Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F50 I2 R1
|
173 |
150.8 |
4954114 |
96.5% |
4780720 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,889,256 |
T→C |
T282A (ACG→GCG) |
cysI ← |
sulfite reductase, beta subunit, NAD(P)‑binding, heme‑binding |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,889,256 | 0 | T | C | 100.0%
| 476.1
/ NA
| 126 | T282A (ACG→GCG) | cysI | sulfite reductase, beta subunit, NAD(P)‑binding, heme‑binding |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (67/59); total (67/59) |
Only 100 of 126 total aligned reads displayed.
AATTTGATCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATG > NC_000913/2889108‑2889398
|
aaTTTGATCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGTTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCAt < 4:681966/151‑1 (MQ=255)
aaTTTGATCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCAt > 1:548656/1‑151 (MQ=255)
aTTTGATCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATg > 1:267781/1‑151 (MQ=255)
tttGATCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGc > 4:862051/1‑151 (MQ=255)
ttGATCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGc < 2:376321/150‑1 (MQ=255)
tGATCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTc > 2:126240/1‑151 (MQ=255)
tCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTcc > 4:1041550/1‑149 (MQ=255)
tCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTcc > 1:1567919/1‑149 (MQ=255)
ccGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCgg < 3:214845/151‑1 (MQ=255)
gcgcgACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGc > 1:1054527/1‑150 (MQ=255)
cgcgACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGc > 1:618568/1‑149 (MQ=255)
gcgACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGc > 4:600024/1‑148 (MQ=255)
gcgACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGc > 3:426253/1‑148 (MQ=255)
cgACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGc > 1:589403/1‑147 (MQ=255)
aCGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGAt > 3:230486/1‑149 (MQ=255)
ccACTTCCGCTTTAAACGTCTCACCCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCa < 1:1269459/149‑1 (MQ=255)
ccACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCaa < 1:1685618/150‑1 (MQ=255)
cACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAac > 1:811027/1‑151 (MQ=255)
cTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAactc > 1:1175640/1‑151 (MQ=255)
cTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAactc > 1:676669/1‑151 (MQ=255)
tCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAactca < 1:794479/150‑1 (MQ=255)
cTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTcgc > 4:693630/1‑151 (MQ=255)
cTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTcgc > 1:257022/1‑151 (MQ=255)
tttAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTcgcg > 1:1865523/1‑151 (MQ=255)
ttAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTcgcg < 4:1519632/150‑1 (MQ=255)
tAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCgg < 4:547119/150‑1 (MQ=255)
aaCGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGc > 4:129639/1‑151 (MQ=255)
aaCGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGc > 4:13279/1‑151 (MQ=255)
cGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCgg < 1:451857/151‑1 (MQ=255)
gTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCggg > 4:1512448/1‑151 (MQ=255)
tcAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCg > 1:1923362/1‑150 (MQ=255)
cAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGc < 4:375981/148‑1 (MQ=255)
cAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGc < 1:58259/148‑1 (MQ=255)
cAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGt > 1:274010/1‑150 (MQ=255)
cAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTa < 1:1546549/151‑1 (MQ=255)
aaCCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAg < 4:1164704/151‑1 (MQ=255)
ccccACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGtt > 1:558432/1‑151 (MQ=255)
cACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTc < 1:79976/151‑1 (MQ=255)
cgcgCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCtt < 4:148924/151‑1 (MQ=255)
gcgcTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCttg > 1:1614194/1‑151 (MQ=255)
gcgcTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCtt < 4:48809/150‑1 (MQ=255)
cgcTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCttg < 1:1776371/150‑1 (MQ=255)
tCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGc > 1:616304/1‑151 (MQ=255)
ccAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGc < 1:37780/150‑1 (MQ=255)
cAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCg > 3:377677/1‑151 (MQ=255)
aGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCgt < 1:1290044/151‑1 (MQ=255)
aGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCgt > 1:1121595/1‑151 (MQ=255)
cGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCgtgt > 3:228617/1‑151 (MQ=255)
gtgtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCgtgt > 3:88996/1‑150 (MQ=255)
gtgtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGtt < 4:368876/151‑1 (MQ=255)
