Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F50 I3 R1
|
105 |
107.9 |
3491495 |
95.1% |
3320411 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,590,692 |
T→C |
T74A (ACG→GCG) |
ugpA ← |
sn‑glycerol‑3‑phosphate ABC transporter permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,590,692 | 0 | T | C | 99.1%
| 429.6
/ ‑4.4
| 115 | T74A (ACG→GCG) | ugpA | sn‑glycerol‑3‑phosphate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (65/49); total (65/50) |
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.87e-01 |
Only 100 of 118 total aligned reads displayed.
CGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGTCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATAAAAAAGATAACG > NC_000913/3590545‑3590837
|
cggcAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCa < 2:967439/151‑1 (MQ=255)
aaCGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAg < 3:94822/151‑1 (MQ=255)
aCGGCGGGAGCCCCGGCGGAAGGCGGCAAAATTTAGGGTTGATAGAAACGGCCGCCGCGCACCATGTACTCCCCCAGCGCCGCACAGGACAGCGAGACCAGCAAACCGCTGACGGTGAGAAAGGAGCTGAATTTTCTCGGCGCCCAGAAgg > 3:340720/1‑151 (MQ=255)
gcggGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGt > 1:267562/1‑151 (MQ=255)
gAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCgag < 2:1100662/151‑1 (MQ=255)
cACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGAt > 3:350398/1‑149 (MQ=255)
ggCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGAtagta < 2:386289/150‑1 (MQ=255)
gCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGATATAGTAGc < 1:302106/151‑1 (MQ=255)
gCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGc < 3:206754/151‑1 (MQ=255)
cGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCt > 1:1062333/1‑151 (MQ=255)
gTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCt < 1:1052288/150‑1 (MQ=255)
aaGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGt < 1:419302/150‑1 (MQ=255)
aaGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTc > 1:243365/1‑151 (MQ=255)
caACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAAc < 2:307649/151‑1 (MQ=255)
cATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGc < 1:1069538/151‑1 (MQ=255)
aaGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGa < 4:255016/151‑1 (MQ=255)
aGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGAc < 1:1252500/151‑1 (MQ=255)
gTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACg > 3:340601/1‑150 (MQ=255)
gTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACg > 4:73682/1‑150 (MQ=255)
tttGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGa > 2:192116/1‑150 (MQ=255)
ttGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGaa < 2:130467/150‑1 (MQ=255)
ttGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGaa < 1:1048358/150‑1 (MQ=255)
ttGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGaa < 4:37802/150‑1 (MQ=255)
tGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGt > 2:844929/1‑151 (MQ=255)
gATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGtt < 3:167437/151‑1 (MQ=255)
gATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGtt < 1:496900/151‑1 (MQ=255)
gATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCACTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGtt < 2:1078560/151‑1 (MQ=255)
aaaCGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATcc > 2:967181/1‑150 (MQ=255)
aaaCGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATcc > 1:158791/1‑150 (MQ=255)
aaCGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGCGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATcc > 2:446670/1‑149 (MQ=255)
aCGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAgg > 2:1005471/1‑151 (MQ=255)
cGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGc > 1:775289/1‑151 (MQ=255)
cGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGc > 3:63868/1‑151 (MQ=255)
cGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGc > 1:1039611/1‑151 (MQ=255)
gCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGa < 1:781433/149‑1 (MQ=255)
gCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGAc < 3:316377/150‑1 (MQ=255)
ccGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACa > 4:389360/1‑150 (MQ=255)
ccGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACa > 4:265743/1‑150 (MQ=255)
cgcgCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACaa > 1:426431/1‑150 (MQ=255)
gcgcACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAAc < 2:866352/151‑1 (MQ=255)
gcACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAActg > 2:1140153/1‑151 (MQ=255)
gcACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAActg < 4:33843/151‑1 (MQ=255)
aCGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAActggc > 2:1256484/1‑151 (MQ=255)
gATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAActggctg > 2:686849/1‑151 (MQ=255)
gATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAActggct < 1:453854/150‑1 (MQ=255)
aTGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAActggctgg > 1:211830/1‑151 (MQ=255)
tGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGCGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAActggctg > 2:115065/1‑149 (MQ=255)
gTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAActggctgg > 1:556112/1‑149 (MQ=255)
