Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F50 I3 R1
|
105 |
107.9 |
3491495 |
95.1% |
3320411 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,031,161 |
(A)6→7 |
coding (1/1332 nt) |
pepQ → |
proline dipeptidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,031,155 | 1 | . | A | 98.2%
| 459.2
/ ‑1.1
| 114 | intergenic (‑184/‑6) | fadB/pepQ | fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase/proline dipeptidase |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base A (60/52); total (62/52) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 134 total aligned reads displayed.
GTACCAGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑AA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTCGACGATCATC > NC_000913/4031005‑4031299
|
gTACCAGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑t < 1:442826/151‑1 (MQ=255)
tACCAGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑t > 1:97654/1‑150 (MQ=255)
tACCAGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑t > 2:479855/1‑150 (MQ=255)
aCCAGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa < 1:1025522/151‑1 (MQ=255)
aCCAGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑a > 1:1009297/1‑150 (MQ=255)
cAGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aa < 2:992064/151‑1 (MQ=255)
aGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aaa < 1:984206/151‑1 (MQ=255)
aGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aa > 1:1093247/1‑150 (MQ=255)
aGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aa > 2:742316/1‑150 (MQ=255)
aTGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aaaa > 1:222171/1‑150 (MQ=255)
gAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aaaaatg < 3:435201/151‑4 (MQ=255)
gAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aaaaatg < 1:634182/151‑4 (MQ=255)
aGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aaaaatgg > 3:343988/1‑147 (MQ=255)
aGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aaaaatgg < 1:901896/151‑5 (MQ=255)
gTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑aa‑aaaaatgga < 1:684398/151‑6 (MQ=255)
cGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAAt < 4:409559/151‑1 (MQ=255)
gAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATc > 2:1038371/1‑151 (MQ=255)
aaGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATc > 3:432290/1‑150 (MQ=255)
aaGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCa < 1:582654/151‑1 (MQ=255)
tgtATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGc > 2:249185/1‑151 (MQ=255)
tttGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGc > 4:434229/1‑151 (MQ=255)
ttGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGc < 2:144344/150‑1 (MQ=255)
ttGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGc < 2:1235370/150‑1 (MQ=255)
gtgtTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGctct > 1:1251510/1‑151 (MQ=255)
gtgtTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGctct < 2:1280244/151‑1 (MQ=255)
aaaTATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATaaaa > 2:1238020/1‑150 (MQ=255)
aaTATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAAt > 2:854241/1‑151 (MQ=255)
atatGCAAACAAAAGATTAAAGAGATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATc > 1:677174/1‑151 (MQ=255)
caaacaaaAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCatat > 3:445893/1‑150 (MQ=255)
aaacaaaAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCatat > 1:524285/1‑149 (MQ=255)
aaacaaaAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCatat > 4:22695/1‑149 (MQ=255)
ccacaaGATTAAAGCAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGGCA‑AA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGc > 2:202327/5‑150 (MQ=255)
acaaaAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCt < 2:750373/151‑1 (MQ=255)
caaaAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCTCTGGCCTCGCTCTATAAAAATCATATAGCTa < 1:1178837/151‑1 (MQ=255)
aaaGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTAcc < 2:971867/151‑1 (MQ=255)
aGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCtt > 3:408048/1‑151 (MQ=255)
aGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCtt < 2:240009/151‑1 (MQ=255)
gATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCtt > 2:578340/1‑150 (MQ=255)
gATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTa < 1:707757/151‑1 (MQ=255)
aaaGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAg < 1:1052395/151‑1 (MQ=255)
aaGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACa > 2:859352/1‑148 (MQ=255)
aGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGaa < 1:537585/151‑1 (MQ=255)
aaaTGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACg < 3:373683/151‑1 (MQ=255)
aaaTGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACg > 2:139762/1‑151 (MQ=255)
aaTGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACgg > 2:1236309/1‑151 (MQ=255)
aaTGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACgg > 1:854515/1‑151 (MQ=255)
tGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGAc > 2:631290/1‑151 (MQ=255)
aTCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTcgcg > 2:613347/1‑151 (MQ=255)
cTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGAt > 2:209271/1‑151 (MQ=255)
gATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTcgc < 3:295305/146‑1 (MQ=255)
gATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTcgc < 2:977034/146‑1 (MQ=255)
gATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTcgc < 2:880854/146‑1 (MQ=255)
gATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTcg < 1:1101878/145‑1 (MQ=255)
aTCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATgcg < 2:1202972/151‑1 (MQ=255)
aTCACGCGCGGCAGAAATCACGGGCTGGATGGACGATGTGCTAAGATGCGGAGACGTAAGGTCAAAAAAACAGAAGAG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATgc > 3:110367/1‑150 (MQ=255)
tCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATgcgc > 1:431581/1‑151 (MQ=255)
tCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATgcgc > 3:281900/1‑151 (MQ=255)
cACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCt < 3:192969/151‑1 (MQ=255)
aCGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTg > 1:589516/1‑151 (MQ=255)
cGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTgg < 1:271232/151‑1 (MQ=255)
tCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGgcgc > 3:181536/1‑151 (MQ=255)
cGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGgcgcg < 2:568254/151‑1 (MQ=255)
aGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTc > 3:313589/1‑151 (MQ=255)
gAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTc > 1:391115/1‑150 (MQ=255)
gAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTc > 2:338004/1‑150 (MQ=255)
gAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCa < 1:1199693/151‑1 (MQ=255)
aaaTCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCa > 2:545211/1‑150 (MQ=255)
cACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCt < 2:729673/150‑1 (MQ=255)
cGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTgg > 4:30225/1‑150 (MQ=255)
tGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGt > 4:206372/1‑151 (MQ=255)
aTGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTAc < 2:105125/151‑1 (MQ=255)
tGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACt > 4:298168/1‑151 (MQ=255)
gAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACtt < 4:225001/151‑1 (MQ=255)
cGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTAtt < 1:284806/151‑1 (MQ=255)
cGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTAtt > 4:106/1‑151 (MQ=255)
gATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTc > 3:213016/1‑151 (MQ=255)
aTGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCa < 1:58234/151‑1 (MQ=255)
tgtgCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCAc > 1:1264603/1‑151 (MQ=255)
tgtgCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCAc > 1:543423/1‑151 (MQ=255)
gtgCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCAc < 1:7312/150‑1 (MQ=255)
gCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTca < 2:1056806/151‑2 (MQ=255)
aaGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGc < 2:1009101/151‑1 (MQ=255)
gCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGc < 1:1238244/150‑1 (MQ=255)
cGGAGACTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTg > 3:347293/1‑151 (MQ=255)
gaCTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCa < 3:87848/151‑1 (MQ=255)
aCTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCa > 1:1172245/1‑150 (MQ=255)
cTTAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAAt > 3:338698/1‑151 (MQ=255)
tAAGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAAt < 4:286412/149‑1 (MQ=255)
aaGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGtt > 2:1154580/1‑151 (MQ=255)
aaGGTCAAAAAAACAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGtt < 2:421631/151‑1 (MQ=255)
aaaaaaaCAGAAGGG‑TAAA‑AAAATTGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTtctc > 4:124232/1‑151 (MQ=255)
aaaaaaaCAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTtctc < 2:96890/151‑1 (MQ=255)
aaaaaaaCAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTtct < 2:958830/150‑1 (MQ=255)
aaaaCAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTcgac < 1:732422/151‑1 (MQ=255)
aaaaCAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTcgac < 1:878836/151‑1 (MQ=255)
aaaCAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTcgacg < 3:38192/151‑1 (MQ=255)
aaaCAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTcgacg > 2:467136/1‑151 (MQ=255)
aaCAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTcgacg > 1:1078255/1‑150 (MQ=255)
cAGAAGGG‑TAAA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTCGACGatc < 2:524187/151‑1 (MQ=255)
atggg‑T‑AACAAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTCGACGatcatc > 2:1207938/3‑151 (MQ=255)
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GTACCAGATGAGTCGAAGTGTGTATTTTGTGTTAAAAATATGCAAACAAAAGATTAAAGAAATGCCGATCTGATCACGCTCGGCAGAAATCACGCTCTGGATGAACGATGTGCTAAGATGCGGAGACTTAAGGTCAAAAAAACAGAAGGG‑T‑AA‑AAAATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTCGACGATCATC > NC_000913/4031005‑4031299
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
