Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F50 I2 R1
|
173 |
150.8 |
4954114 |
96.5% |
4780720 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,297,933 |
T→C |
Y69C (TAC→TGC) |
yraQ ← |
putative inner membrane permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,297,933 | 0 | T | C | 100.0%
| 509.3
/ NA
| 138 | Y69C (TAC→TGC) | yraQ | putative inner membrane permease |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (79/59); total (79/59) |
Only 100 of 138 total aligned reads displayed.
AACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGTAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACGAGAAAGAAA > NC_000913/3297786‑3298079
|
cAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATcc > 1:1133765/1‑151 (MQ=255)
aGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATcc > 1:1868305/1‑150 (MQ=255)
gCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCCCCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCaa < 3:355334/151‑1 (MQ=255)
cGTCCCCACCGGCGTGCCGCGAAAGCGCGATTGCCCAGGCGTACGCAACAACCAGCCACGCGGGAGCAGCACGTGAATCAACAAACCGAGTTTCCCCCCAAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCa < 3:313442/149‑1 (MQ=255)
gTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTTCGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGACCCGAGGTTCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCaa < 4:1874017/149‑1 (MQ=255)
tCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAAcgc < 4:1303218/150‑1 (MQ=255)
cccAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGCCACGCGGGATCAGACCATGAATCAACGAACCGAGGATCCCCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAAcgcca < 3:142145/151‑2 (MQ=255)
agcGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGcc > 4:874726/1‑151 (MQ=255)
tGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATgg > 4:864085/1‑151 (MQ=255)
ccGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGt > 1:1700226/1‑151 (MQ=255)
cgAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGtt > 1:723342/1‑149 (MQ=255)
aaaGCGCGATTGCCCAAGCGTACGCAACACCCAGTCACGCGGGATCAGCACCTGAATCACCGAACCGAGGATCCCCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTa < 4:301082/148‑1 (MQ=255)
aaaGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATGGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAg < 4:416263/149‑1 (MQ=255)
aaaGCCCGTTTGCCCAAGCGTACGCAACACCCAGTCCCGCGGGATCAGCACCTGAATCAACGAACGGAGGATCTCCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCa < 3:125301/151‑1 (MQ=255)
aaGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCAt > 1:1666546/1‑151 (MQ=255)
aGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATc > 1:1683832/1‑151 (MQ=255)
gcgcGATTGCCCAGGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCCCCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATcc < 1:1908493/151‑1 (MQ=255)
gcgcGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATcc > 2:510345/1‑151 (MQ=255)
cgcgATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCg > 1:1132236/1‑151 (MQ=255)
gATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCt > 4:407639/1‑151 (MQ=255)
aTTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTg > 3:46267/1‑151 (MQ=255)
tGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTgcg > 3:194704/1‑151 (MQ=255)
cccAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTgcgc > 2:83045/1‑150 (MQ=255)
cccAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCa < 1:1485129/151‑1 (MQ=255)
aaGCGTACGCAACAACCAGCCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCCCCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAgg < 4:1302109/151‑1 (MQ=255)
aaGCGTACGAAACAACCAGTCACGGGGGATCAGCCCCTGAATCACCGACCCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAgg < 4:391660/151‑1 (MQ=255)
accttACGCACCACCCAGTCACGCGGGATCAGCCCCGGAATAAAGGATCCGAGGATCACCCCCAGCTCCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCaa < 4:541998/144‑1 (MQ=255)
aGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCAGCGCa > 3:228422/1‑147 (MQ=255)
gTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGAt > 1:666950/1‑149 (MQ=255)
cGCACCAACCAGCCACGCGGGATCAGCCCCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGAt < 1:1813293/150‑1 (MQ=255)
gCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGAttt > 4:858831/1‑151 (MQ=255)
caacacCCAGTCACGCGGGATCAGCACCTGAATCAACGACCCGAGGATCCCCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGAtt < 1:103395/149‑1 (MQ=255)
caacaaCCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTTCGCAAGGATAGAttt > 4:569156/1‑150 (MQ=255)
aacaacCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTAc > 1:49180/1‑151 (MQ=255)
aacaacCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTAc > 4:849379/1‑151 (MQ=255)
caacCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCg > 4:1064009/1‑151 (MQ=255)
acccAGTCACGCGGGATCAGCCCCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCg < 1:1747208/148‑1 (MQ=255)
aacCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCg > 2:199799/1‑150 (MQ=255)
acCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGa > 1:1460682/1‑150 (MQ=255)
ccAGTCACGCGGGATCAGCACCTGAATCACCGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATa < 4:509440/151‑1 (MQ=255)
gcACGCGGAATCAGCCCCGAAATCAACGAACCGAGGATCCCCCCAAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACtg < 3:67881/149‑1 (MQ=255)
cACGCGGGATCAGCCCCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACtgt < 2:505482/150‑1 (MQ=255)
aCGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTgg > 4:17547/1‑151 (MQ=255)
cgcgGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTggg > 3:27191/1‑151 (MQ=255)
gggATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGttt > 3:324143/1‑151 (MQ=255)
ggATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTc > 1:1224452/1‑151 (MQ=255)
gATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCg > 1:589428/1‑151 (MQ=255)
aTCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCgg > 1:528442/1‑151 (MQ=255)
aTCAGCACCTGAATCAACGAAACGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCgg > 1:1359411/1‑151 (MQ=255)
tCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCgg < 4:1257869/150‑1 (MQ=255)
aGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGgca < 2:229835/150‑1 (MQ=255)
gCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGgcagc > 4:1880633/1‑151 (MQ=255)
ccgaaaccAACGAACCAAGGACCACCCCAATCTCCGCCGCTTCCCATCCCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGt < 4:1195847/144‑1 (MQ=255)
cTGAATCATAAAACCGAGGTGCACCCCCCCCCCCGCCGCGTTCCTTGCCGGGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTTCCATGGGGTGGCATCCGCCTGCGCAAGGATAGATTTTCCGATACTGTGGGGTTCGgcag < 1:1625593/146‑1 (MQ=255)
tGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTa > 2:391830/1‑150 (MQ=255)
aaTCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTaaa < 4:1775603/150‑1 (MQ=255)
aaCGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCtt < 4:1305989/151‑1 (MQ=255)
aCCAAGGACCCCCCCCACCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTg < 3:275951/148‑1 (MQ=255)
gAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCgt > 1:282627/1‑149 (MQ=255)
gAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCgt > 2:24970/1‑149 (MQ=255)
aGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCATGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCAgtag > 4:23391/1‑150 (MQ=255)
tCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAgg > 1:1002788/1‑151 (MQ=255)
tCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAgg > 4:1824047/1‑151 (MQ=255)
cccccccATCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAg < 4:34375/147‑1 (MQ=255)
cACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAgg < 4:551434/150‑1 (MQ=255)
ccAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCa < 4:1374718/151‑1 (MQ=255)
aGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCAtt > 1:1105576/1‑151 (MQ=255)
aGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCAtt < 2:119905/151‑1 (MQ=255)
ccgccgCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTcac < 3:16929/151‑1 (MQ=255)
ccgccgCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTca < 4:867050/150‑1 (MQ=255)
ccgccgCTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTc < 3:401587/149‑1 (MQ=255)
cgccgcTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTcac > 1:678308/1‑150 (MQ=255)
gccgcTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACAt < 4:587073/151‑1 (MQ=255)
gcTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATAcc > 4:619664/1‑151 (MQ=255)
gcTTTCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATAcc < 1:874352/151‑1 (MQ=255)
tttCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATAcc > 4:798178/1‑149 (MQ=255)
tttCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATAcc > 3:20487/1‑149 (MQ=255)
tCCATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCag > 4:1084388/1‑149 (MQ=255)
ccATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCag > 1:103016/1‑148 (MQ=255)
ccATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCag > 1:1195187/1‑148 (MQ=255)
cATACCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGAc > 1:1728871/1‑151 (MQ=255)
aCCGCGAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCg < 1:878309/150‑1 (MQ=255)
cgcgAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCg > 4:413005/1‑148 (MQ=255)
gcgAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCa > 1:498420/1‑150 (MQ=255)
gcgAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCa > 1:937469/1‑150 (MQ=255)
cgAGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAAt < 2:392995/151‑1 (MQ=255)
aGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATg > 1:1788718/1‑150 (MQ=255)
aGGAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATg > 3:49998/1‑150 (MQ=255)
ggAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGGCCGGCAATGa < 1:1661316/150‑1 (MQ=255)
ggAAATAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGAc > 1:1179860/1‑151 (MQ=255)
aaaTAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACaa < 1:918719/151‑1 (MQ=255)
aaaTAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACaa < 3:452035/151‑1 (MQ=255)
aaTAGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAAc > 1:1615474/1‑151 (MQ=255)
aGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACgag < 1:544944/151‑1 (MQ=255)
aGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACg > 4:1531235/1‑149 (MQ=255)
aGATCATCGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACg > 1:1373605/1‑149 (MQ=255)
atcatcGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCTATAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACgaga > 4:665801/1‑150 (MQ=255)
atcatcGCGCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACgaga > 4:1221103/1‑150 (MQ=255)
cgcgCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACGAgaaagaaa < 1:1558880/151‑1 (MQ=255)
cgcgCAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACGAgaaagaaa < 4:422518/151‑1 (MQ=255)
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AACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACCGCGAGGAAATAGATCATCGCGTAATCCAACGCCGCCTGCCATGGGTTAGCATCCGCCTGCGCAAGGATAGATTTACCGATACTGTGGGTTTCGGCAGCAGTAAACGCTTTGCCGTAGTAAGGTTCCCATTTCACATACCAGAGACCGGCAATGACAACGAGAAAGAAA > NC_000913/3297786‑3298079
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
