Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,157,770 A→G T41A (ACT→GCT)  yqhG → DUF3828 family putative periplasmic protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,157,7700AG100.0% 259.8 / NA 72T41A (ACT→GCT) yqhGDUF3828 family putative periplasmic protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (32/40);  total (32/40)

TAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTTGTGATTGTCAGGATTTTGGC  >  NC_000913/3157623‑3157916
                                                                                                                                                   |                                                                                                                                                  
tAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTg                                                                                                                                                 >  1:919611/1‑151 (MQ=255)
 aaaCGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTg                                                                                                                                                 <  2:430201/150‑1 (MQ=255)
 aaaCGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGc                                                                                                                                                >  2:671714/1‑151 (MQ=255)
      cAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCtt                                                                                                                                           <  1:486316/151‑1 (MQ=255)
          ggAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTAttt                                                                                                                                       >  2:1044716/1‑151 (MQ=255)
          ggAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTAttt                                                                                                                                       >  2:613820/1‑151 (MQ=255)
          ggAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTAttt                                                                                                                                       <  2:582719/151‑1 (MQ=255)
           gagaGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTAtttt                                                                                                                                      >  2:493545/1‑151 (MQ=255)
           gagaGGTGAAAAACAGATGAAAATAATACTTCCGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTAtttt                                                                                                                                      <  1:713631/151‑1 (MQ=255)
             gagGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTgg                                                                                                                                    >  2:288791/1‑151 (MQ=255)
               ggTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTg                                                                                                                                  >  2:232308/1‑151 (MQ=255)
               ggTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTg                                                                                                                                  <  2:734360/151‑1 (MQ=255)
                gTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTg                                                                                                                                  >  2:755463/1‑150 (MQ=255)
                 tGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGa                                                                                                                                 >  2:498255/1‑150 (MQ=255)
                  gAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGaaa                                                                                                                               <  2:636121/151‑1 (MQ=255)
                  gAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGaa                                                                                                                                <  2:704506/150‑1 (MQ=255)
                   aaaaaCAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAAc                                                                                                                              <  2:624235/151‑1 (MQ=255)
                     aaaCAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCg                                                                                                                            <  1:715624/151‑1 (MQ=255)
                          gATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGgag                                                                                                                         >  1:100688/1‑149 (MQ=255)
                           aTGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGc                                                                                                                      >  2:104324/1‑151 (MQ=255)
                             gAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCgg                                                                                                                    >  1:151290/1‑151 (MQ=255)
                              aaaaTAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCggg                                                                                                                   <  1:965954/151‑1 (MQ=255)
                                 ataataCTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCg                                                                                                                 >  2:675108/1‑150 (MQ=255)
                                     tccTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATaa                                                                                                             >  1:792308/3‑150 (MQ=255)
                                     taCTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAAc                                                                                                            >  2:381054/1‑151 (MQ=255)
                                      aCTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAAc                                                                                                            <  2:904176/150‑1 (MQ=255)
                                                ttAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGt                                                                                                  >  2:356615/1‑150 (MQ=255)
                                                        ccTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAg                                                                                         <  1:834617/151‑1 (MQ=255)
                                                         cTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAgg                                                                                        >  1:300990/1‑151 (MQ=255)
                                                           ggCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAgg                                                                                        <  2:718562/149‑1 (MQ=255)
                                                                gTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTAc                                                                                 <  1:442808/151‑1 (MQ=255)
                                                                gTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTAc                                                                                 >  1:1030978/1‑151 (MQ=255)
                                                                   ttACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTAcct                                                                               <  2:252395/150‑2 (MQ=255)
                                                                   ttACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCt                                                                              >  1:122972/1‑151 (MQ=255)
                                                                   ttACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCt                                                                              >  2:445518/1‑151 (MQ=255)
