Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F50 I2 R1
|
173 |
150.8 |
4954114 |
96.5% |
4780720 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,272,271 |
Δ1 bp |
coding (481/885 nt) |
garR ← |
tartronate semialdehyde reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,272,268 | 0 | C | . | 99.1%
| 553.4
/ ‑3.4
| 115 | coding (484/885 nt) | garR | tartronate semialdehyde reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base . (60/53); minor base T (0/1); total (60/55) |
| Fisher's exact test for biased strand distribution p-value = 4.74e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 121 total aligned reads displayed.
TGCCCGCCAGTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTTCCCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGCATCCAGCATATCAA > NC_000913/3272118‑3272414
|
tGCCCGCCAGTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTTc > 2:90679/1‑151 (MQ=255)
tGCCCGCCAGTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTTc > 1:1491617/1‑151 (MQ=255)
gCCCGCCAGTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTTcc > 4:296990/1‑151 (MQ=255)
ccGCCAGTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTTcccg > 1:155297/1‑150 (MQ=255)
ccGCCAGTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTTcccg > 2:210391/1‑150 (MQ=255)
cAGTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTAt < 4:514797/151‑1 (MQ=255)
gTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGc < 1:148826/151‑1 (MQ=255)
tCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGc > 1:1521304/1‑150 (MQ=255)
cACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGcacc > 2:362657/1‑151 (MQ=255)
aCCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGcacc > 4:1517900/1‑150 (MQ=255)
cgcgAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACg > 4:691161/1‑151 (MQ=255)
cgcgAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACg < 1:1626540/151‑1 (MQ=255)
acgAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACgg > 1:162268/2‑151 (MQ=255)
cgAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGa < 1:1345958/151‑1 (MQ=255)
gAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGaa < 2:51060/151‑1 (MQ=255)
aTTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAAcc < 4:750898/151‑1 (MQ=255)
tGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCg > 1:1358964/1‑151 (MQ=255)
gCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCg < 1:476726/150‑1 (MQ=255)
gCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCg < 4:158724/150‑1 (MQ=255)
cTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGcc > 1:631104/1‑150 (MQ=255)
aTAACCCAGCCCCGGGTTACCGCCCGCTGTAGTCGCCTGCGTTATCGCTTCTGCCATCGCGGCAATATTCAGCGCGCCAATGACCTGATTTCCCAGTTTGGGGACGTTACCTGCACCGA‑TTCCCGGGTATGCCCGACGGATCCCGCCATc < 1:1483583/150‑1 (MQ=255)
tAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGc > 1:1235769/1‑151 (MQ=255)
aaaCCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCt > 2:108469/1‑151 (MQ=255)
aCCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCttt > 3:168244/1‑151 (MQ=255)
ccAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTtc < 3:299335/151‑1 (MQ=255)
ccAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTtc < 1:694126/151‑1 (MQ=255)
aGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTtcat > 4:1413234/1‑151 (MQ=255)
aGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTtcat < 3:433012/151‑1 (MQ=255)
gTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTtcatca < 2:360139/151‑1 (MQ=255)
tCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTtcatca > 1:1076235/1‑150 (MQ=255)
ccGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCaaa < 1:673702/151‑1 (MQ=255)
ccGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCaa < 1:21880/150‑1 (MQ=255)
gggTTAACGCCTGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGTTTTCATCAAATc > 3:118049/1‑151 (MQ=255)
ggTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTCACATCGCGGCAATATTCAGCGCCACAATGACCTTATTTGCCAGTTTGGTGACTTTACCTGCACCGATGT‑CCCGGTATTCTCCACGGAGCCCGCCATCGCTTTCATCaaa < 3:56346/148‑1 (MQ=255)
aaCGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGt < 4:1329621/151‑1 (MQ=255)
aaCGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGt > 1:797591/1‑151 (MQ=255)
aCGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGt > 4:1166615/1‑150 (MQ=255)
cGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGt < 1:338170/151‑1 (MQ=255)
cGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGt < 1:1113554/151‑1 (MQ=255)
gCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTc < 1:407300/151‑1 (MQ=255)
gCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTc > 4:1246257/1‑151 (MQ=255)
cTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTc < 4:1689024/150‑1 (MQ=255)
tttAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCg > 1:703559/1‑150 (MQ=255)
ttATTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTTCCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGa < 4:268871/150‑1 (MQ=255)
tAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGaa > 4:729319/1‑150 (MQ=255)
gCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAg < 2:61738/150‑1 (MQ=255)
gCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAg < 1:1325610/150‑1 (MQ=255)
aGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCtt < 1:253113/151‑1 (MQ=255)
aGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCtt < 4:33729/151‑1 (MQ=255)
gCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTg < 2:181864/151‑1 (MQ=255)
cGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGt < 4:452361/151‑1 (MQ=255)
cGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGt < 4:1082314/151‑1 (MQ=255)
gTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTc > 4:1091691/1‑151 (MQ=255)
aCGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTcgccg > 1:1414188/1‑151 (MQ=255)
tCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCccac > 3:326796/1‑151 (MQ=255)
gACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCccacc < 4:664463/149‑1 (MQ=255)
aCATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATc > 1:67494/1‑151 (MQ=255)
cATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATc > 4:1339414/1‑150 (MQ=255)
cATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATc > 4:1580806/1‑150 (MQ=255)
cATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATc > 4:929406/1‑150 (MQ=255)
aTCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCAc > 4:1401332/1‑151 (MQ=255)
cgcgGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTg < 1:574162/151‑1 (MQ=255)
ggCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGAc > 4:1550906/1‑150 (MQ=255)
gCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAg < 4:956477/151‑1 (MQ=255)
cAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGc > 1:73921/1‑151 (MQ=255)
cAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGc < 2:518378/151‑1 (MQ=255)
aaTATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGc < 1:1199874/150‑1 (MQ=255)
tatTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGt > 2:16904/1‑150 (MQ=255)
aatTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGt > 4:1190074/2‑150 (MQ=255)
gcgcCACAATGACCTGATTTGCCAGTTTGGTGACGTTTCCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCg < 4:1576194/151‑1 (MQ=255)
cgcCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCg > 1:1788300/1‑150 (MQ=255)
cacaATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGCCAGCGTACCGTCGATgg < 3:446296/151‑1 (MQ=255)
aTGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCttt < 2:32314/151‑1 (MQ=255)
tGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTc > 4:1706628/1‑151 (MQ=255)
tGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTc > 4:1721291/1‑151 (MQ=255)
gATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTc > 2:347175/1‑150 (MQ=255)
gATTTGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTc > 4:774807/1‑150 (MQ=255)
tGCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCAccgc > 4:399247/1‑151 (MQ=255)
gCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCAccgcc < 4:585821/151‑1 (MQ=255)
gCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCAccgcc > 2:371546/1‑151 (MQ=255)
gCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCAccgcc > 4:1648833/1‑151 (MQ=255)
gCCAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCAccgcc < 4:1626600/151‑1 (MQ=255)
ccAGTTTGGTGACGTTACCTGCCCCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCAccgcc < 4:1492213/150‑1 (MQ=255)
ccAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCAccgccg > 1:478858/1‑151 (MQ=255)
ccAGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCAccgccg > 2:152159/1‑151 (MQ=255)
aGTTTGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACcgccgc > 1:1288604/1‑150 (MQ=255)
tttGGTGACGTTACCTGCCCCGATTT‑CCCGGTATGCACCACGGACCCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTc < 1:1189565/150‑1 (MQ=255)
tttGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCCCCACGGAACCCGCCATCGCTTTCATCAAATCATAGTTTTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACGGACAGCGTCCCGTCGATGGCTTTCGGTTATCCGCCGCTc < 3:343319/150‑1 (MQ=255)
tttGGTGACGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTAGGTTCACCGCAGCTc > 3:18281/1‑150 (MQ=255)
aCGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGc > 1:3564/1‑151 (MQ=255)
cGTTACCTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGc > 1:436738/1‑150 (MQ=255)
ccTGCCCCAATTT‑CCGGGTATGCACCACAGAACCCGCCTTCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCCCCCCCCCCCATCCCTGACAGCGTACCGTCGATGGCTTTCGTTACACCGCCGCTCACCGGAGCATcc < 1:1487707/149‑1 (MQ=255)
ccTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGCATcc > 1:795160/1‑149 (MQ=255)
ccTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGCATCCAg < 4:1348445/151‑1 (MQ=255)
ccTGCACC‑ATTTTCCCGGTATGCCCCACGAAACCCCCCCTCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTAACACCTTACCGCCGATGCCTTTCGGTCCACCGCCGCTCACCGGAGCATcc < 1:818335/149‑1 (MQ=255)
cTGCACCGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGCATCCAGc > 4:1524106/1‑151 (MQ=255)
ccGATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTc < 1:1654076/116‑1 (MQ=255)
gATTT‑CCCGGTATGCACCCCGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCCCCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGCATCCAGCATATCaa < 4:1236293/151‑1 (MQ=255)
gATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGCATCCAGCATATCa > 3:507762/1‑150 (MQ=255)
gATTT‑CCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGCATCCAGCATATCa > 4:1609430/1‑150 (MQ=255)
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TGCCCGCCAGTCCACCGCGAATTGCCTGATAAACCAGGTCCGGGTTAACGCCCGCTTTAGTTGCCAGCGTTAACGCTTCTGACATCGCGGCAATATTCAGCGCCACAATGACCTGATTTGCCAGTTTGGTGACGTTACCTGCACCGATTTCCCCGGTATGCACCACGGAACCCGCCATCGCTTTCATCAAATCATAGTATTTGTCGAAAATAGCCTTGTCGCCGCCCACCATCACTGACAGCGTACCGTCGATGGCTTTCGGTTCACCGCCGCTCACCGGAGCATCCAGCATATCAA > NC_000913/3272118‑3272414
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
