 1:669130/1‑148 (MQ=255)
gCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGt > 1:161794/1‑149 (MQ=255)
tttACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTaa > 1:1573548/1‑149 (MQ=255)
tttACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTaa > 2:384378/1‑149 (MQ=255)
tGACATGATCGACGGCCAGCCCATTACGCGTCAGCCCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAacgacg > 2:541617/1‑149 (MQ=255)
tGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAacgacg > 2:842000/1‑149 (MQ=255)
tGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAacgacg > 2:654457/1‑149 (MQ=255)
aCATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAAACGTTGATGCTCAGGGTAACGACGtt > 1:895519/1‑149 (MQ=255)
aCATGATCGACGGCCAGAACATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAAAGAACAGCAGGTGGTAAATATCTGCGTCCGGCACTGAAAATCTTTCATGATCAGGGTAACGACGtt > 2:1299661/1‑149 (MQ=255)
cttGATCGACGGCCAGACCATTACGCGTCAGACCGACGATCTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTTGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGTGTAACGACGTTc < 2:705548/147‑1 (MQ=255)
cATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTc > 1:2108593/1‑149 (MQ=255)
aTGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCCCTGAAAATCGTTGAGGCTCAGGGTAACGACGTGCt > 1:489368/1‑149 (MQ=255)
aTGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCt < 2:1124657/149‑1 (MQ=255)
tGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTg > 2:2160405/1‑149 (MQ=255)
ctCGACGGCCAGACCATTACGCGTAAGACCGACGAAATCACAGTTCTGTTTTCGCTGGTGGTCCTGGTTTCCGCAGATCGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCTTTGATGCTCAGGGTAACGACGTTCTGAt < 2:1605259/148‑1 (MQ=255)
aTCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGAt < 1:1797181/149‑1 (MQ=255)
aCGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCa < 2:193539/149‑1 (MQ=255)
aCGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCa > 2:1993440/1‑149 (MQ=255)
aCGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTACTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCa > 2:469213/1‑149 (MQ=255)
cGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTTCCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAg < 1:1316471/149‑1 (MQ=255)
gCCAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGt > 1:2192415/1‑149 (MQ=255)
cAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTATAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTAc > 2:1300928/1‑149 (MQ=255)
cAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTAc > 2:1768149/1‑149 (MQ=255)
cAGACCATTACGCGTCAGACCGACGAACTGACCGTTCTGACTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTCAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTAc > 1:2428867/1‑149 (MQ=255)
gACCATTACGCGTCAGACCGACGAACTGACAGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCg > 1:1928863/1‑149 (MQ=255)
ccATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGat < 1:2256497/149‑1 (MQ=255)
cATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGAACCGata > 1:1040014/1‑149 (MQ=255)
cATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGCTAACGata > 1:2520072/1‑149 (MQ=255)
cATTACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTACGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGata > 2:1753171/1‑149 (MQ=255)
tACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGc < 1:1751441/149‑1 (MQ=255)
tACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGc < 1:121136/149‑1 (MQ=255)
tACGCGTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGc < 1:970855/149‑1 (MQ=255)
cgcgTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCa > 1:1383143/1‑149 (MQ=255)
gcgTCAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAg < 2:1737724/149‑1 (MQ=255)
cAGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCa < 2:2127458/149‑1 (MQ=255)
aGACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAg > 2:107611/1‑149 (MQ=255)
gACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGt > 1:2113798/1‑149 (MQ=255)
gACCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGt > 1:2477943/1‑149 (MQ=255)
aCCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGATAATCGTTGATGCTCAGGGTATCGACGTTCTGATCCCAGGTTCCGATATGCCAGCGCAGTa > 2:722770/1‑149 (MQ=255)
aCCGACGAACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTa < 1:2065679/149‑1 (MQ=255)
acgaACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGAGCAGTACTTc > 1:2180484/1‑149 (MQ=255)
gaACTGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCACAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTccg > 1:2389816/1‑148 (MQ=255)
tGACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCg < 1:1902159/149‑1 (MQ=255)
gACCGTTCTGTGTTCGCTGGTGGTTCTGGAATCGGCAGAACGTTCCGCAGGTGGTAAAGAGCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTTACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCgg < 1:1704102/149‑1 (MQ=255)
gACCGTTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCgg < 1:869465/149‑1 (MQ=255)
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GATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCGGGT > NC_000913/4188368‑4188658
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
