Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F50 I3 R1
|
168 |
141.0 |
4346284 |
99.6% |
4328898 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,339,346 |
T→C |
V240V (GTA→GTG) |
mlaF ← |
ABC transporter maintaining OM lipid asymmetry, ATP‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,339,346 | 0 | T | C | 100.0%
| 469.8
/ NA
| 130 | V240V (GTA→GTG) | mlaF | ABC transporter maintaining OM lipid asymmetry, ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/66); total (64/66) |
Only 100 of 130 total aligned reads displayed.
CAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCT > NC_000913/3339198‑3339492
|
aGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCAcg < 2:780305/151‑1 (MQ=255)
ttttAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCAcgcgc < 2:2170336/150‑1 (MQ=255)
ttAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCgg < 2:372188/150‑1 (MQ=255)
aaTCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGAt < 2:509315/150‑1 (MQ=255)
aaTCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATc < 2:893241/151‑1 (MQ=255)
tCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATc > 2:1397114/1‑149 (MQ=255)
cccTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAg < 1:830307/150‑1 (MQ=255)
tttATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGAtt > 2:133571/1‑151 (MQ=255)
tttATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGAtt > 2:239539/1‑151 (MQ=255)
ttATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGAt < 1:391013/149‑1 (MQ=255)
ttATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGAt < 1:255412/149‑1 (MQ=255)
tATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTc < 1:2014150/150‑1 (MQ=255)
tGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGcc > 2:1854429/1‑151 (MQ=255)
tGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGcc > 1:325612/1‑151 (MQ=255)
gTCCTAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCt < 2:2159582/151‑1 (MQ=255)
ccGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGc > 1:1126473/1‑151 (MQ=255)
ccGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGc < 2:1778003/151‑1 (MQ=255)
cGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGc > 2:818250/1‑150 (MQ=255)
aGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAAc < 2:743277/151‑1 (MQ=255)
aGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAAc < 1:2044897/151‑1 (MQ=255)
aGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAAc < 2:1572918/151‑1 (MQ=255)
cGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGc > 1:374442/1‑151 (MQ=255)
gACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGcc > 2:1547391/1‑151 (MQ=255)
cGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTg < 2:710961/151‑1 (MQ=255)
gCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTgg > 1:40419/1‑151 (MQ=255)
ccAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTggg < 1:50152/151‑1 (MQ=255)
cAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGc > 1:2024965/1‑151 (MQ=255)
gcgcATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCAc > 2:1323298/1‑151 (MQ=255)
cgcATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACt < 2:190219/151‑1 (MQ=255)
gcATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTg > 1:1574030/1‑151 (MQ=255)
cATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGc < 1:1625409/151‑1 (MQ=255)
tAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCAt < 2:201122/150‑1 (MQ=255)
tAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCAt < 2:665000/150‑1 (MQ=255)
tAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATg > 1:92238/1‑151 (MQ=255)
tAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAAGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCa > 1:691237/1‑149 (MQ=255)
aCAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATg > 1:1477736/1‑149 (MQ=255)
cAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGc > 2:569566/1‑151 (MQ=255)
cATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGAc > 1:1021715/1‑151 (MQ=255)
tGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACa > 2:1219674/1‑150 (MQ=255)
gTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAttt > 1:1018162/1‑151 (MQ=255)
gTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAtt < 2:715202/150‑1 (MQ=255)
ggCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAttttt < 2:1291999/151‑1 (MQ=255)
ggCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAttttt < 2:1451294/151‑1 (MQ=255)
gCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAtttttt > 2:613560/1‑151 (MQ=255)
gCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAtttttt > 2:538956/1‑151 (MQ=255)
ttAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTg > 2:1671330/1‑151 (MQ=255)
tAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGt > 1:1827970/1‑151 (MQ=255)
aaCTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTc > 1:779992/1‑151 (MQ=255)
aCTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTcc < 2:2063424/151‑1 (MQ=255)
aCTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTcc > 2:1432712/1‑151 (MQ=255)
cccTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCg < 1:92946/149‑1 (MQ=255)
cccTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCg < 1:485134/149‑1 (MQ=255)
ccTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCa < 2:2093224/151‑1 (MQ=255)
cTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTAACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGcc > 1:794443/1‑149 (MQ=255)
tGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCg < 2:862843/146‑1 (MQ=255)
tAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATc > 1:639403/1‑151 (MQ=255)
tAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATc > 2:665638/1‑151 (MQ=255)
aaaaGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATcc < 2:775129/151‑1 (MQ=255)
aaaGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCa < 1:1581221/151‑1 (MQ=255)
aaaGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCa < 2:126325/151‑1 (MQ=255)
aaGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATcc > 1:1187152/1‑149 (MQ=255)
aaGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAg < 2:1751709/151‑1 (MQ=255)
gATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGc < 2:1719591/151‑1 (MQ=255)
aTCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCg > 2:1888038/1‑151 (MQ=255)
aGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGa < 1:1507659/151‑1 (MQ=255)
gTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATcc > 2:123153/1‑151 (MQ=255)
tGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCg > 1:1947486/1‑151 (MQ=255)
gATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATcct < 2:1231022/150‑2 (MQ=255)
aTAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCa < 2:1216377/151‑1 (MQ=255)
aaTCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCaa < 2:42933/150‑1 (MQ=255)
cGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACt > 2:1410500/1‑151 (MQ=255)
gCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAaca < 1:735222/151‑1 (MQ=255)
aGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACt > 2:597710/1‑151 (MQ=255)
ggaacggaacAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGcac > 1:2119908/1‑151 (MQ=255)
gaacggaacAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGcaca < 1:147742/151‑1 (MQ=255)
gaacAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTg > 2:1630496/1‑151 (MQ=255)
cAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTg > 1:655209/1‑148 (MQ=255)
aGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGTTCCGCAATACTTAACACTTCCGGCACATCGTgaga > 2:1877475/1‑150 (MQ=255)
aGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTgaga > 1:1337126/1‑150 (MQ=255)
aGGCCCGTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTgaga > 2:307364/1‑150 (MQ=255)
gTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAaccacc > 2:1271174/1‑151 (MQ=255)
gTCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAaccacc < 2:739606/151‑1 (MQ=255)
tCAGCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAaccacc > 2:64728/1‑150 (MQ=255)
gCTATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcacac > 2:937713/1‑151 (MQ=255)
tATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcacaca > 2:350396/1‑150 (MQ=255)
tATCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGCGAGAAACCACcacaca > 2:273755/1‑150 (MQ=255)
aTCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcacaca > 2:1549349/1‑149 (MQ=255)
tCCCGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGt > 2:219692/1‑151 (MQ=255)
cccGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTc < 2:597596/151‑1 (MQ=255)
ccGTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCa < 2:1703601/151‑1 (MQ=255)
gTCCAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACg < 1:239540/151‑1 (MQ=255)
ccAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGcc > 2:531602/1‑151 (MQ=255)
ccAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGcc > 1:2079388/1‑151 (MQ=255)
cAGAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGccc < 2:2158906/151‑1 (MQ=255)
gAAACTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCa < 1:1643081/150‑1 (MQ=255)
aaaCTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAgc < 1:1323321/151‑1 (MQ=255)
aCTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAgcgc < 2:1278150/151‑1 (MQ=255)
aCTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAgcgc < 1:1397138/151‑1 (MQ=255)
aCTGACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAgcgc > 1:1812222/1‑151 (MQ=255)
gACGCACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCt > 1:624300/1‑151 (MQ=255)
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CAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCT > NC_000913/3339198‑3339492
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