caGCGCCGCAATGAACAGCGATACCAGCAACCCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAACGAGTCGAGATAGTAGCTATCAGGGAACAGCGTGACGAAGTTATCCAGGCAGACAAACTGGCTGGAGaac < 2:416286/145‑2 (MQ=255)
gcgcCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACgg > 1:320257/1‑151 (MQ=255)
cgccgcAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACgg > 4:170254/1‑150 (MQ=255)
cgccgcAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGa < 2:1233564/151‑1 (MQ=255)
cgccgcAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGa < 1:1222484/151‑1 (MQ=255)
gccgcAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGAt < 1:673008/151‑1 (MQ=255)
ccgcAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTTTCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATc > 1:26996/1‑151 (MQ=255)
cgcAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCg > 3:196210/1‑151 (MQ=255)
gcAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCg > 4:197766/1‑150 (MQ=255)
aaaGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACg > 3:29431/1‑151 (MQ=255)
aaaGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACg > 1:1046006/1‑151 (MQ=255)
gAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCtt > 1:843643/1‑151 (MQ=255)
aaCAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATTGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCttt < 2:1151107/151‑1 (MQ=255)
aCAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTg > 2:1145715/1‑151 (MQ=255)
cAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGt > 1:495196/1‑151 (MQ=255)
aCCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGt > 2:1199358/1‑151 (MQ=255)
aCCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGt > 2:226955/1‑151 (MQ=255)
cAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACcac > 2:101265/1‑151 (MQ=255)
aaCCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACcaca > 2:203521/1‑150 (MQ=255)
aCCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGTCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAAc < 1:693668/151‑1 (MQ=255)
aCCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAAc > 1:521355/1‑151 (MQ=255)
gCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCt > 2:815272/1‑151 (MQ=255)
gCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCt > 4:354522/1‑151 (MQ=255)
gCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCt > 2:358409/1‑151 (MQ=255)
gACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCg > 1:313105/1‑151 (MQ=255)
gACGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCg > 1:1137967/1‑151 (MQ=255)
aCGGTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGc < 1:476238/151‑1 (MQ=255)
gTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCg < 3:145196/151‑1 (MQ=255)
gTGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCg > 4:78012/1‑151 (MQ=255)
tGACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGc > 3:304077/1‑151 (MQ=255)
gACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGc < 2:1082436/150‑1 (MQ=255)
gACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGc < 2:305097/150‑1 (MQ=255)
gACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGc > 2:74901/1‑150 (MQ=255)
gACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCa < 4:340605/151‑1 (MQ=255)
gACAAAGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCa < 1:416832/151‑1 (MQ=255)
aaaGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGc > 2:1031167/1‑151 (MQ=255)
aGGTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCa < 3:170252/151‑1 (MQ=255)
gTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGcc > 2:338935/1‑148 (MQ=255)
gTGCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACACTTCGCCCGCAGGCCAGa < 4:51032/151‑1 (MQ=255)
gCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGAt > 1:30247/1‑150 (MQ=255)
gCTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGAGCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATa < 4:303306/151‑1 (MQ=255)
cTGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATa > 1:583167/1‑150 (MQ=255)
tGAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATaa > 1:471264/1‑150 (MQ=255)
gAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATaaaa < 1:1134295/151‑1 (MQ=255)
gAATTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATaaa > 2:724160/1‑150 (MQ=255)
aaTTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATaaaaa < 2:587593/151‑1 (MQ=255)
aaTTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATaaaa > 1:234777/1‑150 (MQ=255)
aaTTTTATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATaaaa > 1:1221323/1‑150 (MQ=255)
ttATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATAAAAAAGa < 1:385090/150‑1 (MQ=255)
tATCGTCGCCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATAAAAAAGAt < 4:177552/150‑1 (MQ=255)
cgtcgcCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACGGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATAAAAAAGATAACg > 2:917014/1‑151 (MQ=255)
cgtcgcCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATAAAAAAGATAACg > 1:280407/1‑151 (MQ=255)
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CGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCAAAGAACAGCGATACCAGCAAACCGCTGACGGTGACAAAGGTGCTGAATTTTATCGTCGTCCAGAAGGAGTCGAGATAGTAGCTGTCATGGAACAGCGTGACGAAGTTATCCAGGCCGACAAACTGGCTGGAGAAACCAAACGGATCGACGCTTTGTAGCGAGTACCACAACGCTTCGCCCGCAGGCCAGATAAAAAAGATAACG > NC_000913/3590545‑3590837
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
