Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F50 I3 R1
|
168 |
141.0 |
4346284 |
99.6% |
4328898 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,619,262 |
C→T |
A24V (GCC→GTC) |
rhsB → |
Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,619,262 | 0 | C | T | 97.5%
| 356.8
/ ‑5.2
| 121 | A24V (GCC→GTC) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (70/47); minor base G (3/0); total (74/47) |
| Fisher's exact test for biased strand distribution p-value = 2.79e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 |
Only 100 of 121 total aligned reads displayed.
ATTCATTGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCAT > NC_000913/3619114‑3619409
|
aTTCATTGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCg < 1:452861/151‑1 (MQ=255)
ttCATTGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCgg > 2:301945/1‑151 (MQ=255)
cATTGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCgggg < 2:310662/151‑1 (MQ=255)
cATTGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCggg < 1:1863484/150‑1 (MQ=255)
cATTGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCggg < 2:1148581/150‑1 (MQ=255)
tgtgACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTAc > 2:1410290/1‑151 (MQ=255)
gtgACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACg < 1:559687/151‑1 (MQ=255)
tgACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACg > 2:680780/1‑150 (MQ=255)
tgACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGt > 1:311131/1‑151 (MQ=255)
gACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTa < 2:319912/151‑1 (MQ=255)
aCCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTAt < 2:1112664/151‑1 (MQ=255)
cacaAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTg < 1:1024081/151‑1 (MQ=255)
acaAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGGACGTATTgg > 2:1198893/1‑151 (MQ=255)
caAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGt < 2:1864499/151‑1 (MQ=255)
aaGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTg < 2:866233/151‑1 (MQ=255)
aaGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGAATTGTGCAGGGTTCAGTCGGGGTACGTATTGGt > 2:167641/1‑150 (MQ=255)
gTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTTTTTACGGTTCAGTCGGGGGACGCATTGGTGcc > 1:934441/1‑151 (MQ=25)
gTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGGACGTATTGGTGcc > 2:1731368/1‑151 (MQ=255)
tttttCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGccc > 2:1300397/1‑151 (MQ=255)
tttttCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGccc > 1:1866580/1‑151 (MQ=255)
tttttCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGGACGGATTGGTGccc > 1:607535/1‑151 (MQ=255)
ttttCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGGACGTATTGGTGcccc > 2:833035/1‑151 (MQ=255)
tttCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGcccc < 2:273925/150‑1 (MQ=255)
tcttcGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCa < 2:2066455/150‑1 (MQ=255)
cttcGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCAcc > 1:147940/1‑151 (MQ=255)
tcGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGGACGGATTGGTGCCCCCACCgg > 2:2113791/1‑151 (MQ=255)
cTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCg > 1:118872/1‑150 (MQ=255)
tttttCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTg > 2:935475/1‑151 (MQ=255)
ttttCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTg < 2:1492691/150‑1 (MQ=255)
ttttCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAACATTGTTCAGGGGTCAGTCGGGGTACGGATTTGTGCCCCCACCGGCgggg > 2:1479076/1‑151 (MQ=21)
cGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTg < 1:1117883/151‑1 (MQ=255)
cGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGTGGCCt > 2:768946/1‑150 (MQ=255)
aTGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTc < 2:519167/151‑1 (MQ=255)
tGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAACATTGTTCAGGGTTCAGTCGGGGGACGGATTGGTGCCCCCACCGGCGTGGACCGTTCg > 2:775748/1‑151 (MQ=21)
aTACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGtgtg > 1:626481/1‑151 (MQ=255)
tACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTTTTCAGGGTTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGGGGGCTGTTCGGggtg > 1:116579/1‑150 (MQ=18)
gTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGcccc < 2:1219515/150‑1 (MQ=255)
gTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGcccc < 1:1044781/150‑1 (MQ=255)
gTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCcg < 2:628436/151‑1 (MQ=255)
tAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCCGTTCGGTGTGCCCccgcgg > 2:2149687/1‑150 (MQ=255)
aaaaTAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAACATTGTTCAGGGGTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCcggcgg > 2:517298/1‑149 (MQ=255)
aaaaTAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGAAGCAATGTTCAGGGGTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGGGGCCTGTTCGGGGTGCCCccgcgg > 2:141264/1‑149 (MQ=18)
aataatAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGGTCGGGGGGGCCcggggggg > 2:403902/1‑147 (MQ=17)
taataGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAggg > 1:684331/1‑147 (MQ=255)
aataGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCCGTCGGGGTACGTATTTGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCCGCGGGGTGAc > 1:1928612/1‑150 (MQ=255)
ataGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGGCGGGGTACGGATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGGCCCCGCGGGGTg > 2:120007/1‑147 (MQ=255)
ataGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCAATGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCcggcgggggg > 2:1903842/1‑143 (MQ=255)
taGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGGCGGGGTACGGATTGGTGCCCCCACCGGCGTGGCCTGTTCGGGGTGCCCCGGCGGAGTGACGTc > 2:1704052/1‑151 (MQ=255)
aGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTcc < 1:499833/151‑1 (MQ=255)
aGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGGGGGACGTcc > 2:1245470/1‑151 (MQ=255)
gAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGTACGTATTGGGGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGGcc > 1:657180/1‑150 (MQ=255)
aaaaGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCg < 1:2029678/150‑1 (MQ=255)
aaaaGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGGGTGCCCCGGCGGGGGGACGTcc > 2:606892/1‑149 (MQ=255)
aaaaGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCgg > 2:764248/1‑151 (MQ=255)
ggATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCAt < 2:1668671/151‑1 (MQ=255)
aTTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATcc < 2:1591581/151‑1 (MQ=255)
aTTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATcc > 1:1723780/1‑151 (MQ=255)
aTTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATcc > 1:2149581/1‑151 (MQ=255)
tttACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCgg > 2:725191/1‑151 (MQ=255)
tACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGt < 2:1329560/150‑1 (MQ=255)
tACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGGGTGCCCCGGCGGCGGGACGTCCGGCCATCCgg > 2:1804025/1‑149 (MQ=255)
tACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGGCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTTGGGGTGGCCCGGCGGAGTGACGTCCGGCCATCCgg > 1:627137/1‑149 (MQ=255)
aCGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGCAGCATTGTTTAGGGGTTAGTCGGGGTACGGATTGGTGCCCCCCCCGGCGTGGCCCGTTCGGGGTGCCCCGGGGGGGCGACGTCCCGCCATCCGGTc > 2:1984277/1‑150 (MQ=11)
cGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCCTCCGGTCa > 1:968714/1‑150 (MQ=255)
cGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCa > 1:533709/1‑150 (MQ=255)
cGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGGGTGCCCCGGCGGAGTGACGGCCGGCCATcc > 1:942683/1‑145 (MQ=255)
gATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCaa > 1:75550/1‑150 (MQ=255)
gATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGGACGTATTGGTGCCCCCACCGGCGTGGCCTGTTTGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCaa > 1:1439173/1‑150 (MQ=255)
gAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATccc > 1:110397/1‑151 (MQ=255)
gCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCt < 2:1975338/151‑1 (MQ=38)
cGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTg < 1:1182635/151‑1 (MQ=38)
cGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGGGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGGCAATcccc > 1:1781643/1‑149 (MQ=255)
ggAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGc < 2:1830296/151‑1 (MQ=38)
aaaaCCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTc > 1:2005207/1‑151 (MQ=38)
aaaaCCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTc < 2:1080461/151‑1 (MQ=38)
aaCCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCgg < 2:1316368/151‑1 (MQ=38)
ggcggcGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCa < 2:653691/151‑1 (MQ=38)
cggcgCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCaaa < 2:780822/151‑1 (MQ=37)
cgTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGGGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTcc > 2:1744506/1‑151 (MQ=25)
cgTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCCGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTcc > 1:1613093/1‑151 (MQ=25)
aGGGTGACATGACGCAGTATGGCGGTAGCATTTTTCAGGGGTCAGTCGGGGTACGTATTTGTGTCCCCACCCGCGTGGCCTGTTCGGTGTGCCCCCGCGGAGTGACGGCCCGCCATCCCGGCAATCCCCCGCTTGGTGCAAAGGACCTTcc > 1:1016542/1‑151 (MQ=11)
aGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGGCAATCCCCTGCTCGGGGCAAAGGGCCTTcc > 1:2133428/1‑151 (MQ=255)
ggTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCg < 2:2078638/151‑1 (MQ=25)
gACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGt < 2:436252/150‑1 (MQ=18)
gACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTg < 1:1321992/151‑1 (MQ=18)
gACGCAGTATGGCGGTAGCATTGTTCAGGGGTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGGGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAAcc > 2:1889544/1‑151 (MQ=16)
cGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGa < 1:660719/151‑1 (MQ=18)
gCAGTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGAc < 2:118872/151‑1 (MQ=18)
gTATGGCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATc < 1:1151612/151‑1 (MQ=18)
gCGGTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCt < 1:94036/151‑1 (MQ=18)
ggTAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTgc < 1:906672/151‑1 (MQ=18)
tAGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTgccc > 2:1844463/1‑151 (MQ=18)
aGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTgcccg < 2:834809/151‑1 (MQ=18)
aGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTgccc < 2:311130/150‑1 (MQ=18)
aGCATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTgccc < 2:195642/150‑1 (MQ=18)
cATTGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTgcccggc < 1:90498/151‑1 (MQ=18)
tGTTCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTgcccggccc < 2:621327/150‑1 (MQ=18)
ttCAGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGc > 1:1380053/1‑150 (MQ=18)
aGGGTTCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGcc > 2:1662805/1‑151 (MQ=18)
tCAGTCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTc > 1:1095941/1‑150 (MQ=18)
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ATTCATTGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCAT > NC_000913/3619114‑3619409
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