tgtATTTGGTTTTGGCATTTTTATGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGtt < 4:505474/150‑1 (MQ=255)
gtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCg < 2:142460/151‑1 (MQ=255)
tATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCg > 4:1743578/1‑150 (MQ=255)
aTTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGAt > 4:629247/1‑151 (MQ=255)
tttGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGAt < 4:442655/150‑1 (MQ=255)
tttGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGAt < 1:1371219/150‑1 (MQ=255)
tttGGTTTTGGCATTTTTACGACCGGTTCGGTTACCCCAGTCACGCTGATTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTGGGTTTTCTTGTTGCCGTGTTCGAt < 1:1487054/150‑1 (MQ=255)
ggTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTTTCTCGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGaa < 4:778278/151‑1 (MQ=255)
ggTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGaa < 1:1550894/151‑1 (MQ=255)
ggTTTAGGCATTTTTACTATCGGTTCGGTTACCCCAGTCCCGCTGAGTGGTGACGACGGCTACGGCCGCCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGaa < 1:206817/151‑1 (MQ=255)
gTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGaaa < 2:146043/151‑1 (MQ=255)
ttttGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGaa > 3:76215/1‑149 (MQ=255)
ttGGCATTTTTACGATCGGTTCGGTTCCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAgc < 1:1392289/150‑1 (MQ=255)
tGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAgccc > 1:1792417/1‑151 (MQ=255)
tGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAgccc > 1:1170014/1‑151 (MQ=255)
ggCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAgccc > 3:96803/1‑150 (MQ=255)
ttttACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAgcccaccgcc > 1:270990/1‑151 (MQ=255)
ttACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAgcccaccgccc > 1:1477022/1‑150 (MQ=255)
tACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGAAGGTTTTCTTGTTGCCGAGTTCGATGGAAAgcccaccgcccac > 2:494913/1‑151 (MQ=255)
aCGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAACgcccaccgcccacc > 2:481846/1‑151 (MQ=255)
aCGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAgcccaccgcccacc > 1:629283/1‑151 (MQ=255)
gATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCaa < 4:1371920/151‑1 (MQ=255)
gATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCaa < 1:363234/151‑1 (MQ=255)
cggttcggttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACa < 3:449265/150‑1 (MQ=255)
gttcggttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCCCCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGt < 1:1086704/151‑1 (MQ=255)
cggttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTaa < 4:1866245/151‑1 (MQ=255)
cggttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTa < 4:1902890/150‑1 (MQ=255)
ggttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTaaa < 2:426267/151‑1 (MQ=255)
ttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAg < 3:196059/150‑1 (MQ=255)
aCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGccc > 4:62400/1‑151 (MQ=255)
gTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAg < 4:1827375/150‑1 (MQ=255)
tCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCt > 4:1431107/1‑151 (MQ=255)
aCGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCtt > 1:1821829/1‑150 (MQ=255)
gAGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCg < 4:762590/149‑1 (MQ=255)
aGTTGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGttt < 4:138054/151‑1 (MQ=255)
tGTCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCg > 1:383289/1‑151 (MQ=255)
tCACGACGGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCgg < 4:528070/150‑1 (MQ=255)
gacgGCTTCGGCCGCCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATc < 1:1573901/151‑1 (MQ=255)
acgGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCg > 1:554977/1‑151 (MQ=255)
cgGCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGGCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCg < 4:299018/143‑1 (MQ=255)
gCTTCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGcc > 4:1147242/1‑150 (MQ=255)
ttCGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACg > 4:1396562/1‑151 (MQ=255)
cGGCCTCCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCAc < 4:304449/148‑1 (MQ=255)
cGGCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGa > 1:1384595/1‑150 (MQ=255)
gggcACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCGCTCGCGGTGCGGGCGTAGGTTTGCTTGTTGCCGTGTTCGATGGAAAGCCCGCCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGa < 3:276950/146‑1 (MQ=255)
gCCACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGt > 4:857301/1‑151 (MQ=255)
ccACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGtt < 1:1127779/151‑1 (MQ=255)
cACCGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTc > 1:1408773/1‑151 (MQ=255)
ccGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCAt < 4:71724/151‑1 (MQ=255)
cGCCAGCGCATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATg > 1:1762879/1‑151 (MQ=255)
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AATTTGATCCCCGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATG > NC_000913/2889108‑2889398
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
