Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F50 I3 R1
|
105 |
107.9 |
3491495 |
95.1% |
3320411 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,382,351 |
C→T |
intergenic (‑33/‑292) |
frdA ← / → epmA |
anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit/Elongation Factor P Lys34 lysyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,382,351 | 0 | C | T | 99.3%
| 550.1
/ NA
| 142 | intergenic (‑33/‑292) | frdA/epmA | anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit/Elongation Factor P Lys34 lysyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (77/64); total (78/64) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 142 total aligned reads displayed.
CTTTTGAGATTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCCACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCTAAATTATCACT > NC_000913/4382204‑4382498
|
ttttGAGATTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGt > 4:180592/1‑151 (MQ=255)
ttttGAGATTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGt > 1:52438/1‑151 (MQ=255)
ttttGAGATTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGt > 1:94575/1‑151 (MQ=255)
ttGAGATTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTa < 2:789332/150‑1 (MQ=255)
ttGAGATTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTAc > 2:225250/1‑151 (MQ=255)
tGAGATTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTAc < 1:959521/150‑1 (MQ=255)
aTTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTc > 1:67820/1‑149 (MQ=255)
aTTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAg < 1:982611/151‑1 (MQ=255)
tAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACCTTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAggg > 3:8719/1‑151 (MQ=255)
tAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAggg > 1:556830/1‑151 (MQ=255)
tAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAggg > 2:287478/1‑151 (MQ=255)
gCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTa > 2:104157/1‑149 (MQ=255)
gCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTa > 2:587131/1‑149 (MQ=255)
aTTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTAc < 2:148568/151‑1 (MQ=255)
aTTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGGTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTAc > 2:468243/1‑151 (MQ=255)
tGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGa < 1:145604/150‑1 (MQ=255)
aTTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGt > 1:908338/1‑151 (MQ=255)
ggATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACg > 2:1148272/1‑151 (MQ=255)
gATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACg > 3:321799/1‑150 (MQ=255)
aTTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGt > 4:45546/1‑151 (MQ=255)
tttGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCCGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGt > 2:951956/1‑150 (MQ=255)
tttGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGt > 2:1235534/1‑150 (MQ=255)
tGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCt < 1:1144917/150‑1 (MQ=255)
tGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCt < 1:858758/150‑1 (MQ=255)
gCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGc < 2:391852/151‑1 (MQ=255)
gcgcGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGaa < 4:375794/150‑1 (MQ=255)
cgcgGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACg < 2:379219/151‑1 (MQ=255)
ggCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTa < 1:651076/151‑1 (MQ=255)
aaTTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCAc < 4:238327/151‑1 (MQ=255)
aTTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCAc > 4:324713/1‑150 (MQ=255)
aTTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACt < 3:88355/151‑1 (MQ=255)
aTTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACt < 1:432482/151‑1 (MQ=255)
aTTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACt < 1:403154/151‑1 (MQ=255)
aTTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACt < 2:1180740/151‑1 (MQ=255)
ttGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTg > 1:1036160/1‑151 (MQ=255)
cagcaCGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTc < 1:919393/151‑1 (MQ=255)
cagcaCGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTc > 3:377762/1‑151 (MQ=255)
gcaCGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCt < 2:1046887/151‑1 (MQ=255)
gcaCGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCt < 3:130396/151‑1 (MQ=255)
cGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTta < 1:932230/151‑1 (MQ=255)
aaTCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTtat > 1:154704/1‑149 (MQ=255)
aaTCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAg < 4:383023/151‑1 (MQ=255)
aTCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAgg < 1:694654/151‑1 (MQ=255)
cccGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGCAAGGTTTGCACGACATTCCTCCCGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGt > 3:154576/1‑150 (MQ=255)
cccGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGt > 1:117967/1‑150 (MQ=255)
cccGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGt < 3:134555/150‑1 (MQ=255)
cccGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTa < 4:451756/151‑1 (MQ=255)
ccGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTac > 1:84324/1‑151 (MQ=255)
gcgcCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTaca > 1:1031854/1‑150 (MQ=255)
gcgcCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTaca > 1:569670/1‑150 (MQ=255)
gcCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTacaaca < 1:179905/151‑1 (MQ=255)
cACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGt < 2:750275/151‑1 (MQ=255)
ccGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGtat < 4:430179/151‑1 (MQ=255)
cGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGtata < 3:120251/151‑1 (MQ=255)
cGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGAGTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGGACAAAAGta > 1:529008/1‑149 (MQ=255)
ggCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGtat > 1:1026249/1‑149 (MQ=255)
gcCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTc > 2:1212836/1‑150 (MQ=255)
gcCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCt < 3:387267/151‑1 (MQ=255)
gcCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCt > 2:975402/1‑151 (MQ=255)
aTGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGAt > 1:110650/1‑151 (MQ=255)
gCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAg < 2:814368/151‑1 (MQ=255)
aaGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTc < 4:426678/151‑1 (MQ=255)
aTCGGCTTGGAAGGGTTGGAAGCCAATCCTCCAAATTTTTTTTATCCCACACCCACGTTCTTCAGGGAAAGTACCTGAAAGTTACGGTCTGCGAAAGCTATTCCACTGCTCCTTTATAAGTACAACACTATAGTCTGGTGGATaa > 2:27685/1‑145 (MQ=255)
cGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGaaa < 1:624395/151‑1 (MQ=255)
cGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGaa < 3:88008/150‑1 (MQ=255)
ggCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAAt > 1:492143/1‑151 (MQ=255)
cTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAAttt > 2:1104079/1‑151 (MQ=255)
tGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAAttt < 3:281378/149‑1 (MQ=255)
tGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTg > 2:393456/1‑150 (MQ=255)
gAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGa < 2:908162/150‑1 (MQ=255)
gAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGAc > 2:1079898/1‑151 (MQ=255)
aaaGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACg < 2:727379/151‑1 (MQ=255)
aGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACgag < 1:898373/151‑1 (MQ=255)
ggTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTACTTTATAGGTACAACAGTATAGTCTGATGGAGAAGTCTGAAATTTGACgaga < 3:411018/151‑1 (MQ=255)
gTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACg > 1:464818/1‑147 (MQ=255)
gTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACg > 2:699293/1‑147 (MQ=255)
ttGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATc < 2:145420/150‑1 (MQ=255)
ttGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATc < 3:276374/150‑1 (MQ=255)
tGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGATGAGATCg > 1:244504/1‑150 (MQ=255)
gCACGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGAt < 2:500550/151‑1 (MQ=255)
aCGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGAttt > 2:1146721/1‑151 (MQ=255)
cGACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGAtttt > 1:747296/1‑151 (MQ=255)
gACATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGGCTGATGGATAAGTCTGAAATTTGACGAGATCGAttttt > 1:289949/1‑151 (MQ=255)
cATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGAttttttt > 2:810068/1‑151 (MQ=255)
cATTCCTCCAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGAtttttgt < 2:459813/151‑3 (MQ=255)
tcctccAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGt > 2:830203/1‑151 (MQ=255)
tcctccAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGt > 1:1245567/1‑151 (MQ=255)
ccAGATTGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTgcgc > 1:793474/1‑151 (MQ=255)
ttGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAag > 1:1183221/1‑149 (MQ=255)
tGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAagag < 4:353982/150‑1 (MQ=255)
tGTTTTTATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAgg > 1:932121/1‑151 (MQ=255)
tttttATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAggg > 2:904481/1‑150 (MQ=255)
ttttATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCt > 1:519074/1‑151 (MQ=255)
tttATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCt < 4:378709/150‑1 (MQ=255)
ttATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCTa < 3:427919/150‑1 (MQ=255)
ttATCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCTa < 1:587245/150‑1 (MQ=255)
aTCCCACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCTaaa < 2:551207/150‑1 (MQ=255)
cccACAGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCTAAATTa < 2:875957/151‑1 (MQ=255)
caGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCTAAATTATCAc < 3:373784/151‑1 (MQ=255)
aGCTACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCTAAATTATCACt < 2:435374/151‑1 (MQ=255)
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CTTTTGAGATTAGTGCGATTTTTGCATTCGGATTTGCCTGCGCGGCAGCAATTGCAGCACGTAATCCCGCGCCACCGGCGCCTACAATGGCAAGATCGGCTTGAAAGGTTTGCACGACATTCCTCCAGATTGTTTTTATCCCACAGCCACGTACTTCAGGGTAAGTACCTGAAAGTTACGGTCTGCGAACGCTATTCCACTGCTCCTTTATAGGTACAACAGTATAGTCTGATGGATAAGTCTGAAATTTGACGAGATCGATTTTTTTAGTGCGCAAGAGGGCTAAATTATCACT > NC_000913/4382204‑4382498
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
