Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I1 R1
|
157 |
93.7 |
2947622 |
98.1% |
2891617 |
150.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,668,091 |
T→C |
E366E (GAA→GAG) |
yhjA ← |
putative cytochrome C peroxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,668,091 | 0 | T | C | 99.0%
| 372.0
/ ‑4.6
| 102 | E366E (GAA→GAG) | yhjA | putative cytochrome C peroxidase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (56/45); total (57/45) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 102 total aligned reads displayed.
GATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGTTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATT > NC_000913/3667943‑3668238
|
gATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTc > 2:1394850/1‑151 (MQ=255)
aTGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCCGACGCAATTTACCACGCTCTTCTTTAGTCACATTCATCCGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTc < 2:1100395/150‑1 (MQ=255)
tGGAAGTACGGTGCCGTTAAAGAAACGTTACGTAAACCGGATACTTTCTGACGCAATTTATCACGCTCTTCTTTATTCACATTCATTCGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTc < 2:1323010/149‑1 (MQ=255)
tACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAAc > 2:567294/1‑151 (MQ=255)
aCGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACg > 2:1457882/1‑151 (MQ=255)
cGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATACCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGt < 2:235355/151‑1 (MQ=255)
ccGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTccgcc > 1:337784/1‑151 (MQ=255)
cGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTccgccg > 1:86008/1‑151 (MQ=255)
cGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTccgccg > 1:328842/1‑151 (MQ=255)
ttAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTccgccg > 2:441648/1‑149 (MQ=255)
ttAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCga < 1:1447414/150‑1 (MQ=255)
tAAAGCAACGTTACGTAAATCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTccgccg > 1:1265367/1‑148 (MQ=255)
cAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGaataat > 2:82224/1‑151 (MQ=255)
cAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGaataat > 2:1330637/1‑151 (MQ=255)
aaCGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGaataat > 1:151843/1‑150 (MQ=255)
aCGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATac > 2:147166/1‑151 (MQ=255)
cGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATacc > 2:792024/1‑151 (MQ=255)
gTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATacc > 2:525197/1‑150 (MQ=255)
cGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCAt > 2:19167/1‑151 (MQ=255)
cGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCAt > 2:399158/1‑151 (MQ=255)
aaaCCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGa < 1:1184814/150‑1 (MQ=255)
aaaCCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGAc > 2:1216430/1‑151 (MQ=255)
aaaCCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGAc > 2:87952/1‑151 (MQ=255)
aaaCCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGAc > 1:508616/1‑151 (MQ=255)
aaCCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACa < 1:20841/151‑1 (MQ=255)
ccGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAg < 2:401991/151‑1 (MQ=255)
cGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGt > 2:923914/1‑151 (MQ=255)
tACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGc > 2:117458/1‑150 (MQ=255)
cTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACTACCAATACCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGcac < 2:782449/150‑1 (MQ=255)
tttCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACAt > 1:1081182/1‑151 (MQ=255)
ttCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACAtt > 1:164084/1‑151 (MQ=255)
tCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACAtt < 1:1400484/150‑1 (MQ=255)
gACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACAttt < 1:343312/148‑1 (MQ=255)
gACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATttat < 2:246480/150‑1 (MQ=255)
gACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATttat < 1:1394957/150‑1 (MQ=255)
gACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATtta < 1:497955/149‑1 (MQ=255)
aCGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATttatta < 1:446518/151‑1 (MQ=255)
tttATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATGCCACCATGACAAGTTGCACATtta < 1:357090/142‑1 (MQ=255)
ttATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTa > 2:284731/1‑150 (MQ=255)
tATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTaa < 2:130976/150‑1 (MQ=255)
aTCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAaat < 2:479892/151‑1 (MQ=255)
aTCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCACCAAAGTTAAAGGCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTaa > 1:208943/1‑149 (MQ=255)
tCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTaaa < 2:346942/149‑1 (MQ=255)
cttcttTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGa < 1:1261391/149‑1 (MQ=255)
ttcttTAGTCACATTCATACGCCCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGa < 2:244176/148‑1 (MQ=255)
tcttTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATa < 2:1326104/149‑1 (MQ=255)
tcttTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAg < 1:1025487/150‑1 (MQ=255)
tAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCttt > 2:1084387/1‑151 (MQ=255)
aGTCACATTCATACGACCAATATCCGCCGCCGTAATCTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCtttt < 1:1451650/151‑1 (MQ=255)
aTTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTg < 2:1270657/150‑1 (MQ=255)
aTTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGt > 2:303080/1‑151 (MQ=255)
aTTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGt > 2:66532/1‑151 (MQ=255)
ttCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGtt > 1:344894/1‑151 (MQ=255)
cATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGtt < 2:890871/149‑1 (MQ=255)
cATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTgc > 2:2566/1‑151 (MQ=255)
aCGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTgcg < 2:328802/149‑1 (MQ=255)
gACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGt > 1:56458/1‑151 (MQ=255)
gACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGt > 1:1219573/1‑151 (MQ=255)
gACCAATACCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGt < 2:201914/151‑1 (MQ=255)
aCCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTc > 2:19885/1‑151 (MQ=255)
ccAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCa < 2:932687/151‑1 (MQ=255)
cAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTc > 2:659337/1‑149 (MQ=255)
tatCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAgcg < 1:1473687/150‑1 (MQ=255)
atCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAgcgc > 1:121889/1‑150 (MQ=255)
ccgccgccgTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCAtt < 1:314772/151‑1 (MQ=255)
ccgccgTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCAtttt > 2:362843/1‑150 (MQ=255)
ccgccgTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTc > 1:758600/1‑151 (MQ=255)
ccgccgTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTc < 2:529261/151‑1 (MQ=255)
ccgTAATTACCCCAAACTTAAAGACTTTTTTCAGCCCCAAAGTCTCAAAGAAACGTCCCCCGAGAATAATACCACCATGCCAAATTGCACCTTTATTCTCTTTAAATAATTGACAGCCTTTTTTCTGTTGCGCCGTCAGCGCACTTTCa > 2:799904/1‑149 (MQ=255)
cgTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCAtct < 1:1072399/151‑1 (MQ=255)
tAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCAtctc < 2:838755/150‑1 (MQ=255)
aaTTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCcg > 1:133373/1‑151 (MQ=255)
aTTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCcgc < 2:1156507/151‑1 (MQ=255)
aTTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCcgc > 2:1278003/1‑151 (MQ=255)
tttCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCcgcg > 1:1366094/1‑151 (MQ=255)
tttCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCcgcg > 1:1281244/1‑151 (MQ=255)
tttCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCcgcg > 2:1461442/1‑151 (MQ=255)
ccccAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCa > 1:359100/1‑150 (MQ=255)
cAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAAcc > 2:414704/1‑150 (MQ=255)
cAAAGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAAc > 1:1223371/1‑149 (MQ=255)
aGTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCAttt < 2:208920/151‑1 (MQ=255)
gTTAAAGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTa < 1:949332/151‑1 (MQ=255)
aaaGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCa < 2:85997/151‑1 (MQ=255)
aaGTCTTTTTTCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCaa < 1:1075797/151‑1 (MQ=255)
tttttCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATgggg > 2:1018845/1‑151 (MQ=255)
tttttCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATggg < 2:1078419/150‑1 (MQ=255)
tttttCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATggg < 2:1265266/150‑1 (MQ=255)
tttttCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATgg < 1:19169/149‑1 (MQ=255)
ttttCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATgggg > 2:1252054/1‑150 (MQ=255)
ttCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAAt > 1:100477/1‑151 (MQ=255)
tCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATc > 2:1170476/1‑151 (MQ=255)
tCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATc > 1:1189251/1‑151 (MQ=255)
tCAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATc > 2:994103/1‑151 (MQ=255)
cAGCCCCAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATcc > 2:626223/1‑151 (MQ=255)
cccAACGGTTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCg > 1:79184/1‑151 (MQ=255)
ccAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGt < 2:1362248/151‑1 (MQ=255)
ccAACGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGt < 1:792102/151‑1 (MQ=255)
aaCGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCACAACCATTTATCAAATGGGGAATCCGGCGtaa < 2:792283/151‑1 (MQ=255)
cGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGtaatt > 2:854020/1‑151 (MQ=255)
cGGCTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGtaatt < 1:1341549/151‑1 (MQ=255)
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GATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCCGTAATTTCCCCAAAGTTAAAGTCTTTTTTCAGCCCCAACGGTTCAAAGGAACGTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATT > NC_000913/3667943‑3668238
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