                                                                     aCCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTg                                                                             <  1:220171/150‑1 (MQ=255)
                                                                       cGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAAc                                                                          <  2:312628/151‑1 (MQ=255)
                                                                       cGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAAc                                                                          <  1:1010018/151‑1 (MQ=255)
                                                                         tACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACg                                                                         >  2:80188/1‑150 (MQ=255)
                                                                          acacGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGAc                                                                       <  2:339171/151‑1 (MQ=255)
                                                                              gCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATc                                                                   <  2:147360/151‑1 (MQ=255)
                                                                                     cccccTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCt                                                            <  1:333363/151‑1 (MQ=255)
                                                                                     cccccTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCt                                                            <  1:737038/151‑1 (MQ=255)
                                                                                       cccTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGc                                                          >  1:780511/1‑151 (MQ=255)
                                                                                           cacaGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCg                                                        <  1:890196/149‑1 (MQ=255)
                                                                                           cacaGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCGGAACGACAATCTTACGCTGCCgg                                                       <  2:37034/150‑1 (MQ=255)
                                                                                            acaGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGc                                                     >  1:748323/1‑151 (MQ=255)
                                                                                             caGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGc                                                     <  2:444683/150‑1 (MQ=255)
                                                                                                aCCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAata                                                 <  2:344030/151‑1 (MQ=255)
                                                                                                 ccGTAGAACAAACAGTCCGGCATATTTATCAGATCTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTGCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCtata                                                 <  2:378456/150‑1 (MQ=255)
                                                                                                  cGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATAtt                                               <  2:228088/151‑1 (MQ=255)
                                                                                                  cGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATAtt                                               <  2:485669/151‑1 (MQ=255)
                                                                                                  cGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGAGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATAtt                                               <  2:169124/151‑1 (MQ=255)
                                                                                                     aGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATtggc                                            >  2:164417/1‑151 (MQ=255)
                                                                                                      gAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATtggct                                           <  2:796190/151‑1 (MQ=255)
                                                                                                      gAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATtggc                                            >  2:169212/1‑150 (MQ=255)
                                                                                                       aacaaacaGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATtggctg                                          <  1:579980/151‑1 (MQ=255)
                                                                                                        acaaacaGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATtggctgg                                         <  2:28020/151‑1 (MQ=255)
                                                                                                         caaacaGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATtggctggc                                        <  1:517586/151‑1 (MQ=255)
                                                                                                          aaacaGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTggctggct                                       <  1:22079/151‑1 (MQ=255)
                                                                                                              aGTCCGGCATATTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGAt                                   <  2:631839/151‑1 (MQ=255)
                                                                                                                      atatTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATcc                           >  1:333198/1‑151 (MQ=255)
                                                                                                                        atTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCgg                         >  2:833896/1‑151 (MQ=255)
                                                                                                                        atTTATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCg                          <  1:677453/150‑1 (MQ=255)
                                                                                                                         tttATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGt                        >  2:1061201/1‑151 (MQ=255)
                                                                                                                         tttATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGt                        >  2:183163/1‑151 (MQ=255)
                                                                                                                          ttATCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGtt                       >  2:502740/1‑151 (MQ=255)
                                                                                                                            aTCAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTtg                     >  2:752651/1‑151 (MQ=255)
                                                                                                                              cAGAACTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTtgt                    <  1:502754/150‑1 (MQ=255)
                                                                                                                                 aaCTATAAATCAGATGCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTTAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTTGTGAtt                <  2:924937/151‑1 (MQ=255)
                                                                                                                                              aTGCCGCTGCCCCTTATTTTGGTGAAAACGGAGAGCGGGCGATAACTTCTGCGCGAATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTTGGGATTGTCTGGATTTTgg   >  2:88009/1‑151 (MQ=255)
                                                                                                                                                gCCGCTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTTGTGATTGTCAGGATTTTGGc  <  1:726057/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTTGTGATTGTCAGGATTTTGGC  >  NC_000913/3157623‑3157916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A