Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F50 I3 R1
|
105 |
107.9 |
3491495 |
95.1% |
3320411 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,151,636 |
G→A |
R117C (CGT→TGT) |
exbB ← |
membrane spanning protein in TonB‑ExbB‑ExbD complex |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,151,636 | 0 | G | A | 99.2%
| 490.3
/ NA
| 122 | R117C (CGT→TGT) | exbB | membrane spanning protein in TonB‑ExbB‑ExbD complex |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (58/63); minor base C (0/1); total (58/64) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 122 total aligned reads displayed.
TAGTGGTCTGCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGTTTAA > NC_000913/3151489‑3151783
|
tAGTGGTCTGCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTc > 2:203616/1‑151 (MQ=255)
gTGGTCTGCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTcc > 2:663462/1‑150 (MQ=255)
gTGGTCTGCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTcc > 4:15727/1‑150 (MQ=255)
gTGGTCTGCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCa < 1:902935/151‑1 (MQ=255)
tGGTCTGCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTcc > 2:78680/1‑149 (MQ=255)
cTGCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACgg > 2:908493/1‑151 (MQ=255)
gCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGCCCAACGACCGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACgg < 2:11284/149‑1 (MQ=255)
tGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTgg > 2:980521/1‑151 (MQ=255)
gcgATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTAc < 1:589128/151‑1 (MQ=255)
aTACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGtt < 1:1012128/151‑1 (MQ=255)
aTACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGtt > 2:1023868/1‑151 (MQ=255)
aTACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGtt < 2:87589/151‑1 (MQ=255)
aCCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCt < 2:948535/151‑1 (MQ=255)
ccAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCtt > 1:248410/1‑151 (MQ=255)
cAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCttt < 2:387432/151‑1 (MQ=255)
aaTAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCttt > 2:1193998/1‑150 (MQ=255)
aTAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTaa < 3:318604/151‑1 (MQ=255)
aaaGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAAt > 3:375338/1‑150 (MQ=255)
aaGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATAc > 2:1270999/1‑151 (MQ=255)
gTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTc < 1:276738/150‑1 (MQ=255)
gTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCg > 2:379304/1‑151 (MQ=255)
ttCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGt > 1:421251/1‑151 (MQ=255)
ttCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGt > 1:560685/1‑151 (MQ=255)
tCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTGCCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGt < 2:828881/150‑1 (MQ=255)
gatgCCCCGGGCCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTTCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTAtc < 2:1123467/150‑1 (MQ=255)
gCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTAtcgtc < 2:412983/150‑1 (MQ=255)
ccccAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGc > 2:88022/1‑151 (MQ=255)
ccccAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGc > 3:102829/1‑151 (MQ=255)
ccccAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGc < 1:1023529/151‑1 (MQ=255)
cccAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCt > 3:46459/1‑151 (MQ=255)
cccAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCt < 2:1152843/151‑1 (MQ=255)
ccAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTg < 4:194687/151‑1 (MQ=255)
aGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGcc > 2:457360/1‑151 (MQ=255)
cGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCt < 1:825587/151‑1 (MQ=255)
gTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTg < 2:493082/151‑1 (MQ=255)
gTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCAATGCGGCGCCCCGACCCTCCCGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTg < 2:1049785/151‑1 (MQ=255)
tACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTg > 2:63673/1‑150 (MQ=255)
aaaCAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGt > 2:5504/1‑151 (MQ=255)
aaCAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTCCCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGtt < 3:227125/151‑1 (MQ=255)
aaCAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGtt > 1:1009611/1‑151 (MQ=255)
aaCAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCGTCTGACAGtt < 4:335347/151‑1 (MQ=255)
cAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTc < 2:577893/150‑1 (MQ=255)
aGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCa < 1:1172873/151‑1 (MQ=255)
aacgaacgGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTc > 1:642801/1‑150 (MQ=255)
cgaacgGAGAAATCGCGCCGATGGTAGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCAtt > 3:340935/1‑151 (MQ=255)
aacgGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCt < 1:312467/151‑1 (MQ=255)
acgGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTg > 4:174673/1‑151 (MQ=255)
cgGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTgc < 3:68209/151‑1 (MQ=255)
ggAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTgcg > 2:1058851/1‑151 (MQ=255)
ggAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTgcg > 4:246952/1‑151 (MQ=255)
gagaAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTgcgc < 1:1187842/151‑1 (MQ=255)
agaAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTgcgat < 1:522365/151‑3 (MQ=255)
agaAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCt > 1:901285/1‑151 (MQ=255)
aaTCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCa < 2:954003/151‑1 (MQ=255)
tCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGAAGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCAtt > 2:503968/1‑151 (MQ=255)
cgcgCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGGCCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTg < 4:123112/151‑1 (MQ=255)
gcgcCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTg > 2:833988/1‑150 (MQ=255)
gcgcCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTg > 4:412666/1‑150 (MQ=255)
cgcCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAg < 2:790231/151‑1 (MQ=255)
ccGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCa < 3:389518/151‑1 (MQ=255)
cGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCa > 2:770129/1‑150 (MQ=255)
cGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCa > 3:161557/1‑150 (MQ=255)
gATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCaaa < 3:429381/151‑1 (MQ=255)
aTGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAAt > 2:438116/1‑151 (MQ=255)
tGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATg > 4:439291/1‑151 (MQ=255)
tGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTGCCAGCTCATTCTGCGCTTCATTGAGCAAATg > 1:1144262/1‑151 (MQ=255)
ggTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATg < 2:129310/150‑1 (MQ=255)
gTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCa < 1:649413/151‑1 (MQ=255)
gCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAg > 1:1044753/1‑149 (MQ=255)
ccAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCt < 3:47826/151‑1 (MQ=255)
gATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTaa < 1:1234529/151‑1 (MQ=255)
aTAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTa > 1:544881/1‑149 (MQ=255)
aTAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAg < 1:1068039/151‑1 (MQ=255)
aGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCt < 4:428856/151‑1 (MQ=255)
gCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCtt < 2:1116941/151‑1 (MQ=255)
ccGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCttt > 2:671316/1‑151 (MQ=255)
cGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCtttt < 4:164552/151‑1 (MQ=255)
tACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCt > 2:470245/1‑151 (MQ=255)
aCCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCt < 2:756002/150‑1 (MQ=255)
cgcgGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTAcc < 3:207659/151‑1 (MQ=255)
gcgGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTAcc > 1:1206725/1‑150 (MQ=255)
cgGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCa > 4:357475/1‑150 (MQ=255)
ggCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCaaa < 1:229373/151‑1 (MQ=255)
gCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCaaa > 2:1082702/1‑150 (MQ=255)
ccATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATc > 2:37449/1‑151 (MQ=255)
aTTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAg < 1:1271231/151‑1 (MQ=255)
tttGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAgc > 3:185658/1‑151 (MQ=255)
ttGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAgc < 4:228573/150‑1 (MQ=255)
gacCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGat > 4:158191/1‑151 (MQ=255)
gacCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGat < 2:1063169/151‑1 (MQ=255)
aCTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGt > 1:489368/1‑151 (MQ=255)
aCTGCGGCGACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGt > 3:189444/1‑151 (MQ=255)
tGCGGCGACCCGACACTCCAGACGGAAGCTGGCACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGtt > 1:1198594/1‑150 (MQ=255)
gcggcgACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTgg < 1:640131/151‑1 (MQ=255)
cggcgACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGc < 1:996981/151‑1 (MQ=255)
gcgACCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCt < 1:938393/151‑1 (MQ=255)
aCCCGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAGGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGt < 1:663595/151‑1 (MQ=255)
cccGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGtt > 1:1224143/1‑151 (MQ=255)
cGACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATAGTTGGCCTGGttt > 1:192320/1‑150 (MQ=255)
gACACTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGTTTaa < 4:450932/151‑1 (MQ=255)
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TAGTGGTCTGCGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGTTTAA > NC_000913/3151489‑3151783
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
