Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,700,875 |
T→C |
T42A (ACG→GCG) |
acpS ← |
holo‑[acyl‑carrier‑protein] synthase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,700,875 | 0 | T | C | 98.0%
| 367.5
/ ‑4.2
| 100 | T42A (ACG→GCG) | acpS | holo‑[acyl‑carrier‑protein] synthase 1 |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (48/50); total (49/51) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 102 total aligned reads displayed.
AGCCGTAGCCGTGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTCCAGCATC > NC_000913/2700727‑2701019
|
agccgtagccgtGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGctt > 2:599259/1‑151 (MQ=255)
ccgtagccgtGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTc > 3:259442/1‑151 (MQ=255)
ccgtagccgtGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTc < 1:425912/151‑1 (MQ=255)
gccgtGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGAt < 1:449445/151‑1 (MQ=255)
gccgtGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGAt < 2:1327682/151‑1 (MQ=255)
ccgtGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATa < 3:182869/151‑1 (MQ=255)
cgtGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGAt > 4:1523447/1‑149 (MQ=255)
gTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGccc > 4:440498/1‑150 (MQ=255)
gTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCa < 2:339707/151‑1 (MQ=255)
tttGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCAt > 4:1472561/1‑151 (MQ=255)
gCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTc < 4:1684419/150‑1 (MQ=255)
gCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCg < 2:802843/151‑1 (MQ=255)
aGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTAt < 2:741638/151‑1 (MQ=255)
gCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATc > 2:943329/1‑151 (MQ=255)
cTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCg > 4:46514/1‑151 (MQ=255)
atcatTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCtt > 4:1489161/1‑151 (MQ=255)
atTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAAt > 4:1492652/1‑151 (MQ=255)
atTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAAt > 2:69003/1‑151 (MQ=255)
tGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATAc > 2:910678/1‑151 (MQ=255)
taTACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATAcg > 2:1657002/2‑150 (MQ=255)
aaTACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATAcgc < 2:257964/151‑1 (MQ=255)
aTACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATAcgcg > 2:564163/1‑151 (MQ=255)
aCTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACgcggc < 4:933348/151‑1 (MQ=255)
cAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGc < 4:1594143/151‑1 (MQ=255)
cAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACACTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTTCGCTTTCCAGATAGCCCATTCGTTATCTCTTAATACGCGTCGTg > 4:1570755/1‑150 (MQ=255)
aaTTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGcc > 4:1534729/1‑150 (MQ=255)
aaTTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGcc > 2:635693/1‑150 (MQ=255)
aaTTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCa < 4:720392/151‑1 (MQ=255)
aaTTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCa < 2:263204/151‑1 (MQ=255)
aaTTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGGGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGgcgcgc > 2:866102/1‑149 (MQ=255)
tGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAgg < 2:722282/150‑1 (MQ=255)
gATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCg > 4:321261/1‑151 (MQ=255)
aTTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCg > 4:281088/1‑150 (MQ=255)
aTTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCg > 4:1122837/1‑150 (MQ=255)
aaaCGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATc > 2:1640508/1‑150 (MQ=255)
aaCGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCAc < 4:1001511/151‑1 (MQ=255)
cGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCg > 4:535978/1‑151 (MQ=255)
gCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCgg > 4:1491111/1‑151 (MQ=255)
gCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCgg > 4:1594385/1‑151 (MQ=255)
aGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATc > 2:768525/1‑151 (MQ=255)
ttGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCg > 2:210058/1‑150 (MQ=255)
aTCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCg > 4:646803/1‑151 (MQ=255)
tCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGc > 4:1298975/1‑151 (MQ=255)
tCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGc > 1:437848/1‑151 (MQ=255)
tCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGc > 2:384425/1‑151 (MQ=255)
ccGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCtt > 2:583848/1‑151 (MQ=255)
cGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTc < 4:1512571/151‑1 (MQ=255)
ggTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCg > 4:679443/1‑151 (MQ=255)
gCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCTGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATGCGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGAt < 2:1673508/150‑1 (MQ=255)
aaCGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATgcgag < 4:440714/151‑1 (MQ=255)
aaCGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATgcgag < 4:911854/151‑1 (MQ=255)
aCGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATgcgagc < 3:150995/151‑1 (MQ=255)
aCGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATgcgagc < 2:1301770/151‑1 (MQ=255)
aCGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATgcgagc < 2:1425696/151‑1 (MQ=255)
aCGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATgcgagc < 2:1067126/151‑1 (MQ=255)
cGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATgcgagcg < 2:1649859/151‑1 (MQ=255)
ctgttGCTGCGGCTTCTTTCACAGCGAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGCGCGCTTTCCAGATAGCCCAGGCGTTATCGATTAATACTAGGCGTGCCATTCGATCACCGGTTCGGCCGATCACCGCTTCGATgcgagcgtt > 1:360452/4‑149 (MQ=255)
ttttGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGAtc > 3:424216/1‑151 (MQ=255)
tgctgcGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTcc > 4:1023023/1‑151 (MQ=255)
tgctgcGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTcc > 4:888187/1‑151 (MQ=255)
gCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAatat > 1:221515/1‑151 (MQ=255)
tcttTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATct < 2:1679915/150‑2 (MQ=255)
tcttTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCg > 1:7876/1‑151 (MQ=255)
ttCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGt < 4:555961/149‑1 (MQ=255)
aGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTaaa < 4:770824/151‑1 (MQ=255)
aGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTaa > 4:671440/1‑150 (MQ=255)
aaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTa < 4:1636880/151‑1 (MQ=255)
aaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTaa < 2:280642/151‑1 (MQ=255)
cGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGcc < 4:682288/151‑1 (MQ=255)
cGCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGcc > 2:1470303/1‑151 (MQ=255)
gCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGcc > 4:665474/1‑150 (MQ=255)
gCCAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCa < 4:216429/151‑1 (MQ=255)
ccAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCAt > 2:77058/1‑151 (MQ=255)
cAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCAtt < 4:498590/151‑1 (MQ=255)
cAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCAtt > 4:1523484/1‑151 (MQ=255)
cAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCAtt < 1:305900/151‑1 (MQ=255)
cAGAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATAGCCGTGCCTAAACCTAATATTGCCAtt < 2:543946/151‑1 (MQ=255)
gAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCt > 3:44789/1‑131 (MQ=255)
gAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCt < 1:44786/131‑1 (MQ=255)
gAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAg < 4:1331768/151‑1 (MQ=255)
gAAAACGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAg < 2:1096117/151‑1 (MQ=255)
aaaaCGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGc > 1:190963/1‑151 (MQ=255)
aaaaCGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGc < 4:564939/151‑1 (MQ=255)
aaCGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCa < 4:1476674/151‑1 (MQ=255)
aaCGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCa < 4:1145561/151‑1 (MQ=255)
aCGCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCAc > 2:53528/1‑151 (MQ=255)
gCACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCAcgc < 4:384986/151‑1 (MQ=255)
cACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCAcgcg < 4:530827/151‑1 (MQ=255)
cACCGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCAcgcg > 2:1424642/1‑151 (MQ=255)
cGGCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCtt < 3:436487/151‑1 (MQ=255)
ggCGGGTGTTGCGCTTTCCGGATAGCCCATTCGTTATCGCTTAATCCGCGGCGTGCCGGGCGATCACCGGTTCGGGGGATCACGGCTTCGATGCGGGCGATCTCCACAATATCCGTGCCTAAACCTATTTTTCCCA‑TAGCCACGCGCTTcc < 2:1150761/151‑1 (MQ=255)
gCTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTcc < 3:183835/151‑1 (MQ=255)
cTGGTGGTGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTcc > 1:180048/1‑150 (MQ=255)
ggtggtGCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTCCa < 2:44912/149‑1 (MQ=255)
gtggtgCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCCTGCCAGGCGATCATCGTATTTTTTTATTTCCGATTCGAGGCGAGCCACCTCCACAATATCAGTGCCTACCCCTTTTACCGCCAATAGCCCCGCGCCTccc < 2:1683256/148‑2 (MQ=255)
gtggtgCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTCCAGc > 3:256786/1‑150 (MQ=255)
gtggtgCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTCCAGCa < 4:1642512/151‑1 (MQ=255)
gtggtgCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTCCAGCa < 2:1521582/151‑1 (MQ=255)
gtggtgCGCTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTCCAGCa < 4:944552/151‑1 (MQ=255)
gcgcTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTCCAGCATc > 3:300035/1‑148 (MQ=255)
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AGCCGTAGCCGTGGTTTGCCGAGCTCATCATTGAATACTTCAAATTGATTAAACGCCAGACCATTGCGGATCCCGGTGCCAAACGCTTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGCTTCGATGCGAGCGATCTCCACAATATCCGTGCCTAAACCTAATATTGCCATTAGCCACGCGCTTCCAGCATC > NC_000913/2700727‑2701019
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
